Geotrypetes seraphini (Gaboon caecilian): 117348049
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Entry
117348049 CDS
T09159
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117348049 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117348049 (MYO5C)
04131 Membrane trafficking [BR:
gsh04131
]
117348049 (MYO5C)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117348049 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117348049 (MYO5C)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117348049 (MYO5C)
mRNA cycle factors
P-body specific factors
117348049 (MYO5C)
Membrane trafficking [BR:
gsh04131
]
Others
Actin-binding proteins
Myosins
117348049 (MYO5C)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117348049 (MYO5C)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117348049 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
117348049
NCBI-ProteinID:
XP_033775566
UniProt:
A0A6P8PIS7
LinkDB
All DBs
Position
14:17009989..17203047
Genome browser
AA seq
1762 aa
AA seq
DB search
METPVAAFSGEETKRCKKYNRVWIPDPDEVWKSAEIRKDYKPGDGVLHLYLEDGTEMAYL
VDPANQILPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAIN
PYKELPIYGDAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTV
SARYAMRYFATVSKSSSRAHVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKR
YQIIGANMRTYLLEKSRVVFQSENERNYHIFYQLCAFAKQPEFKHLNLASADEFNYTAMG
SSTDIEGVDDRADMIETQKTFSLLGLKEDFQMDVFKVLAAILHLGNVHIKSVSDEKSSVG
GSDKHLKIFCDLLDLDVEKVAQWLCNRKIITTSDTVIKPMTKLQATNARDALAKKIYSHL
FDFIIERINTALQFSGKQHTFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNMGASM
PISAEHVFKLEQEEYMKEDIPWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPQGTDEN
WLQKLYNNYIDKNPLFEKPRMSNRAFIIQHFADKVEYQCDGFLEKNRDTVYEVLIDILKD
SKFHLCANVFQESTAPIPALGVGIKVKSAKPVIKSVNKQFRLTVGSKFRSSLSLLMETLN
ATTPHYVRCIKPNDDKLPFEYDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFFGRYS
ILMTQQELLSNDKKQICKTVLQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDKLRNAC
VMIQKNMRGWVQRKKFHRARLAAIIIQQYFRGQRAVRQAISARALKHAWAAIIIQKYARG
FLVRRLYQLILVATLTIQAFTRGYLARKKYRKMLEEHKALILQKYARAWLARRRFQSIRR
FVINIQLSYRVQRLQKKIEDQNKENHGLLERLTTLASTHANDMDKLHKLEAELEKLTAQR
KAQEEKTKKYKDDAEQKIAKLQAENSELQKQKEHLGKQLQDKTQEMKDKMDDLTKQLFAD
VEKEERQRILLEKRFEIEKQDYEKQTKSLKEEIKSVKSENIHLQHQLEEERLTNDGLKLE
VSELTKEVKTISSLQKEIVLLETQKLDMEKQVQLQKREMRERMSDVTKQLLDSFEVADVK
NRMASEDLEHLNEDGELWFAYEGLKKATRVLESHFQSQKENYEKEIEVQNYKVEHLSQEI
SHLQKLFREENNMNDSIREEVTRLRSENMIIPDLKQQISELQRQKTDLQNHLKVQAEEIE
GKMERISNQLHHDLEEEGSQRKTLEVQKEKFKVENEELAAKVQEVEAVNVHLKKKHEVES
EIKNKMMQEASRLSTENTDFEEQLDMKDRLIKKLQDQIKALTKTIEKATEVQVPTVAKEY
SGMLEYVQEDEAKLIQNLILDLKPRGVVVNMIPGLPAHLLFMCVRYTDHLNEADRLKSLM
NATITGIKEVIKSHVDDFELLSFWLSNTFHFLNCLKQYSGEEEFMKHNTPQQNKNCLKNF
DLSEYRQVLSDLAIRIYHQFITVMENNIQPMIVPGMLEYESLQGISGVKPTGFRKRSSSI
DDTDSYTITSILQQLSYFYSTICQHGMDPELVKQAVKQLFFLIGAVTLNSLFLRKDMCSC
RKGMQIRCNISYLEEWLKDKNLQGGTAKETLEPLSQAAWLLQVKKVTDDDAKEICERCVC
ISTVQIVKILNSYTPIDDFEKRVAPSFVRKVQSKLSNREDAPQLMLDSKYLFQVTFPFSP
SPHALEGIQIPSSLKLGFLTRL
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacctgttgctgctttcagtggagaagaaactaaaaggtgtaagaagtacaat
agggtctggatccctgatcctgatgaagtctggaaatcagctgaaatcagaaaagattat
aaacctggagacggagtccttcatttgtatttggaagatggaacagaaatggcatatttg
gtggatccagcaaaccaaattcttcctccattaaggaaccctgacatccttgtaggtgaa
aatgacctgacagcactcagctacctccatgagcctgctgtactgcacaacctgaaagtc
cgctttgtggagtccaaacttatctacacctatagtggaattattttggttgccattaat
ccctacaaagagttaccaatatatggcgatgcaattatccatgcatacagtggacaaaat
atgggagatatggatccacatatctttgctgtggcagaagaagcttataagcagatggcc
aggaacaacagaaatcagtccattatagtcagtggagagtcgggagcggggaagacggtg
tctgctaggtatgctatgcgttactttgccacagtcagtaaatcgagcagcagagcccat
gtggaagataaagtactagcatccaatccaattacagaggctataggcaatgctaagacc
acccgaaatgacaacagtagtcggtttgggaagtatactgaaattagttttgataagaga
tatcagatcattggagcaaatatgagaacatacctgcttgagaaatccagggtggttttt
cagtctgagaatgaaaggaattaccatatcttctatcagctctgtgcatttgcaaaacaa
ccagaattcaagcatcttaacctggcgagcgcagatgaatttaattatacagcaatgggg
agcagtacggatatcgaaggcgttgatgacagggctgacatgattgaaactcagaaaaca
ttttccttgctcggcttaaaggaagacttccagatggatgtttttaaagtgttggcggcc
atccttcatttagggaacgtgcatatcaaaagtgtcagtgatgaaaagtcttctgttggt
gggagtgataagcacttgaaaatattctgtgaccttctggatctagatgttgagaaagtg
gcacagtggctgtgcaaccgaaagattataactacctcggacactgtaataaaacccatg
actaaacttcaggcaactaatgcaagggatgcactggccaagaagatatattctcactta
tttgactttataatagagagaataaacacggctttgcagttttctggcaaacagcacact
ttcattggtgtcctggatatatacggatttgaaacatttgaagtgaacagttttgaacaa
ttttgcatcaactatgcaaatgaaaaactgcaacaacagtttaacatgggtgccagtatg
ccgatttcagcagagcacgtctttaaacttgaacaagaagagtacatgaaggaagacatt
ccctggactctgatcgatttttatgacaatcagccagtcattgaccttattgaagctaag
atgggaattttggagttacttgatgaggagtgcttgttgccacagggaacagatgagaat
tggcttcagaagctctataataactacatcgacaagaatccactatttgaaaagcccaga
atgtcaaacagggcatttatcattcagcattttgctgataaagtagagtatcagtgcgat
gggtttctggagaagaacagagacacggtctatgaagtgctgattgacatcttaaaagac
agtaagttccatctctgtgcaaatgtttttcaagaaagtacagctccgatacctgcactt
ggcgttggtataaaagtcaaatctgcaaaacctgtgatcaagtctgtaaacaaacaattc
cgcttgacggtcgggagcaagttccgcagttccttgtctttacttatggaaacacttaat
gcgaccacgcctcactatgtcagatgcataaagcccaatgatgacaagcttccatttgaa
tatgactccagaagagttgttcagcagctccgagcatgtggggttctggagactatccgg
atcagtgcacagagctatccatccaggtggacatacattgaattttttggccgttatagc
attctcatgactcagcaagagcttttgtctaatgacaagaaacagatttgcaagactgtg
ttgcagaggctaattcaagatcctaaccagtatcaatttggaagaaccaaaatcttcttt
agagcaggccaggttgcatatttggagaaactccgatcggataaattaaggaatgcgtgt
gttatgatccaaaagaacatgcgtggctgggtccagaggaagaagtttcatcgtgctagg
ctagctgcaattataattcagcagtacttccggggacagcgggctgtgcgacaagccata
agtgcaagggctttaaagcatgcatgggcagctataatcattcagaagtatgcgcgtgga
ttcctcgtccgtcggctttaccagctcatccttgtggctactttaacaatacaggcgttt
actcggggctatttggcaaggaaaaaatatcgaaagatgctggaggaacacaaggcttta
atactacagaagtatgcccgagcatggttggctagacgcagatttcagagcattcgccgc
ttcgtgataaacattcagctttcctatagggtacaacggttgcagaagaagattgaggat
cagaataaagaaaatcatggcttactggaaagactcaccaccctagcatcaactcatgcc
aatgatatggacaaactgcacaaacttgaagcagagcttgaaaaacttactgcacaaaga
aaagcacaagaagaaaaaacgaagaagtataaggatgatgcagagcagaaaatagcaaaa
cttcaagcagaaaattcagagctgcagaaacagaaagagcacctaggaaaacagctgcaa
gacaagactcaggaaatgaaagataaaatggatgacctcacaaaacaactatttgctgat
gttgaaaaggaggagcgacaaagaatcttactagagaaacgatttgaaatagagaaacaa
gattatgaaaagcaaaccaagtcattgaaagaagagattaaatctgtgaagtctgaaaac
attcatcttcagcaccagcttgaagaggagcgtctcacaaatgatggtttaaaactggaa
gtgtctgagcttacgaaagaggtcaagacaatatctagcttgcagaaagagatcgtcctt
ctggagacacagaaactagacatggaaaaacaagtccagttacaaaagcgtgaaatgaga
gagaggatgtcagatgttacaaaacaacttctggacagtttcgaagtggcagatgttaaa
aataggatggcttcagaggatttggagcatttgaatgaagatggagaactttggtttgct
tatgaaggtcttaaaaaagcaaccagagtgttggagagccatttccagtctcagaaagag
aactacgaaaaggaaattgaagttcaaaattataaagttgaacatcttagccaggaaatc
agccatctacaaaaattgtttcgagaggaaaacaacatgaatgatagcatccgagaagaa
gtgactagactgagatcagagaacatgataattccagacctcaaacagcaaatttctgaa
ctgcagcgacaaaaaactgatcttcaaaaccacctaaaagtgcaagccgaagaaatcgaa
ggaaaaatggaaagaatttcaaatcaattgcatcatgatcttgaagaagaaggatcccaa
aggaagactttggaagtccagaaggaaaaatttaaagtggaaaatgaggaacttgctgct
aaagttcaagaggtagaggcagtgaatgttcatttaaagaaaaagcatgaagtggagagt
gaaataaagaataagatgatgcaggaggcatctcgtctgagcacggaaaacacggatttt
gaagagcagctcgacatgaaagatagactgataaagaagttgcaagaccagataaaggct
ctgacaaaaaccattgaaaaagccactgaagttcaagtgccaactgtggcaaaggaatat
tctggaatgctggaatatgtgcaggaggatgaagcaaaactcattcaaaatcttatccta
gatctaaagcctcgtggtgttgttgtgaatatgatccctggcctacctgcacacttgctc
ttcatgtgtgtgagatacacagatcacctgaatgaggctgacaggctgaaatccttaatg
aatgccactattactggaattaaagaagttattaagagtcacgttgatgattttgagttg
ttgtcattctggctttcaaacaccttccattttcttaattgtttgaagcagtacagtggg
gaggaggaattcatgaagcataacactccccagcagaacaagaactgcttaaagaatttt
gacctgtcagaatacagacaggttctcagtgacttggccatacgtatctatcatcagttc
attactgttatggaaaacaacattcagccaatgatagtacctggcatgcttgagtatgaa
agtctccaagggatctctggtgtgaagcctacaggattccgcaaacgttcttctagcatc
gatgacacagattcgtacaccattacttccatcctgcagcagctcagttatttttacagc
acaatttgtcagcacggcatggacccggagcttgtcaaacaggcagtcaagcagctcttc
tttttgatcggagcagtcactctgaacagcctcttcctccgtaaagacatgtgttcttgt
agaaaaggaatgcagataaggtgtaatatcagttacttggaagaatggctgaaagacaaa
aacttgcagggcggcactgccaaggaaaccttggaacccctctcgcaggccgcctggctg
cttcaggtgaaaaaggtcaccgatgatgatgccaaggaaatatgtgagcgttgtgtttgc
atttctactgtgcagatagtaaaaatcctgaattcatacaccccaatagatgactttgaa
aagcgagtagcaccatcatttgtacgcaaagttcagtctaagttaagcaatcgagaagat
gccccccagctgatgctagatagcaaatacctctttcaagtgacatttccattcagccct
tcaccacacgccctggaagggatccaaatccccagcagtctcaagcttggcttcttaaca
agactgtaa
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integrated database retrieval system
