Geotrypetes seraphini (Gaboon caecilian): 117348100
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Entry
117348100 CDS
T09159
Symbol
DMXL2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117348100 (DMXL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117348100 (DMXL2)
Membrane trafficking [BR:
gsh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117348100 (DMXL2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
117348100 (DMXL2)
RAVE complex
117348100 (DMXL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_LRRK2
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_DCAF12
eIF2A
Beta-prop_Vps41
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_1st
VPS11_N
Motif
Other DBs
NCBI-GeneID:
117348100
NCBI-ProteinID:
XP_033775680
UniProt:
A0A6P8P3X8
LinkDB
All DBs
Position
14:20175447..20425891
Genome browser
AA seq
3108 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVNDIPFTAYGSGCDIVVLASDFECVQIIPGAKHGNIQV
SCVECSQQQGRIAASYGNTVCIFEPLGINSHKRNCQLNYQWLRTGQFFLSSVTYNLAWNP
QGNRLLTATDYVKLWAPPSGDILEEDEEEDVDGHPTQANVQPLLNDWNCIWQCKTAVSVH
LMEWSSDGEYFATAGKDDCLLKVWYPLAGWKSAIVSHEGQEKKESSSPVHFSFVYLAHPR
AVTGFSWRNTSKYMPRGSVCNVLLTSCLDGICRLWAETLLPEDSLLGRKICESSSPNISS
SLPQTGQQKDRIQHALESLHHLKHLRKGRRRSSVLAAHAELLPSQLSSHEVHRHISHHAN
SLCHFHIAASINPNTDIPPVLAGAAFNLDEGCGGFLVHWLNNKELHFTSSVERFIQYLRM
VAEDQLEPGDEEEDEEGLHMKLDHEEVFEEREGGTDSPDHEEAERDGSSKASTPDGTDVP
LPSVLIDRKIEKLLTEWNRNPDMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQVSFSSR
IPVAFPSGDASSLSKHILMYACTTSVKDPNVTVLEQEKPSLHLSASVPSIQVQIPDRDLP
KANLMTSTVMMVSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLNDLACHSV
LPLLLTSSHHNALLTPELDFPWDSDKYDRLTDSVNHVKGLTRQHLKNAATRTFYDPNAIY
SELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASACF
VASDGKNLRLYQAVVDARKLLDELSDPESSRLIGEVFNIVSQQSTARPGCIIELDVITSQ
CGSNTQLLHVFQEDFILGYKPNKEESKVKETEIFFQPSQGYRPPPFSEKFFLVVIEKDLK
NRSFMHMWHLHLKSVQACVAKTADVPISANQLSVPGQSNAESSPDTSPGTSPMTRSASIA
NLQTASKLILSSKIVYNQPLDLPYSVEVIRATPSAGHLSSSSIYPVCLAPYLVVTTCSDN
KVRFWRCSVKTDPHYESTEEKRTYHWREWSLMNDAGDDSKSTVMVAGRPVAVSCSYTGRL
AVAYKQLMDYNGFVSKEFSMHVSLFECESTGGSEWALEQTIHLDDLFKVANVLDSRVSVD
SNLFVYNKSDIFLNKDKHLMPNIKHLVHLDWVSKEDGSHILTVGVGSNIFMYGRLSGIVT
DPANSKDGMAVITLPLGGSIKQGVKSKWVLLRSIDLVSSVDGTPSLPVSLSWVRDGILVV
GMDCEMHVYAQWKYAAKVNIGECESCSSQDKTGFLQSESTQLPVKKTSVINGSAMVDDVF
SAPAVIQDGGLFEAAHALSPTLPQYHPTQLLELMDLGRVRRAKAILSHLVKCIAGEVAVV
KDTDTGDGSTPKRHLSRTISVSGSTAKDTIIAGKDGIREYTEIDSIPPLPLYALLSADSD
TTYKVSEEMTKRSQVPDGYLGAKTEDQYEDLFHVQNITDDFIGFEIEKRESKSKVINLSQ
YGPTYFGREHASVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELGESRDKNYSGGD
TLDECGLRYLLAMRLHTCLLTSLPPLYRLQLLHQGLSTCHFAWAFHSEAEEELINMIPAI
QRGDPQWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDPLDAALFYLAMKKKAVLW
GLFRSQHDEKMTQFFSHNFMEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEV
CLEKMEDFQLAMIIARLYESEFETSSTYQSILYEKVLGCQKDGTGFSCTKLHSDPFLRSI
AYWIMKDYTKALDTLLEQTPKEEDENPVIIKSCNPVVFSFYNYLRTHPLLIRRNFTIPED
PLATLGMKTEKNFVDEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPMLSKKGDISVN
EEECSLVLEGHNVLPTSNASKGDISNHDLDWSKPGSKSTGLEMASFQSSSDFDWSQPVIK
IGDDPLNLDWGEDNGALEDEDDKDGLIMKASELEQKGKCADVKESQGSETSNHVEVDVIA
EQLKFRACLKILMTELRTLATGYEIDGGKLRFQLYNWLEKEIAAMHDICNHETESKEYYP
ETHSKVAGDIAVPEIVLDKQDVGSYERHQIERRRLQAKREHAEKRKWWLQKNQALLRVFL
SYCSLHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASVAVTKTVI
ANPVLYLNNHIHDILYTIVQMKTPPHPDNKDVKIYTLHSLAASLSASIYQALCDSHSYSS
QTETNQFTGMAYQGLLLSERRRLRTESIEEHATPNSNPASWPGVSSLINLLTSAQDEDQP
KLNILLCEAVVAVYVSLMIHALATHSSSELFRLAAHPLNSRMWAAVFGGGVKLVVKPKRQ
LEAIPDKTKCLNEEKPERVPLVATQRSSSPPLTLSGSSESADGRDVEQLPQECAPPVPSE
EMDKHRRRFNMRMLVPGRPVKDNVAPPPVPAERPSYKEKFIPPELSMWDYFVAKPFLPLS
DSGVIYDSDESIPSDEEEDDAFLSDTQLQEHTNPNSYSWTLIRLVVIKLTLHNVKSFFPV
AGLEFSDLPVTSPLGIAVVKNLENWEQMLQERMDQFEGPPPNYIHVYPSELAVGAGPAIL
RHKAMLEPENTPFKSRDYSALPVRRLWHFLVKQELLQETFIRYIFTKKRKQSESVEDRVE
QVKQNCIAEDHKSKVEADLGYPGGKAKIIHKESDMIMAFAINKANCNEIVLASTHDVQEL
DITCLLAGQPYIWIGEEYDRESKSSDDDYRGSTLTLHQPSAPSFTISQLQPSSSTPWLGS
GLTSTGAGVLIKRNLNNVKRMASHPVHQYYVTGAQDGSVRMFEWNRPQQLICLRQAGNAR
VTRLYFNSQGNKCGVADGEGFLSIWQVNQTASNPKPYLSWQCHTKTTGDFAFITSSSLVA
TSGQSSDNRNVCLWDTLASPNNCLVHAFTCHDHGATVLQYAPKQQLLITGGRKGYICVFD
IRQRQILHTFQAHDSSVKALALDPAEDYFVTGSAEGNMKVWRLNRHGLIHSFKNEHAKQS
IFRNLGAGVIQIDIENENRIFSCGADGTLKMRILPSAFTISADLFNIL
NT seq
9327 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtactcaccggcgctgtcaatcccggagacaattgttattcggtt
ggcagcgttaatgacatccccttcacggcatatggatctggatgtgacattgttgttcta
gcaagtgactttgaatgtgtgcagatcattcctggtgctaaacatggaaacatccaggtc
agctgtgtggaatgctctcagcaacaaggccggattgcagcatcatatggaaatactgtt
tgtatttttgaaccacttggcattaactcacataagagaaactgtcaactaaattatcag
tggctcaggacaggccagttttttctcagttctgtcacttacaacttagcttggaatcct
caaggtaacaggcttttgacggctactgattatgtaaagctgtgggcccctccttcaggt
gatattctagaagaggatgaagaagaggatgttgatggtcatcccacacaggctaatgtt
cagcctcttctgaatgactggaactgtatttggcagtgcaagactgcagtgtccgtgcac
ttaatggaatggtcctctgatggtgaatactttgcaacagcaggaaaggatgattgtctg
ttaaaggtttggtatcctcttgctggctggaagtctgctattgtatcccatgagggccaa
gagaagaaagagagctcaagtcctgttcatttttcttttgtatatctggcacatcctcgg
gcagtaactggcttttcatggcggaacaccagcaagtatatgcccagaggatctgtgtgt
aatgttctacttacatcttgcttggatggcatctgtcgcctgtgggctgagaccttgttg
ccagaagatagtcttcttggcaggaagatctgtgagagcagcagtccaaatattagcagc
agtcttcctcaaactggacagcaaaaagacagaatacagcatgcactggagtcacttcat
catttaaagcatctgagaaaaggacgacggagatcttctgttcttgcagcacatgctgag
ctgttgccgagtcagctgagctcccatgaggtccatcgtcacatctctcaccatgccaac
tccttgtgtcactttcatatagctgcaagcatcaaccccaatacagatattccaccagtc
ttggctggagctgcttttaatttagatgaaggatgcgggggctttttggttcattggttg
aacaataaagaattgcactttacctcatctgttgagagatttattcagtatttgcgaatg
gtcgctgaagaccaacttgagcctggtgatgaggaagaggatgaagagggcttgcatatg
aaactagatcatgaagaagtatttgaggagagagaaggtggaacagactcgccagaccac
gaagaggcagaaagagatggaagcagcaaagcttcgacacctgatggtaccgatgtgcca
cttccttctgttttgatagaccgaaaaattgaaaaactgcttactgaatggaacagaaat
ccagacatgctttttacgattcaccctgtcgatggcacatttctagtgtggcatgtgaaa
tacctggatgaatacaatccaggaatctttcgacaagttcaggtctccttttcctctcga
attccagttgcttttccctctggcgacgcaagttccctcagtaaacacatcctgatgtac
gcttgtactacctctgtgaaagaccccaatgttactgtgctggagcaggagaagccatcc
ttgcacctttcagccagtgtcccaagcatacaagtgcagatccccgatagggaccttcca
aaggcaaaccttatgacttctacggtaatgatggtgtctaaacatatcgatggatctctg
aatcagtgggcagttacttttgcagacaagtctgctttcaccacggtgctcactgtgtct
cacaaatttaggtactgtgggcacagattccatctcaatgatttggcttgtcattctgtt
ttgccattactgttaacatcttctcatcacaatgccctgttgaccccagaattggatttt
ccctgggattccgacaaatatgatagattgacagactctgtcaatcatgtgaaaggccta
accaggcaacatctgaaaaatgcagcgactcggacattttatgatccaaatgccatctac
agtgagcttattctctggcgtgtagacccaattggacccttgtcatacacaggaggagtg
tctgaattagctcgaattaactcacttcatacctcagccttttctaatgtggcctggctt
cccactctcattcccagctactgtctaggtacatactgcaattctgctagtgcttgtttt
gttgcttccgatggcaagaacctgagattatatcaagcggtggtggatgcaaggaaactt
ctcgatgagttatcggatcctgaatcatcaagacttattggtgaagtgtttaacattgtg
agtcagcagtcaacggctcggccagggtgtatcattgaacttgatgtaataaccagtcaa
tgcggctcaaacacacaattacttcatgtgtttcaagaagatttcattctgggttataaa
ccaaataaagaagaatcaaaagtgaaggaaacggaaattttcttccagccatcacaaggt
tatcgcccaccacctttttcagaaaagttttttttggtggtaatcgaaaaagacctgaaa
aaccgttcctttatgcacatgtggcaccttcatcttaaatccgtgcaagcttgcgtagcc
aaaactgcagatgttcccatatcagcgaatcagctgtctgtacctgggcaaagtaatgca
gagtcttccccagacacctcccctggcactagtcccatgacccgctctgcctccattgct
aatcttcagacagccagcaagctcattttgagctccaagattgtgtataatcagcccctg
gatcttccgtattcagtagaagttataagagcaactccttcagcagggcatctgagctct
tcatcaatttacccagtatgccttgcaccttacctagtagtaaccacctgttcagacaat
aaagtgaggttttggagatgcagtgtaaagactgatccacattatgaaagcactgaagag
aaacgtacctatcactggagagaatggtcattgatgaacgatgcaggagatgacagcaaa
agtactgtgatggtagctggaaggcctgttgcagttagctgttcttacacaggccgtcta
gctgtggcgtataagcagctcatggattacaatggctttgtttccaaagagttttctatg
catgtttctttatttgagtgtgaatctactggggggtcagaatgggccttagaacaaaca
attcatcttgatgacttattcaaagttgcaaatgttcttgactcacgggtcagtgttgac
agtaatttatttgtatacaataaatcggatatatttttgaataaagacaagcatctaatg
cccaatattaagcatttggtacacttggattgggtatcaaaggaagatggttcacatata
cttacagttggagtaggatcaaatatattcatgtatgggcgactgtcagggattgtgaca
gatccagcaaacagcaaggatggaatggctgttattacattaccactaggtggtagcata
aagcaaggtgtcaagtcaaaatgggttcttttgagatcaattgacttagtgtcatctgtg
gatggcacaccttcattgcccgtatctttgtcttgggtaagagatggcatattagtggtg
ggaatggactgtgaaatgcatgtttatgcacagtggaaatatgctgcaaaagttaatatt
ggtgaatgtgagagctgttcttctcaggacaaaacaggatttcttcaatctgaatctact
caactgcctgtgaagaaaaccagtgtgattaatggctcggcgatggtagacgatgtgttt
agtgcaccagctgtgatccaggatggcgggctttttgaggctgcccatgctctttctccc
actcttccacagtaccacccaactcaactgttggaactcatggacctggggagagttcgc
agggcaaaagcaatcctttctcatttggtgaaatgtattgcaggagaagttgcagtagtc
aaggatacagacactggagatggcagtactcctaaacgtcatctttcacgaaccattagt
gtaagtggtagtacagcgaaggacacaatcattgctggaaaagatggtatccgggagtat
accgagatagattccattcctccactgccattatatgccctgctttctgcagattcagat
acaacatacaaagtttctgaagaaatgactaaaagatcccaagtccctgatgggtacttg
ggagctaaaacagaggatcagtatgaagacctttttcacgttcagaacataacagatgac
tttattggttttgaaatagaaaagagagaaagtaaatctaaagtcattaatctctcccag
tatggccctacttattttggacgagaacatgccagtgtgctgtcaagccatctaatgcat
tccagcttgccaggtctcactcggttggaacagatgtttctagtggctttggctgatact
gtagctaccacaagcacagagcttggtgagagtagagacaagaattactcaggtggagac
acactggatgaatgtggtttgcggtacttattggcaatgcgcttacatacctgccttctg
acatcattgcctccactatatcggcttcagctgctccaccaaggactgtctacctgccat
tttgcctgggcttttcactcggaggcagaggaggagttgatcaacatgatcccagctatt
cagagaggcgatcctcagtggtcagagctgagagcgatggggataggttggtgggtcaga
aatattaacacccttcgaaggtgcatcgagaaggttgcaaaagcttcctttcagaggaac
aatgatcctttggatgcggctcttttttaccttgccatgaagaaaaaggctgtgctctgg
ggtctatttcgatctcagcacgatgaaaagatgactcagtttttcagccacaattttatg
gaagataggtggcgcaaagcagccttgaaaaatgccttttctctgctaggaaaacagcga
tttgaacaatcggcggccttctttttattggctggctccttgaaagatgcaatagaggta
tgtcttgaaaaaatggaagactttcaactggccatgataatagctcgtttatatgagtca
gaatttgagacttcctctacctatcaatccattctttatgaaaaggttctgggttgccag
aaggatggtacagggttcagctgtactaaattgcattcagatcccttcttgcgcagcatt
gcttactggatcatgaaggattacaccaaggcattggatactttattggaacaaacacct
aaggaggaggatgaaaatccagttatcatcaaatcatgcaatcctgtggtattcagtttt
tacaactaccttcgcactcaccctcttcttatacgaagaaactttaccatacctgaagac
cccttggcaacccttggtatgaaaactgagaaaaactttgttgacgaaatcaatcttata
gaacgaaagttattttttaccacagcaaatgctcattttaaagttggatgccctgtatta
gctctggaagtattatccaaaatcccaatgcttagtaaaaagggtgacatttctgtaaat
gaagaagaatgcagcttagttcttgaaggacacaatgtactgccaacgtctaatgcatca
aagggtgatatatcaaatcatgacctagattggtcaaagccaggttcaaagtccactggc
ttagaaatggcaagttttcaaagctcctcagattttgactggagtcagccagttataaaa
attggtgatgatcctcttaatcttgattggggagaagataatggtgcactggaagacgag
gacgacaaagatggtttaatcatgaaagcttcagaattagagcaaaaaggaaaatgtgca
gatgttaaagagtcccagggatctgagacatctaatcatgtcgaggttgatgtgattgca
gagcagctcaaatttagagcatgtttgaaaatactgatgacagaactcaggactctagct
acaggttatgagatagatggtggaaagcttaggttccagctctacaactggttagaaaag
gaaattgctgcgatgcatgatatatgcaaccatgaaacggaaagcaaagagtattatcct
gaaactcattcaaaagtagccggtgacatagcagtgcctgaaattgttctcgataagcaa
gatgttggctcatacgaacgtcaccagatagaacgccgcagattacaagctaaacgagag
catgccgagaaacgaaaatggtggttgcagaagaaccaagctcttctaagagtgtttctt
agttactgtagtttgcatggagcccaaggaggtggtctggcctctgtgagaatggaactg
aaatttctgttgcaagagtcgcagcaggaaactactgtgaagcagcttcagtctcctctg
ccgttgcctacaacactccctttgctatcagcaagtgtcgctgtaaccaaaacagtcatt
gccaatcctgtactgtacttaaataaccacatccacgacatcctttataccattgtgcag
atgaaaactccgccacatcctgataataaagatgtgaagatatacacacttcactcatta
gctgcttcgctttctgcttctatttaccaagcgttatgtgacagccatagctacagtagt
caaacagaaacaaaccagtttactggaatggcttatcaagggcttctcctgagtgaacga
cgcaggctgagaacggaaagcattgaagaacatgcaacgccaaattccaaccctgcttct
tggcctggtgtcagctctcttatcaatcttttaacatctgcccaggatgaggaccaacca
aagttaaacatattgctgtgtgaagccgtggtggctgtttacgtgagcttgatgatacat
gctcttgccactcactctagcagtgagttgtttcgactagctgcccatcccctaaatagt
cgaatgtgggctgctgtttttggaggtggtgttaaactcgtcgtaaaacctaaacgacag
ttggaagctattccagataaaacaaagtgcttaaatgaggaaaaacctgaacgagttcca
ctagtagctactcagcgatcttcatcacccccattaactttgtcaggtagcagtgaatct
gctgatggtagagatgtggagcagttaccccaggagtgtgcccctccagtcccctcggaa
gaaatggataagcatcgtcgtcggtttaacatgaggatgctggtacctggaaggccagta
aaagacaatgttgcccctccaccagtgcctgcagaaagaccatcgtacaaagaaaaattc
attcctccggaacttagcatgtgggactactttgttgcaaagccgtttcttcctttatct
gacagcggcgttatctatgactctgatgaaagcatccccagcgatgaagaggaggatgat
gcctttctttcagacacacaacttcaggagcatacaaatccaaattcttacagctggacg
ctgattcgtttggtggtgataaaactgacccttcataatgtgaaaagcttctttcccgtt
gctgggctggaattctctgatctgccagtgacatctccgctgggcattgcggtggtaaaa
aatctagaaaactgggagcagatgctacaagagcgcatggaccagtttgaaggcccaccc
ccaaattacattcacgtttatcccagtgaacttgctgtcggtgcaggaccagccatactc
cgtcacaaggccatgctggaacctgaaaacacccctttcaaatcacgagattattcagcc
cttcctgttcgaaggctctggcatttccttgtgaaacaggagcttctacaggagacgttc
attagatacatattcacaaagaaaagaaaacagagtgagtctgtagaagatcgtgtggag
caggtcaaacaaaactgcatagcagaagatcacaaaagcaaggttgaagcagatcttggt
taccctggaggaaaagcaaagatcattcacaaagagtctgatatgatcatggcatttgcc
attaataaggcaaactgcaatgaaattgttctggcttctacccatgatgtacaagaactg
gatattacttgtctgttggctggtcagccctacatatggataggagaagaatacgacaga
gaatctaaaagttcagatgatgactatcgtggttcaacattaactcttcatcagcccagt
gcaccatccttcacgatcagtcaactgcagccatcctcatccacaccctggctgggcagt
gggttgactagtactggagcaggagtgcttataaaaagaaacctgaataacgtgaagaga
atggcatcacatccggttcatcagtactatgtcacaggagcccaagatggcagtgtccgg
atgtttgaatggaatcgtccacagcagttgatatgcctgcgccaagctggcaatgccagg
gtaaccagactctattttaactcccaaggcaataagtgtggtgttgctgatggggaggga
tttttaagtatttggcaagtgaatcaaactgcatccaatccaaagccttatctgagttgg
cagtgtcacactaaaaccactggtgattttgcctttattacctcttcaagcctagttgcc
acatctggacagtccagtgacaacagaaatgtctgcctgtgggacactctggcatcacct
aataactgtcttgtgcatgctttcacttgccatgaccatggggctacagtgctccagtat
gcacccaagcagcagctgttgatcactggcggcagaaaaggatatatctgtgtctttgat
atcaggcaacgacaaatccttcatactttccaagctcatgattcttcagttaaagctcta
gcactggatccagctgaagattactttgtcacaggatcagcagagggtaacatgaaggtg
tggaggttgaatagacatggtttaattcattcatttaagaatgaacatgccaagcagtcc
atattcagaaacctcggcgccggagtcatacagattgatatagaaaatgagaatcgcatt
ttctcctgcggggcagatggcacgctgaaaatgagaattttgcccagtgcttttactatc
tctgcagacctcttcaacatcttatag
DBGET
integrated database retrieval system
