Geotrypetes seraphini (Gaboon caecilian): 117348085
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Entry
117348085 CDS
T09159
Symbol
LRRC49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gsh03037
]
117348085 (LRRC49)
04812 Cytoskeleton proteins [BR:
gsh04812
]
117348085 (LRRC49)
Cilium and associated proteins [BR:
gsh03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
117348085 (LRRC49)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
117348085 (LRRC49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
LRR_LRWD1
LRR_EndoS
Tubby_C_like
Motif
Other DBs
NCBI-GeneID:
117348085
NCBI-ProteinID:
XP_033775646
UniProt:
A0A6P8NI91
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Position
14:41740074..42002635
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AA seq
763 aa
AA seq
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MQPNKYRGRLTPNTVNSCGSQLVFHPPVLEKNKQYEFKLSKEQPTLYYRIFLHDLEKNSA
VRQGDARLSSPLVRTRQTPSAATVVEMFATELKHGLDSLPLGASGEINPITSVKSRSRSA
SHRSVLNVSKNQGDICFGKGDHTSCYIRGKKGGFPVVQRSAEEKIANPDLLNLERQNLAA
CPVIEGEEQLRLLNLQHNFITQMQNLGNLRRLIFLDLFNNQIEEIGGISSLFSLRVLMLG
SNRIKKISNLESLENLDILDLHGNQITKIENVSHLSELRVLNLARNSINQVENLSGLKSL
VELNLRNNQINYVRDVDTLPNLQRLHLSFNSISCFEDILCLADSSSIADVTLDGNPIAQE
PWYKQTILGHMLQLRQLDMKRITEEERRTASLLARREEEKKRESHKQALLKEKKRLAIYN
AARQWEKQQNRVVHIPGSKHDQKDYDSTSHKPCPIDGNAHAVSEENRSLDTVLNSALQGL
SVIDSHFVELEGDTLYLYGSGALESLERSWSLQSSGTVTTLFFTFIDFDEIVQVLPKVKM
KFPNASHLKFKETNLAMFQQFNALAQVRRLDQLTVDPQGNPVVNFTLWKYYVLFRLSHFN
LQKINGTEITSNDLVMAEKLFGILSYVASSDLPQFRLLSLLGESRKKNFNPFLEGKAKKS
GVTTEESNDSRRVGGERANRAILNYTIKDLQTERLEEIKEKNKFCHAYVLDLVKEASDIS
LKNETLQKLWPQMFIELVRDAVIEVHNKNSYMKLCLQRIIDQK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaacaagtatcggggcagactcacacccaacacggttaacagttgtgggtct
cagctggtctttcatcctcctgtgcttgagaaaaataaacagtatgaattcaagctaagt
aaagagcagccaactttatactacagaatctttctgcatgatctagaaaagaacagtgca
gtcagacaaggagatgcaaggttatcaagtcctttggttcgtactagacagaccccatca
gcagcaactgtggtagaaatgtttgctacggaattgaaacatggattagattctttgcct
ttgggagcatctggagaaatcaatcctattacttcagtaaagtctaggagcagatcggct
tctcatagatctgttctaaatgtttcaaagaatcaaggggatatttgctttggaaaaggg
gatcacaccagttgttatataagaggtaaaaagggtggatttccagttgtgcagcgctct
gctgaagagaaaatagcaaatccagatctactgaacttggaaagacaaaacttggcagct
tgtccagttattgaaggggaagagcaacttcgcctattaaacttgcagcataacttcata
actcagatgcagaatcttggaaatctgcggcgtctcatattcttggatttgtttaataat
cagattgaagaaataggtggcatttcatctttgttttcccttcgtgttcttatgttgggc
agtaacagaataaagaaaatctcaaatctagagagcttggagaaccttgacattttggat
cttcatggcaatcagatcactaaaatagaaaatgtatctcatctttctgagctccgagtg
ctaaaccttgctagaaacagtataaatcaagtagagaaccttagtggactgaagtcactg
gttgaacttaaccttcggaataaccagatcaactatgtgagagatgtggatactttgcca
aaccttcaacgcctgcatctcagctttaacagtatatcctgttttgaagatattctatgc
cttgcagactcctcatccattgcagatgtcacccttgatggcaatcctatagctcaggag
ccatggtacaaacaaaccattctcgggcatatgctgcagctccgacagctggatatgaag
agaatcacggaagaagaaaggcgtaccgcatcacttttggcaagaagagaggaagagaag
aagcgtgaaagccataaacaagccttactgaaggaaaagaaacgactagctatttacaat
gctgctcgacagtgggagaaacaacagaacagagtagtccatattcctgggtcaaaacat
gatcagaaagactacgatagcacgtctcacaaaccatgcccgatcgatggtaatgcacat
gcagtttctgaagaaaacaggtctcttgacacagtgctcaacagcgctctgcaaggtcta
tctgttatagactctcactttgtggaattagagggagacactctgtacttgtatgggtca
ggcgctttggaatctttggagcggagctggagtcttcagtcatcgggaactgttaccacg
cttttctttacttttatagattttgatgaaattgtccaagtgttacccaaagtaaagatg
aaattccctaatgcttcacatcttaaatttaaggaaacaaaccttgccatgttccagcag
ttcaatgcattagcccaagttcgtcgccttgaccaactgacagtggatcctcagggaaat
ccggttgttaattttactctctggaagtattatgtgctgttccggttgagccacttcaat
ctacagaaaataaatggaacagagatcacatcaaatgatttagttatggctgaaaagctg
tttggaattctgtcatatgtagcatcctctgatttaccacagtttcgactcctttctcta
cttggggaatccaggaagaagaatttcaatccatttttagaaggtaaagcaaaaaagtct
ggggtaacaaccgaagaaagcaatgatagcagacgggttggaggagaacgtgcaaaccgg
gctatactgaactacaccataaaagacttacagacagaaagattggaggaaataaaggag
aagaataagttttgccatgcatacgttctggatctggtgaaagaagcatctgacatcagt
ttaaaaaatgaaactctgcagaaactgtggcctcaaatgttcatcgagctagtcagggac
gcagtaattgaagtgcacaataaaaattcatacatgaaactctgcctacagaggatcatc
gatcaaaaatag
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