Geotrypetes seraphini (Gaboon caecilian): 117348224
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Entry
117348224 CDS
T09159
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117348224 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117348224 (SIN3A)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
117348224 (SIN3A)
REST complex
117348224 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117348224 (SIN3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
117348224
NCBI-ProteinID:
XP_033775911
UniProt:
A0A6P8NXP2
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All DBs
Position
14:complement(50642517..50933064)
Genome browser
AA seq
1279 aa
AA seq
DB search
MLEYEFKMKRRLDEQESPVYPAQQRRIASSTDTFQHQHRVLAPAPPVYEAVSEGMQPATG
IQYSVTPSYQVSAIPQSSSSHGPSIATVHSGHHHTTPAQAHGSQVVQSHAHATPPAAPVQ
GQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFK
GHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPAQQHPSQPSTQ
STPTPAQPAPQPTPAKISKPIQSQAHTPNSQQTPQMPPYPPRSPPVQPHTPATISHGTTP
TLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGSYTPALT
EQEVYAQVARLFKNQEDLLSEFGQFLPDANSSMLLGKTTAEKVDSVRNDHGGTVKKPQLN
NKPQRPSQNGCQTRRYSGTGTTPPVKKKPKLLGLKDPSFEVGKYGAGTESLFFEKVRKAL
RSAEAYENFLRCLVVFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESTHIEPFP
KERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSED
STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETIQKKLSRLSAEEQAKFRLD
NTLGGTSEVIHRKALQRIYADKAADIIDGLKKNPSVAVPIVLKRLKMKEEEWREAQRGFN
KIWREQNEKYYLKSLDHQGINYKQNDTKLLRSKSLLNEIESIYDERQEQASEDNSSVPIG
PHMTLTYEDKQILDDAAGLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGILSDI
EEEEEEEMDIDEATGMAKKHNGVGSSVPKAKLLFSSTAAQKLRGLDEVYNLFYVNNNWYI
FLRLHQILCSRLLRIYSQAERQIEEENREREWEQEVLGIKRDKSDSPAIQLRLKEPMETE
VGEYYSAFLDMVRNLLDGNLDSSQYEDNLRDMFTIHAFIAFTMDKLIQSIVRQLQHIVSD
EICVQVTDLYLSESNIGVTGGLLATQASRALIEAAYQRKAEQIMSDENCFKLMFIQSRGP
VQLTIELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIR
KCQRGREQQEKEGKEGNIKKSMENLESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLR
AQQSHERVSKRLHQRFQSWVDKWTKEYVTHDMAAETNKWLMGEGREGLVPCSTACESEIL
HFVNINKYRVKYGTIFKTP
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagtatgagttcaagatgaagcggcgactggatgagcaggagtcgcctgtgtat
ccggcacagcagcgccgtattgccagcagcactgatacctttcagcatcagcaccgtgtg
cttgcaccggcacctcctgtttatgaagctgtttcagagggcatgcaacctgccacagga
attcagtactcagtaactcctagctaccaggtgtctgctatacctcagagttcaagcagt
catgggccctctatagcaactgtccacagtggacaccatcatactacaccagcacaggca
catggtagccaagtagtgcagagccatgcccatgcaacacctccagcagcacctgtccag
gggcagcagcagttccagagactaaaggtggaggatgccttgtcctatcttgatcaggtg
aagctgcagtttggcagtcagcctcaagtctataatgatttcttggatattatgaaggag
tttaaatctcaaagcattgatacccctggggtaattagtcgtgtgtctcaactgttcaaa
ggtcatcctgatctgatcatgggcttcaataccttcttgcctcctggttataaaattgag
gtgcagacaaacgacatggtgaatgtaacaaccccaggacaggttcatcagatacccact
catggcattcagccacagcctcagcctgcccagcagcacccgtcacaaccctcaacacag
tctacaccaactccagctcagccagctcctcagcctacacctgccaaaatcagcaagcca
atacagtcacaggcacatacacccaatagccagcagacaccacagatgcctccctatcca
ccacgctccccacctgtgcagccacacacgcctgcaaccatctcccatggaaccactcca
actctacagaataatcagcctgttgagttcaatcatgcaatcaactatgtcaacaaaatc
aaaaatcgcttccaaggacagcctgatatctacaaggcctttctggagattctgcacaca
taccagaaggagcagcggaatgctaaggaagcaggtgggagttacacaccagctctgaca
gaacaggaagtatatgcccaggtggcacgtctctttaagaaccaggaagacctcctgtca
gagtttgggcagttcctgccagatgccaacagctcaatgctgttaggtaagacgacggca
gaaaaagtggactccgttagaaatgaccatggtggcacagtgaaaaaacctcagttgaat
aacaagccacagaggcctagtcagaatgggtgccaaacccgccggtactcaggcacagga
acaacacctccagtgaagaaaaaaccaaagctgctgggtttaaaggatccgtcttttgag
gtcggcaagtatggggctggtacagaatctttgttctttgagaaggtccgcaaagcactt
cgcagtgctgaagcatatgaaaacttcctacgttgtcttgttgtttttaatcaagaagta
atttcccgggctgaacttgtgcaactggtttcgccatttctggggaagttcccagaattg
ttcacgtggtttaaaaatttcctggggtataaggaatcaactcatatagagccattcccc
aaggagcgagctactgaaggtattgctatggagatagattatgcttcgtgtaagagactg
ggttccagttacagagcacttcccaagagctaccaacaacccaaatgtacagggaggaca
ccgctctgcaaggaggttttgaacgacacttgggtttccttcccttcatggtcagaggat
tctacttttgttagttctaagaagacccagtatgaagagcatatctacagatgtgaggat
gagaggtttgagttggatgttgtcttggagacaaatcttgctacgatcagagttctggag
acaattcagaagaaactctcccgcttatctgcagaggaacaagccaagttccgattggat
aatactctgggtggcacgtcggaggtaatccaccgtaaggccttgcaaaggatatatgct
gacaaagctgctgacatcattgatgggctgaagaaaaacccatctgttgctgttcccatc
gtgctaaaaaggttaaagatgaaggaagaagaatggcgagaagctcagagagggtttaat
aagatttggagggaacaaaatgaaaaatattatttgaaatctttggaccaccaaggcatc
aactataaacagaatgacaccaagctcttaaggtcaaagagtttactcaacgagattgaa
agtatctatgatgagcggcaggagcaggcttcagaggataattctagtgtgccaatagga
ccacatatgacactcacctatgaagacaaacagatcttggatgatgctgcaggacttatt
atccatcatgtgaaacggcagacaggaatccagaaggaggacaaatacaaaatcaaacag
atcatgtatcatttcatcccagatctgctttttgctcaacgaggcatactctcggatatt
gaagaggaagaagaagaagaaatggatattgatgaagctactggaatggcaaaaaagcac
aatggggttggcagtagtgtccccaaggccaaacttcttttcagtagcacagcagcccag
aaattgagaggactggatgaagtgtataatctcttttatgtcaacaacaactggtacatt
ttcttgcgattgcaccagattttgtgctcccggcttttgcgtatctacagccaagctgag
cggcaaatcgaagaggagaaccgggaacgagagtgggaacaggaagtgcttggaattaaa
cgtgataagagtgacagtcctgccatccagctacgactcaaggaacccatggaaacagaa
gtgggagaatattattcagctttcctggatatggtgcgtaatctgttggatggtaatcta
gactcatcacagtatgaggacaatctgcgagatatgttcactatccatgcattcatcgcc
ttcactatggataaactcatccaaagcattgtcagacagctccagcatatagtgagtgat
gagatctgtgtgcaagtgactgatctttacttatcagagagcaatattggggtaacagga
ggcctgcttgccacacaagcctcccgggctctcattgaggctgcttaccagcgcaaagct
gagcagatcatgtctgatgagaactgcttcaagttgatgttcatccagagccgaggtcca
gtacagttaaccattgagctgttggacacagaggaagagaactccgatgaccctgtagag
gcggagcgttggtctgactatgtggaacggtacgtgaattctgactcaacctccccagag
ctgcgggaacacctggcccagaagcctgtgtttttaccaaggaacttgaggaggatccgc
aagtgtcaacgaggtcgggagcagcaagagaaggaagggaaggaggggaacattaagaag
tccatggagaacttggagagcttggacaagttagaatgtaaattcaagctgaattcgtac
aaaatggtgtatgtgatcaaatctgaggattacatgtacaggaggactgctttactgcgt
gcccagcagtcacatgaaagagtgagtaagcggctacaccagaggttccagtcctgggta
gacaaatggaccaaggagtatgtgacccatgatatggctgctgagaccaacaagtggcta
atgggagaagggcgtgaaggcttagtgccttgcagcactgcttgtgagtcagagatcctg
cactttgtgaacatcaacaagtatcgcgtcaaatacggcacaatattcaagactccctag
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integrated database retrieval system
