Geotrypetes seraphini (Gaboon caecilian): 117348238
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Entry
117348238 CDS
T09159
Symbol
TP53BP1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117348238 (TP53BP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
DUF4537
BRCT
RTT107_BRCT_5
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
117348238
NCBI-ProteinID:
XP_033775964
UniProt:
A0A6P8NXT8
LinkDB
All DBs
Position
14:complement(27019290..27110542)
Genome browser
AA seq
2247 aa
AA seq
DB search
MDPSGSQLDPDFSQQDTPCLIVEDSQPESAITEDDTERAKFGLLARHISQLQAGVESPVL
KPLSNPQSSNALTGGREEDSRVFTEPLKENQTTDPMETSPPSDANGCLSQVIDRLPCLSG
KTSDFAKEEEEKENDATNTTHSHLVEDSGTSQLAFGALELSQSQNLEDHSSLNKDSVGEQ
ARSMCDNSNAFGARREDSKDLNTDRDEASSARESCTLHHPGDKAKGVEFTPALPRTPTEQ
DKARKEVSLQGLLPPDQVSPGRDPEESEIVSSQEDMFGQNNTKGSDDSVTVSKVESHSSL
TLTPADSLRVLHLSGQTSLIPESPPQSSSVVVACSPDVFQSTPIMVPCSPTEQEEGPEEG
SEPMDTSAPSEDADHIKEKQREEEPMETDNLPLNAGSQAFPQASTPVCQNAPAFIPASFH
VPSQPEFSHDMFVPTPSMEESSNKEEKAVDLECISTSSASSKAAKIQNETSSLHHRQTLV
AGDSCKHQLSVNEHNESLVETEERNAQKANDNEATQIEEMEQTRETLETEQNSTANQSLN
LRLTEDSESLSYEKPTTPKDAVSAYRVASHSVPDVCIDLTSDSEKQAVLTSSLHSVSSPS
ILDPDISKDVEQNPPVKNLLEEGSSVEEVPETPCEKEEGAEEGQADEKLMEEDANLHLSL
SQTESQGVFLSVSQAPEDMEVDSETSAKDASKNKLPEKNQGAEDAGSPSVILKTNGENIP
KETSLDDMPKLTSIHGQPILVESVENPLSTNAQNMTETDFRNETRAKTHLETSKGQRDGE
GKCHLMLVPTIQDLQLPHAKQMNDLQDSLEGKEKQAVDDRLVTSEESEQQNEAPEPLQEN
LLEHQQQEGPLPLERAPDVLEMCQENQQHSPFIENMDDVPMPCLENQKHLLPVENVVSVS
CQETQQYPGHLDKLDMEKKQDQSLVPEEKPLMLQENQKNNVPDLSMPQMKQQHLISTETL
MKESSDASKENQQHHLPTGEILDVLGEPKEEEKQQQGVCAEGTTDVSVISQENKQKKDVL
GTPLGNAEILDVMPVSPHENEQMPQTSAEVNNLLVTPQESKWVHQVSLGGANDVPVISQE
NQYQASLKGEDDMQAKAEEIEPLGMEAQSQDRATDQSSSRSLCESSSEMPFHFTLPKEGD
IIQPLAGVTPPLINQLKLAPRRHSTPIMTGDCPKSSLASSDVSAETTMAPSDVTVESAMA
TSDVSDESGKIDSGVAPEANGKLYLRMKLVTPVHEESDESSQFSLEKPEATEKKNETAAF
AETVASIPKTQSVFSRICEVRREEEARGYDLPTTPVRGDVLHFPGTQEDQEDLGEDHRAW
QRQQRLKQISRGQIMTTQPTPEENLEQVCPAEEEAMEVDDAQGQSEGNDRPEERPKSQEK
IGKVSTEQMDTLWNMQLERNNKEVQTVKSLISTLPGISAATQTEKGADIQVEVGTSMASQ
EYGKQDASVQTEGESGRMQSGQKHVNIQGDDTDSLHSQGEDEFELRQPPPERLLHRHVRT
VREVRTVVTRVITDVYYVDGAEVERKVVEETDEPVVECQEYENDVSPSQTAGSSLTSGDL
ADISSLSSKASSLQRTSSGASSGLSAVHSGSSSDRGRGNLHQKGKMTALEPGEFAIPSGR
GPAGKLSPRRGASQPGSPNRPGGQAGMPACEEDGDAALGIRPGSKGSLTPRGRGRRGRPP
YRGAGAREMALTAQAGFDDPSPAASTDEEPFTRITARPLDSGHQPDAGTPTLCRSNSPEI
PLQIATSTLDNSDTSHGSSFVGLRVVAKWSSNGYFYSGTITQDVGGGKYKLLFDDGYECD
VLGKDILLCDPIPLDTEVTALSEDEYFSAGVVKAHRKESEELFYCIEKEGQRKWYKRTAV
ILSLEQGNRLREQYGLGPYEPVTPLTKAADISLDNLVEGKRKRRGNLSPATTLTTSSSSS
VSTPTRKVTESPRGVTNLLSGKRKIIISEDERSPSKRGRKSTTIKSSGMKAEEFVSPCES
GDNAGDVTALEECHGPLPQSKTLFLGYAFLLTTATASDKLANRQKSHDGPAMSSEEEEEF
VESMPYNKGYTESQLKAGGGYILEDFNEAQCKAAYKCFLIADQHCRTRKYFLCLASGIPC
VSHVWVNDSCHANQLQNFRNYLLPAGYSFQEERILEWHDGQHPFQNLKFLVVSDQQQNFL
DLWSEVLMTGGAASVKQHNSSAPHKDVALGVFDVLVADQSCPASVLKCAQALSLPMVSQE
WVIQCLINGERVGYNQHPKYKHNYIAS
NT seq
6744 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagtggaagtcagctggatccggatttctctcagcaggacacaccttgtctg
attgttgaggactcccagcctgaaagtgctataactgaagatgacactgagcgagcaaag
tttggcttactagcacgtcacatttcacaactgcaggctggagtggagagccctgtgttg
aagcccttatctaaccctcagagcagcaatgcactgactggaggaagagaagaagacagt
agggtcttcactgagccactgaaggagaaccagacaacagatcccatggaaacatctcct
ccctctgatgccaacggatgtcttagccaggtgattgacaggttaccgtgcctcagcggg
aagaccagcgactttgccaaagaagaggaggagaaggaaaatgatgctacgaacactacg
cattcacaccttgttgaagattctggcacgtcgcaactggcttttggagccctagagctg
tcgcagagccagaatttagaggatcacagcagcttaaacaaagacagtgttggtgaacag
gcacggtctatgtgtgacaactccaatgcttttggagctagaagagaagattctaaagac
ctaaatactgatagagatgaagcctcttctgccagagagagctgtacattacaccatcca
ggagataaagccaagggggtggagttcacacctgccttgcctagaacccccactgagcag
gacaaggccagaaaagaagtgtctcttcaaggactgcttccaccagaccaggtgtcacct
gggcgggatccagaggagtctgaaattgtttcatcacaggaagatatgtttgggcagaac
aacacaaaaggttcagatgacagtgtaacagtatccaaggtggagagtcatagttctttg
accttgactcctgctgacagtctacgtgtcttgcatctctcggggcagacgtcccttatt
cctgagagtcccccacagagctcttcggttgtggttgcctgttctcctgatgttttccaa
tcaacccctatcatggttccctgctctcccacagagcaggaagaagggccagaagaaggg
agtgaaccaatggacacatctgcaccttcagaagatgctgatcatataaaggagaagcaa
agagaagaggaaccaatggaaacggacaatcttccacttaatgcaggatctcaagccttt
ccacaggcttcaactccagtgtgtcagaatgcaccagccttcatccccgcctcttttcat
gttccatcacaaccagagttctcccatgatatgtttgttccaactccaagcatggaggag
agttcaaacaaagaagaaaaggctgttgatctggagtgcatctctacttcatcagcaagc
tctaaggctgcaaagatccaaaatgagacctcatcattacatcacaggcagacgcttgtg
gcaggtgattcttgcaaacatcagctgtcagtaaatgagcacaatgaatccttagttgag
acagaggagcgaaatgcacaaaaagcaaatgacaatgaagccacccagatagaagagatg
gaacaaacacgtgagactttggagactgaacagaactctactgctaatcaaagtctaaat
cttaggttaacagaagatagtgagtctctctcgtatgaaaagcctactacaccaaaagat
gctgttagtgcctatagagtggcatctcattcagtgccagacgtctgtattgatcttaca
agtgattctgaaaagcaagccgttctaacttcatccttgcattcagtgtcctccccgagt
attttggatccagatatttccaaagatgttgagcaaaatcctcctgtgaaaaacttgcta
gaagaaggctcatcggtcgaagaagttcctgaaactccatgtgagaaagaggagggagca
gaagaagggcaggctgatgagaaactgatggaagaggatgctaatcttcatctcagtctg
tctcagactgaatctcagggtgtgtttctctcagttagtcaggcaccagaagacatggag
gtggacagtgaaacatctgctaaagatgcatcaaaaaataagctgccagaaaagaaccag
ggtgcagaagatgcaggatcacccagcgttatcttaaaaacaaatggagaaaatataccc
aaagagacatcactagatgatatgccaaaactcaccagtattcatggacagcctattctg
gtagagtctgttgaaaatccattgtctacgaatgcccagaacatgacggagactgatttt
aggaatgaaacccgtgcaaaaacgcatttagagacctcaaaaggacaaagggatggggag
ggcaaatgtcatttaatgctggtgccaaccattcaggacctgcagcttccacatgcaaag
caaatgaatgacctgcaggattctctagaaggaaaagaaaagcaggcagtggatgatagg
ttggtgacttcagaagaaagtgagcagcagaatgaggcgccagagccactgcaagaaaac
ctgctagaacaccagcagcaagagggtccattacctttagaaagagcacctgatgtcctg
gagatgtgtcaggagaaccaacagcattcaccgtttatagaaaatatggatgatgtgcca
atgccgtgtcttgagaaccaaaagcatctgctgcctgtggaaaacgttgtctcggtttcc
tgtcaggagacccaacagtatccagggcatttggacaaattggacatggagaagaagcaa
gatcagtctttggtgcctgaagaaaaacctttgatgctccaagagaatcagaagaacaac
gtacctgatttgtcaatgccacaaatgaaacagcagcatttaatatctactgagacattg
atgaaagagtcttcagacgcatccaaggaaaaccagcaacatcatttgccaacaggggaa
atattggatgttctaggtgaacccaaggaggaggagaagcagcagcaaggggtttgtgca
gagggtacaacagatgtgtcggtaatatcccaagagaacaaacagaaaaaggatgtactc
gggaccccactgggcaatgcagagatactggatgttatgccagtatcaccgcatgaaaat
gagcagatgcctcagacatctgcagaagtaaacaatttgcttgtgacaccacaggaaagc
aaatgggtgcatcaggtgtctttagggggagcaaacgatgtgccagtgatatcgcaggaa
aaccagtaccaggcatctctgaagggcgaggatgatatgcaagcaaaggctgaagagatt
gagccgcttggaatggaagcacagtcgcaggacagggcaaccgaccagtcatcgtcgagg
agcttgtgtgagagttccagcgaaatgccatttcattttactttaccgaaagaaggagac
atcattcagccactggctggtgtcaccccaccacttattaatcaactgaagctggcgccc
agaagacacagtacacctatcatgactggagactgtccaaaaagctctttggcctctagt
gatgtgtctgctgagactacaatggcgcccagtgatgtcaccgtggagagtgctatggct
acaagtgatgtatctgacgagagcgggaaaatagattctggagtggctccagaggctaat
gggaaactgtatctaagaatgaaacttgtcacacctgttcacgaagaaagtgatgaatct
tcacagttcagtttggaaaagcctgaagctactgaaaagaaaaatgaaacggctgctttt
gctgaaactgttgccagtatcccaaaaactcagtctgtattcagtcgcatctgtgaagtt
cgacgagaagaagaagccagaggttatgaccttcctactactccagtccggggcgacgtg
ctccatttcccaggaacgcaagaggaccaggaagatttgggtgaagatcatagagcttgg
caacgccagcagcgcttgaagcagatttctcgtggacagattatgactactcagccaacg
ccagaggagaacctggagcaggtttgccctgcagaagaagaagccatggaggttgatgat
gcacaggggcaatcggagggaaatgacagaccagaagaaaggccgaaaagtcaagaaaag
ataggcaaggtgtccacagagcagatggacacattgtggaacatgcagctggaaagaaac
aacaaagaggtccaaactgtgaagagcttgatctccacacttccaggaatttctgcggca
acccagacagagaaaggagcagacatccaggtggaggtgggcaccagcatggccagccaa
gaatatgggaaacaggatgccagcgtccaaactgagggggagtctgggagaatgcagagt
gggcagaaacatgttaatatccagggagatgatacggactctctacacagccagggggaa
gatgagtttgagttgcggcaaccccctccagaacgtctcctgcaccgccacgtgcggaca
gttcgtgaagtgcgcaccgtggtcactcgagttatcacagatgtctactatgtggatgga
gctgaggttgagcgcaaggtggtagaggaaactgatgaaccagttgttgaatgtcaagag
tatgagaatgatgtttcgccttcccagaccgcagggtcctctttgacctctggagatctt
gcggacatcagttccctttcttcaaaagcatcaagcctgcagcgtacatccagtggggca
agcagcggtttgtctgccgttcacagtggcagcagctcagatcgaggccgggggaacctc
catcagaaagggaaaatgactgcattggaacctggagagtttgcaatacccagtggcagg
ggccctgcaggaaaactgagtcctaggcgaggggccagccaaccaggatctccaaaccgg
cctggaggccaagcgggcatgccagcatgcgaggaagatggtgatgcagcacttggtatc
agaccggggagcaaaggatctttgacacctcgtgggcgagggaggaggggacgccctccc
tatcgaggagctggagcaagggagatggcactgacggcacaggcaggctttgatgaccct
tcgcctgcggcctcgacagatgaggagccatttacccgcattacggctcgtccactggac
tctggccaccagccagacgctggaacacccactttgtgtagaagcaattctccagaaatc
cctttgcaaatcgccaccagcaccttggacaactcggacacatcacacggcagcagtttt
gttgggctcagggttgtagccaagtggtcctcaaatggatatttttattcaggaacaatt
acccaggacgttggaggagggaaatacaagttactgtttgatgacggctatgaatgtgac
gtcttgggcaaagacattttactctgtgaccccattccgctggatactgaggtgacagca
ctttcagaggatgagtatttcagtgcaggtgttgtgaaggcacacaggaaggaatccgag
gagttgttttactgtattgagaaggaaggccagaggaaatggtacaagcggacagcagtg
atcctttctctggaacaagggaacagactccgagaacagtatggccttggaccgtatgaa
cctgttacaccccttactaaagcagctgacatcagccttgataacctagtggaaggaaaa
cggaaacggcgtggtaatctcagccctgctacaactctgactacatccagctcctccagt
gtgagcaccccaactcgcaaagtgacagaaagtccccgaggtgttaccaacttgctgtct
gggaagaggaaaatcatcatttctgaagatgaacgatctccttccaaacgtgggcgcaag
tctacaacaataaaatccagtggtatgaaggctgaagagtttgtaagcccctgtgaaagt
ggagataatgctggagatgtcaccgctctagaagagtgtcatggacccctgccacaaagc
aagactctctttcttgggtatgcgtttcttctcacaacagcaacagctagtgacaaacta
gctaatcgacagaaatcacacgacggtcctgctatgagcagtgaggaggaggaagagttt
gtggaaagcatgccatataataaggggtacacagaatcccagcttaaggctggtggtggt
tacattctggaggattttaatgaagcccagtgtaaggcagcctataaatgtttcctgatt
gcagaccagcactgtcgaaccagaaagtatttcctgtgccttgccagtgggatcccctgc
gtttcccatgtctgggttaatgacagctgccatgctaaccagcttcaaaactttcgtaat
tatctcctcccagctggatacagtttccaagaggagaggatacttgagtggcatgatggg
cagcatccattccagaacctgaagtttcttgtggtttcagaccagcaacagaacttcttg
gacctgtggtctgaagtcctgatgactgggggagctgcatctgtaaagcagcataactca
tctgcacctcacaaagatgtcgctttgggtgtttttgatgtcctcgttgcggatcagtca
tgtccagcctctgtccttaagtgtgcacaagccttatcgctgcctatggtatcacaggag
tgggtcatccagtgtctaatcaatggtgagagagttggatacaaccaacatccaaaatat
aaacacaattacattgcgagctaa
DBGET
integrated database retrieval system
