Geotrypetes seraphini (Gaboon caecilian): 117347983
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Entry
117347983 CDS
T09159
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1 isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117347983 (TRPM1)
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117347983 (TRPM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
YVC1_C
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
117347983
NCBI-ProteinID:
XP_033775415
UniProt:
A0A6P8P368
LinkDB
All DBs
Position
14:39020118..39203050
Genome browser
AA seq
1656 aa
AA seq
DB search
MRNPGGREKGDLLCQETEVQCQKTWLEKTFSKRECIYIVANNKDTSRCCCGQVITQHVPV
SQNITNKTGEDTKQLEKPSEKWSIAKHTQTSPTDAYGILEFQGGGHSNKAMYIRVSYDTK
PDLLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLVKAATTTGAWIFTGGV
STGIVRHVGDALKDHSSKSRGRIYAIGIASWGIVENKEDLIGRDVTKPYQTMSNPLSKLS
VLNNTHTHFILADNGTIGKYEAEVKLRRQLEKHISLQKINTRLGQGVPLVTLIAEGGPNV
ISIVRECLQEVPPVPVVICDGSGRASDILSFAHKYSEEAGIISESLRDQLLVTIQKTFNY
TRNQSHQLFTILMECMKKKELITVFRMGSEGQQDIEMAILTALLKGTNASAPDQLSLALA
WNRVDIARSQIFVFGHHWPPLGSLTATSGSAKDKGKRSPAVQNKVTRGKGKWKKKGKGKD
DPGEETDPRKIELLNWVNSLEQAMMDALVLDRVDFVKLLIENGVSMQRFLTIPRLEELYN
TRLGPPNTLHYLVRDVKKGNLPPDYHVSLIDIGLVLEYLMGGAYRCYYTRKTFRTLYNHL
FGPKRPKALKLLGMEDDEPPTKGKRKRKKKEEEIDIDVDDPEVGSFQYPFHELMVWAVLM
KRQKMALFLWQRGEEALAKALVACKLYKSMAHESSENVAVDDISQDLDNNSKDFGQLAVE
LLDQSYKHDEQVAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRLR
MRKNPGLKVIMGILFPPTILFLEFRSQDDPSYQTSKENEDGKEKEEDNTDVDTGSRKGDE
ENRNRKQKGIPIGTKIYEFYNAPIVKFWFYTIAYLWYLMLFNYVVLVKMERWPSIQEWIV
ISYILTLGIEKVREILMSEPGKLSQKVKVWLQEYWNITDLVAISMFIIGAILRLQNEPYM
GYGRVIYCVDIIIWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVIIMLVVLMSFGVAR
QAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQIDLYAMEINPPCGENLYDDDGKRLPP
CIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHDR
PVLPPPMIIFSHLYIIIKSICCRFKKKQEGEQDERDRGLKLFLNDEELKKLYEFEEQCVE
EYFQEKEDEQQSSNDERIRVTSERVENMSMRLEEVNEREHFMKASLQTVDLRLSQLEELS
GRMVTALEKLVGIDKSELIRSYSRASSECDATYLLRQSSINSSEGYSIYKYHVEGEEATC
DESTSSMSPALGMRRKAHSFGMKAENTAIEQKMQLVPECQGSLCYASSANIVVPQDYGKT
TLAIVPHMTRPRSCLDTYDISFYDKHENSNNNNLNSTKQTDIIINGKSVRTGTTSDISNN
QLTVERTKLEATTSYPLEKSKAIQYYPEQSFSTCQASVTRSRSFIFSHAGKFIGGDNKWT
AEYSSIMNQVCPTTVERWSSQWNDKAQETISHGQSPELLSDAYEAEMQLEQMSRLRNTEN
SSSFGKIGINSAYPSTFLTGNPRTEILMKSDSQGTCEFPHARSKSLHSHSQKPKSIVDKL
ETSRYAKNVMSIVVACGSATEEQKATCEIVSTETES
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacccaggagggagagagaagggagatcttctctgccaggaaacagaagtgcag
tgtcaaaagacttggttggaaaagaccttttctaaacgtgaatgcatctacatagttgcc
aacaataaagacacaagcaggtgttgctgtggtcaggtcatcactcagcatgttcctgtt
tctcaaaatataacaaacaaaactggggaggatacgaagcaactggaaaaaccctctgaa
aagtggtcaattgctaaacacacccagaccagtccaacagatgcctatggaatcctggag
ttccaaggaggtggacattcaaacaaagcaatgtatattcgtgtatcctatgatacaaaa
ccagacttgctgcttcatctcatggtaaaagattggcaattggagctgccaaagcttcta
atatcagtccacggaggtctccagaactttgagatgcagcccaagctgaagcaggtattt
ggaaaaggtttagtcaaggcagccacgacaacaggagcctggatatttactggtggagtc
agtacaggtatcgttcgccatgtgggagatgccttgaaagatcattcttccaagtccaga
gggcgaatttatgccataggaattgcatcatggggcatcgtagagaacaaagaagatctt
attggaagagatgtgacaaaaccttatcaaactatgtcaaatcctctgagtaaactctcc
gtgcttaacaacactcacacgcatttcatcttagctgataatggcaccatcggtaaatat
gaagctgaggttaaattacggcgccaactagaaaaacatatctctttgcaaaaaatcaac
acacgactgggacagggtgtacctctagttacactcattgctgaagggggcccgaacgtg
atatctattgtccgggaatgtctgcaagaagtgcctccagttcctgtggtgatttgtgat
ggtagcggacgtgcatcagatattctgtcgtttgcacacaagtactctgaagaggcaggg
ataatcagtgaatccctccgtgatcagctgcttgtcactattcagaaaacatttaattat
acccgaaaccaatcccatcagctatttactattctcatggaatgtatgaagaagaaagag
ctgattactgtgttccgcatgggttctgaaggacaacaagacatagagatggctatttta
acagctttactcaaaggtacaaacgcttctgcaccagaccagttgagcttggcattagcc
tggaaccgtgtcgacatagctcgtagccaaatctttgtctttgggcatcactggccgcct
ttaggaagccttacagctacttctggctcagcaaaagacaaaggaaagcgatctcctgcc
gtacagaataaagtcactagaggaaaaggaaaatggaagaagaaagggaaaggaaaagat
gatccaggtgaagaaactgatccaaggaagattgaattgctgaactgggtgaattccctg
gagcaggcaatgatggatgctctggtcctggatcgtgtagattttgtgaaacttctcata
gagaatggagtgagcatgcaaaggtttctcaccattcctcgcctagaagaactgtataat
actaggctgggacctcctaatactctacactatctggttagagatgtgaagaagggaaat
cttccaccagattatcacgtcagcctgattgacattggtcttgtgcttgaatacctcatg
ggtggggcctatcgctgttactatactcgaaagacattccgtactctttacaatcactta
tttggaccaaagaggccgaaagctcttaaactgctaggaatggaggatgatgaacctcct
actaaaggaaagagaaagaggaagaaaaaagaagaagaaattgatattgatgtagatgat
ccagaggtcggcagctttcagtaccctttccatgagttgatggtgtgggcagtgttgatg
aaacgtcaaaagatggcactctttctttggcaacgaggggaggaggccctggcaaaagca
cttgtggcttgcaaactttacaaatctatggctcatgaatcttcagaaaatgtggctgta
gatgacatctcacaggatctggacaacaattcaaaggattttggtcagctggctgttgag
ttgttggaccagtcttacaaacacgatgaacaagtagccatgaagctcttgacctacgag
ctgaagaactggagcaactccacttgtctaaaactcgctgtggctgctaaacacagggat
tttatagcacacacttgcagccagatgctgctaacagacatgtggatgggacggcttcgc
atgcggaaaaatccaggcctcaaggtgattatgggaattctatttccaccaaccatcctg
ttcctggagtttcgttcccaggatgacccttcctatcaaacatcgaaagagaatgaagat
gggaaagaaaaagaggaggataacacagatgttgacactggctcgagaaagggggatgaa
gaaaacagaaacagaaaacagaagggtattccaattggaaccaaaatctatgaattctat
aatgctcctattgtaaagttctggttttatacaatagcttatctgtggtacttaatgcta
ttcaattatgtggttctggtgaagatggaacgctggccatctatacaagaatggattgtc
atttcttatatcctgactctagggatagagaaagtgagagagattttgatgtcagaacca
ggcaagctgagccagaaagtaaaagtctggcttcaggaatattggaatatcacagatctt
gtagctatttcaatgttcataattggagcaattcttcgcctccagaatgagccctatatg
ggctatggaagagtcatctactgtgttgatatcatcatttggtacattagagtactagac
atctttggtgtaaacaagtacctgggaccttatgtcatgatgattggaaagatgatgatt
gacatgctctactttgtgatcatcatgcttgtggtactgatgagcttcggcgtggctcgt
caagccatcctgcacccagatgaggagccctcgtggagacttgctcgcaacatattctac
atgccatactggatgatctatggagaggtgtttgcagaccagatagacctgtatgccatg
gaaattaatcctccatgtggggaaaatctatatgatgacgatggtaagcgcttgcctcct
tgcattcctggggcctggctaacaccagccattatggcgtgttacctcttggtagcaaat
atccttctagtaaacctgctgattgctgttttcaacaatactttctttgaagtgaagtca
atttcaaaccaagtttggaagttccagcgatatcagctgataatgacatttcatgataga
cctgttctacctccacccatgattatcttcagccacctctatatcattataaaatctatt
tgttgtcgcttcaagaaaaaacaggaaggggaacaagatgaacgagatcggggactgaaa
ttatttctcaatgatgaagagctgaagaaactgtatgaatttgaagagcaatgtgtagag
gaatattttcaagaaaaagaggatgaacaacagtcatccaatgatgaacgaattagggtt
acatctgaaagagttgaaaacatgtctatgaggctagaagaagtgaatgaaagagaacac
ttcatgaaagcttctcttcaaactgtagaccttcgcctctctcaactggaagagctatca
ggtcgaatggttactgcactggaaaagctagtaggaatagacaaatcagagctgatacgt
tcatactccagagcatcctcagaatgtgatgcaacttatctcctgagacaaagcagcatc
aacagctctgaaggctacagtatatataagtatcatgttgaaggagaggaggcaacatgc
gatgaaagcacaagttccatgtcaccagcgttaggaatgcgtagaaaagcccattcattt
ggtatgaaggcagagaatactgctatagagcagaaaatgcaactagttccagagtgccaa
ggaagtctctgctatgcctcaagcgcaaatatagttgttccacaagattatggtaaaacc
actttagccattgtaccacatatgacaaggcctagatcctgtttagatacatatgatatt
tcattctatgacaagcatgagaattcaaacaataacaacctaaattctacaaagcaaact
gatatcattattaatggaaagtctgttagaacagggacaacatcagacatctcaaataac
caactaacagtagaaaggacaaagttagaagcaactacttcttatcctttggaaaagtct
aaggcaatacaatattaccccgaacaatcctttagcacttgtcaggcaagtgtgactcgg
tctagaagttttatattttcccatgctgggaagtttattggtggagataataaatggact
gcagaatatagttctattatgaatcaagtgtgtccaactacagtggaaagatggagtagt
caatggaatgataaagctcaagaaacaatttctcatggtcaaagtccagaacttcttagt
gatgcatatgaagctgaaatgcaattggaacagatgtcacggttgagaaacacagaaaat
agcagtagctttggtaaaataggtatcaactctgcttatccttctacatttctcactggc
aaccccaggactgaaattttaatgaagtctgactcacaaggaacatgtgaatttccacat
gcaagatctaaaagtttgcatagccactctcaaaaacccaagtccattgtagataaatta
gagacgtcaagatatgctaagaatgtaatgagcatagtggtggcatgtggaagtgcaact
gaggagcaaaaggcaacctgtgaaattgtctctacagaaactgagtcctag
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integrated database retrieval system
