Geotrypetes seraphini (Gaboon caecilian): 117348186
Help
Entry
117348186 CDS
T09159
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04350
TGF-beta signaling pathway
gsh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117348186 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117348186 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117348186 (NEO1)
Cell adhesion molecules [BR:
gsh04515
]
Immunoglobulin superfamily
DCC/UNC5 family
117348186 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Tissue_fac
SusE
C2-set_3
EphA2_TM
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
117348186
NCBI-ProteinID:
XP_033775821
UniProt:
A0A6P8PJN9
LinkDB
All DBs
Position
14:9764554..10124933
Genome browser
AA seq
1457 aa
AA seq
DB search
MADRGARRRLLSFGLAAFFILPIGPEPVAAARGSQSVTGSNVRTFTPFYFLMEPVDTLSV
RGSSVTLNCSAYSEHVPKIEWKKDGTFLNLASDDRRQLLPDGSLLINSVVHSKHNKPDEG
YYQCVATVESLGTIVSRTAKLTVAGLPRFANQPEPTSVYQGDNVVLNCEINADLVSFLRW
EQDREPLILDERMVKLPNGALVISNATESDGGVYRCVVENSGSPKYSDEAELKVLQEPGE
ERRLVFLHRPLPLSRVVGQSAILPCVASGFPYPLVHWTRREDEMILESSEKFRLLTGGSL
QINDIKDDDSGTYRCIAENGNETIEVQTDLTVQAPPIFLRGPANIYAHESMDIVFECEVT
GKPTPTVKWVKNGDMVIPSDYFKIVREHNLQVLGLVKSDEGFYQCIAENDVGNTQAGAQL
IILEHDVAIPTLASTSLTSATTDHLAPATIGPLPSAPRDVVASLVSTRFIKLTWRTPVDS
HGDNLTYSVFYSKDGDGRERVENTSYPGEMQVTIQNLMPETIYLFRVVARNKHGPGESSV
SLKVETQPEVQVPGPAPNLQAFANQPTSITVSWDTPLSGNGEIQNYKLYYMEKGMDNEQD
VDVGGHSYTINGLKKYTDYTCRVVAYNKHGPGVSTQDVVARTLSDVPSSAPQNLTLEVQN
SKSIMVHWQPPPPGTHNGQITGYKVRFRKVSRKSDVTENVGGIQLFQLIDGLERGTEYSF
RVAAITVNGTGPATDWVTGETFESDLDETRVPDIPSSLHVRPLVTSIVVSWTPPENQNIV
VRGYAIGYGLGSPHAQTIKVDYKQRYYTIENLNPSSHYVITLKAFNNVGEGIPVYESAVT
RSHTDTSEVDLFVVNAPYTPVPDPTPMMPPVGVQASILNHDTIRITWADNSLPKNQKITD
ARYYTVRWKTNIPANTKYKMANTTTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHG
TTFETVPTSPPKDVTVVSKEGKPRTIIINWQPPSEANGKITGYIIYYSTDVNAELHDWVI
EPVMGNRLTHQIQELTSDTPYFFKIQARNSKGMGPMSEAVQFRTPKAQVSGKGIRPPDMG
GASTGGSNTHHGSPTSTFDNSVLLVVIISIGVVTIVVVLIVAIMCTRRTTSHQKKKRAAC
KSVNGSHKYKGTSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQDVTPVDN
SMDGTIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMVPFDSQPPQPVISAHPIHSLDNPH
HHFHSGNLASPTRSYLHHLVNPQPLGFSISHSDRASSTESIRKTPSTENVSGSLSQTYSG
DHQEPEATTSSYLANPQEEESSQNLPTAHVRPSHPLKSFAVPAVPPANLTYDSALPSTPL
LSQQGPNQQVQSVKTASIGTLGRPRPPMPVVVPNAPEMQETTRMLEDCESNYEPDELTKE
MAHLEGLMKDLNAITTA
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggggggcccggcggcggctcctctccttcggtctggccgccttctttatc
ctcccaattggaccggagccggtcgcggctgccaggggctcccagtctgtcacagggtcc
aatgtgagaacatttactccattttatttcttgatggaacctgttgacactctctcagtt
cgcggatcctctgttactttgaactgttcagcatattcagagcatgttccaaaaattgag
tggaagaaagatggaacttttcttaatttagcatctgatgaccggcgccaactcttacca
gatggatctttattgataaacagtgtggtacattccaaacacaataaacccgatgaagga
tattatcagtgtgtagcaactgtggagagcctaggaactatagtgagcagaacagcaaag
ctcacagtagcaggtcttccaaggtttgcgaaccagcctgaacccacatctgtttatcaa
ggtgataacgtagttctgaactgtgaaatcaatgctgatctggtgtcatttctgagatgg
gagcaggatcgggaaccccttattctggatgaacggatggttaaactacctaacggagct
ctggttatcagtaatgctacagagagtgatggaggagtgtatcgatgtgtggtagaaaat
agtggctccccaaagtacagcgatgaagcagaacttaaagttcttcaagaacctggagag
gagaggcgtttggtctttctgcatcggcctttgccacttagcagagttgtcggacagagt
gcaattctcccatgtgttgcttcaggatttccatatccactcgttcactggactagaaga
gaggatgaaatgatcttagaaagttctgaaaagttcaggttgctgactggagggagtctg
cagattaatgatatcaaagatgatgattctggaacatatagatgtatcgcagagaatgga
aatgagaccattgaggttcaaactgatcttacagtacaagcacctcctatcttcctgaga
ggtcctgctaatatttatgctcatgagtccatggacattgtgtttgaatgtgaagtaact
ggaaaaccaactccaacagtgaagtgggttaaaaatggagacatggtgataccaagtgat
tacttcaagatagtaagagagcataacctacaggttctgggactggtgaaatccgatgag
ggattctatcaatgcattgctgaaaatgatgttgggaacactcaggctggagcacagctg
ataatcctagagcatgatgttgccatcccaacattagcttccacttcactgaccagtgcc
actactgaccatctagcaccagcaacaattggaccactgccttcagccccaagggacgtc
gtggcctctcttgtctcaactcgcttcatcaaactgacatggcggacaccggtggattct
catggagacaaccttacgtactctgtgttctacagcaaagatggtgatggaagagaacgt
gttgaaaacacaagttaccctggagaaatgcaagtgactatccaaaacctcatgcctgaa
actatctacctcttccgagttgtagctcgcaacaaacatggacctggggaaagttctgtg
tctctcaaagtagagactcaacctgaagttcaagtcccaggtccagctcccaatctccaa
gcttttgctaatcagcccacctcaattactgttagctgggacacaccactgtctggaaac
ggagagattcagaactacaaactgtactacatggagaaagggatggacaatgagcaggat
gttgatgttggaggtcactcttacaccattaatggtttgaagaagtatacggactacaca
tgtcgggttgtggcctataacaagcatggacctggagtttccacacaggatgttgttgct
agaacactctctgatgttcctagttctgcaccgcagaatctgactctggaagtccagaat
tcaaagagcatcatggtgcactggcagccacctcctccaggaactcataatggtcaaatc
acagggtacaaggttcgtttccgtaaagtatcccggaagagtgatgtcactgaaaacgtt
ggtggaatacagctttttcagctaattgatggtctggagcgaggtacagaatacagcttt
cgagtagctgccataactgtcaatggaactggaccagctacagactgggtgacgggagaa
acttttgagagtgatttagatgaaacacgtgttcccgatattccaagttccctccacgtg
cgtccccttgttaccagtattgtggtgagctggaccccacctgagaaccagaatattgtg
gtgagagggtatgctattggttatggccttggcagtcctcatgcacagaccataaaagtg
gactacaagcagcgctactacaccattgagaacttgaatccaagctcccattatgtgata
acgctgaaggccttcaacaatgttggtgaaggaatccctgtgtacgagagtgcagtgacc
cgatcccatacagacacttctgaagttgatttatttgttgttaatgctccatacactcca
gtgccagatcccactcctatgatgccaccagtgggagttcaggcttccatattaaaccat
gacactataaggatcacatgggcggacaactctctgccgaagaatcagaagattactgat
gctcgctactacacagtccgctggaaaaccaacatcccagcaaacactaagtataagatg
gcaaacacaacaactctgagttacttagtaactggattgaaaccaaataccctatatgaa
ttttctgtgatggtgaccaaaggtcgaaggtcaagtacatggagtatgactgctcatgga
accacctttgaaacagttcctacttctcctccaaaagatgtaactgtggtaagcaaagag
ggaaaaccacgtaccataattataaattggcaacctccatctgaagctaatggcaaaatt
acaggttacatcatttactacagcacggatgtgaatgctgaacttcatgactgggtcatt
gaacctgtgatgggaaaccgactaacacatcaaattcaagaactaaccagtgacacacca
tacttcttcaagattcaggctcgtaattccaagggcatggggcctatgtcagaagcagtg
cagttccggacccctaaagcccaagtgtcggggaaaggaattcgtcctccggatatgggt
ggagcatcaacaggtggcagtaatacccatcatgggagccccacgtctacctttgataac
agcgtactcctggtcgtcatcatatctatcggggtggtcaccatagtggtggtgctgatt
gtcgctatcatgtgcacccgccgcactacctctcatcagaaaaagaagcgagcagcctgt
aaatcagtaaatggatcccataaatacaaaggaacgtctaaggacgtcaaaccccctgat
ttgtggatccaccatgagaggttggagttgaaacccattgataaatcaccggaccccaac
cctatcatgacagatacaccaattccacgcaactctcaagatgttacaccagttgacaat
tccatggatgggacaatccatcaacggcgtaactcgtatagaggtcatgaatctgaggat
agcatgtccacattggcaggaagacggggaatgagaccaaaaatgatggtgccatttgat
tctcagccaccacaacctgtgattagtgcccatcccatccattccctcgataacccccac
catcatttccactccggcaacctcgcttctccaactcgcagctatctccaccatctggtc
aacccacagccactgggcttttccatctcccattcagacagggccagttccacagaatca
attcgaaaaacacctagcactgaaaatgtgtctgggtccttatctcagacctacagtgga
gatcatcaagagcccgaagctactactagctcttatctagctaatccccaggaggaagag
tcgagccaaaacctccctactgcccatgtccgaccctctcatcctctgaaaagttttgcg
gtgccagcagttccacctgcaaatttaacatacgactctgcacttccaagcacaccatta
ttgtcccagcaaggtccaaaccagcaagttcagtcagtgaagactgcttccattgggaca
cttgggagaccccggcctcccatgcctgtagttgttcctaatgctcctgaaatgcaagag
accaccaggatgcttgaagactgtgaaagtaattatgaaccggatgagctaaccaaagag
atggcccacctggaaggactcatgaaggacctcaatgccattaccacagcatga
DBGET
integrated database retrieval system
