Geotrypetes seraphini (Gaboon caecilian): 117348266
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Entry
117348266 CDS
T09159
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04260
Cardiac muscle contraction
gsh04261
Adrenergic signaling in cardiomyocytes
gsh04814
Motor proteins
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117348266 (TPM1)
04820 Cytoskeleton in muscle cells
117348266 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117348266 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
117348266 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117348266 (TPM1)
04147 Exosome [BR:
gsh04147
]
117348266 (TPM1)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
117348266 (TPM1)
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of microglial cells
117348266 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
CCDC39
DUF745
Rod_CreS
TMF_DNA_bd
Sec2p
DUF3450
CENP-F_leu_zip
FKBP15
ATG16
PUMA_CC
Lebercilin
MscS_porin
WS_DGAT_cat
HAUS1
DUF1664
DUF7518
CC_Bre1
SlyX
Laminin_I
EzrA
AAA_13
ERM_helical
ADIP
Fez1
TMP_N
Motif
Other DBs
NCBI-GeneID:
117348266
NCBI-ProteinID:
XP_033776052
UniProt:
A0A6P8NJB3
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All DBs
Position
14:2809921..2856939
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENAMDRAEQAEADKKAAEDRSKQLEDELVALQKKLKGTEDELDKF
SEALKDAQEKLELADKKAMDAEADVASLNRRIQLVEEELDRAQERLSTALQKLEEAEKAA
DESERGMKVIENRALKDEERMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERTVAKLEKSIDDLEDELYSQKLRYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgctatcaagaagaagatgcagatgctgaaactggacaaggaaaacgcgatggac
agagcggagcaagccgaagcggacaagaaggcggccgaagacagaagcaaacagctggag
gacgagttggtggctctgcaaaagaagcttaagggtactgaagatgagctggacaaattc
tccgaggcccttaaagatgcccaggagaagttggaactggctgacaaaaaggccatggac
gctgaagctgatgtagcttctctgaacagacgtatccagctggttgaggaagaactggat
cgtgctcaggagcgtttaagtacagctcttcagaaactggaggaagctgagaaggctgcg
gatgagagtgagagaggaatgaaggtcattgaaaacagagccttgaaggatgaagagcga
atggagattcaagagatccagcttaaagaggccaagcacattgctgaagaggctgaccgc
aagtatgaagaggttgcacgtaaactggtcatcattgaaggtgatctggagcgtgctgaa
gaacgtgctgagctctcagaaagcaaatgtgctgaacttgaagaagagttgaaaactgtg
accaacaacctgaagtccctggaggctcaggctgaaaagtactcccagaaagaagacaaa
tacgaagaagaaatcaagattcttactgacaagctgaaggaggcagagacacgtgctgag
tttgctgaaaggacagtagccaagctggagaagtccattgatgacctagaagatgagttg
tattctcagaaactgaggtataaagcaatcagcgaggagctggaccacgctctcaacgac
atgacatcaatataa
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