Geotrypetes seraphini (Gaboon caecilian): 117348021
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Entry
117348021 CDS
T09159
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117348021 (LINGO1)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117348021 (LINGO1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
LRR_RPS2
LRRNT
Motif
Other DBs
NCBI-GeneID:
117348021
NCBI-ProteinID:
XP_033775491
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Position
14:51307594..53092844
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AA seq
639 aa
AA seq
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MHRCSWPSREPAAGTFDTGGTRVKYRMIAGEVSMHNPILACWQPILLLVLGSILSGSATG
CPPRCECSAQERSVLCHRKRFMAVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELE
LNENIISTIEPGAFYNLLNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY
MFQDLYNLKSLEVGDNDLVYISQRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR
LRHLNINAIRDYSFKRLYRLKILEISQWPYLDTMTSNCLYGLNLTSLSIANCNLTSVPYV
AVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIHLVGGQLTTVEPYAFRGLNHLRILN
VSGNLLTTLEESTFHSVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKHQPTCNTPEY
VQGKEFKDFPDVLLPNYFTCRRAKIRDRKQQQIYVDEGHTVHFVCRADGDPPPAIMWQSP
RKHVISSKTNGRLTVFPDGTLEVRYAQIQDHGTYLCIASNAGGNDTVLAHLHVRSYSPDW
PHQPNKTFAFMSNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFL
WSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMM
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcacagatgctcatggcccagtagagaaccagcggcaggcactttcgacactggtggc
acacgggtgaaatataggatgatcgctggggaggtgagcatgcataacccaatcttggcc
tgctggcagccgatcctcctcctggttctgggatccatcctatcgggttctgctaccggt
tgcccgccacgttgcgagtgctctgcccaggagcgttctgtgttgtgccatcgaaagaga
tttatggctgttcctgagggcattccaactgagacacggctattggacttgggcaaaaac
cggatcaaaaccctcaaccaggatgagtttgccaactaccctcacttggaagagttggag
ctgaatgaaaacatcatcagcaccattgaacctggggctttctacaatctcctcaacctt
aggactctgggtctacggagcaacaggctcaaactgatcccactgggggtgtttactggg
ctgagcaatcttaccaagctggacattagtgagaataagattgttatacttttggactac
atgttccaggacctgtacaatctgaagtccttggaagtgggagacaatgatctggtctac
atatcccagcgagctttcagtggtctcaacagtttggaacagctgaccttagagaaatgc
aacttgacctccatcccaacagaggcactatctcacctgcatggtctgattgtgttgagg
cttcgccatttaaatattaatgccattagggactattcctttaagagactgtacaggctt
aaaatcctcgagatatctcaatggccctatttggataccatgacatccaattgtctttat
ggactcaacctgacttccttatcaattgccaattgtaatctaacttccgttccttatgtg
gctgtgaggcacttagtatatctcagattccttaatttgtcctataatcccatcgttacc
attgaaggatccatgctacacgatctgctcagactgcaagagatccatctagttggtgga
cagctcactacggtagagccctatgctttccgtggtctcaaccacttgcgtattcttaat
gtatctggtaacctcctgaccactttagaggagtcaactttccattctgttggaaacctt
gagacacttattttggataacaatcccttggcctgtgattgccggctgctttgggtcttc
cgccgtcgttggaggttgaacttcaacaagcatcagcctacctgcaacacccctgaatat
gttcagggcaaagagtttaaagatttccccgatgtgcttcttcccaactatttcacttgc
cgccgtgcaaagatacgagaccgaaaacagcaacagatctatgtggatgaagggcataca
gtgcattttgtttgtcgggcagatggtgatccaccccctgccatcatgtggcagtcccca
aggaagcacgtcatctccagcaaaaccaatgggcgcctcactgtcttccctgatggcacc
ctggaggtgcgctatgcccagatccaagaccacggtacatacctatgcattgctagtaat
gctgggggaaatgatacagtccttgcccacttgcatgttcgaagctactctcctgactgg
ccccaccaaccaaacaaaacctttgctttcatgtctaaccagcccaatgaaagcgatgcc
aacagtacacgtgccactgtgcctttcccctttgacatcaagactctaattatcgccact
accatgggatttatctcattccttggggtagtgttgttctgcttggtgctcctgtttctg
tggagtagggggaaaggtaacacaaagcataacattgaaattgagtacgttccacgcaag
tcggatgcaggaataagctctgctgatgcccctcggaaattcaacatgaaaatgatgtaa
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