Geotrypetes seraphini (Gaboon caecilian): 117348316
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Entry
117348316 CDS
T09159
Symbol
MYO5A
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Va
KO
K10357
myosin V
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117348316 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117348316 (MYO5A)
04131 Membrane trafficking [BR:
gsh04131
]
117348316 (MYO5A)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117348316 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117348316 (MYO5A)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117348316 (MYO5A)
mRNA cycle factors
P-body specific factors
117348316 (MYO5A)
Membrane trafficking [BR:
gsh04131
]
Others
Actin-binding proteins
Myosins
117348316 (MYO5A)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117348316 (MYO5A)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117348316 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
HTH_17
nSTAND3
AAA_22
Myosin_N
AAA_16
DUF5382
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
117348316
NCBI-ProteinID:
XP_033776191
UniProt:
A0A6P8PKP4
LinkDB
All DBs
Position
14:16745043..16992588
Genome browser
AA seq
1825 aa
AA seq
DB search
MAASELYTKYARVWIPDPEDVWKSAEILKDFKPGDSALQLRPEEGSDFDYRLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIIHAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASAALPDFKSLRLGNADYFHYTSQGGSPVIDGID
DAKEMRNTRQACTLLGIGESYQMGIFRILASILHLGNVEFNSRDSDSCIVPPKHEPLSIF
CDLMGVEYEEMAHWLCHRKLVTAAETYIKPISKLQAINARDALSKHIYANLFGWIVHHVN
HALHSTAKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPXGSDNSWAQKLYNTHLNKSSLFGK
PRLSNKAFIIQHFADKVEYQCEGFLEKNKDTVFEEQIKVLKASKFKLLTELFEEEEHALS
PTSRTPTGRTLLSRASVKSIKTKPGQTSKDHKKTVGHQFRNSLQLLMETLNATTPHYVRC
IKPNDFKFPFTFDAKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
SDRKQTCKNVLEKLILNKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW
LMRKKYLRMKRAAITIQRYVRGYQARCLAQFLRRTRAAIIIQKFQRMYVVRQKYQRLRAF
TIAFQAQLRGYAARKRYQAMLREHKATILQKHVRGWLTRLSYKRTLRAIVYLQCCYRRMM
AKRELKKLKIEARSVERYKKLNIGMENKIMQLQRKIDEQNKDGKSLLERLTSLETTYNME
TEKLRSDVTRLRTCEEEARNATNRNLSLQEEVTKLRKELKDTQCEKLLIEKNAKGYRKET
DMLLSELKEQNTSLKGEKEELNRLIQEQAKSMTEAMEKRLMEETKELEHDLNDERLRYQN
LLNEFSRLEERYDDLKDELNVMVTIPKPGHRRTDSTHSSNESEYTFSSELIEAEEVPVRA
EEPAEKKTPLDMSLFLKLQKRVSELEQEKQSLQDELDRKEDQILRSKTKEDARPPLRGAE
FEYESLKRQELESENKKLKNELNELQKALTEKGAPEVTAPGAPAYRVLLDQLTSVSEELE
VRKEEVLILRSQLMSQKEAIPPKDTMTDSRIFLEDVQKMRDKGEIAQAYLGMKETTRLLE
AQLQAQKKSNENEVESLRGEIQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTN
ENLDLMEQLEKQDKTIRKLKKQLKVFARKIGELEVGQMETVSPGQIADEPIRPVNIPRKE
KDFQGMLEYKKDDELKLVKNLILDLKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVR
SLLTSTINGIKKVLKKKGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTTRQNEHCL
TNFDLAEYRQVLSDLAIQIYQQLVRVLEIILQPMIVSGMLEHETIQGVSGVKPTGLRKRT
SSIADEGTYTLDSIIRQLNTFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRKDM
CSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICSM
CNALTTAQIVKVLNLYTPVNEFEERVSVLFIRTIQIRLRDRKDSPQLLMDAKHIFPVTFP
FNPSSLALETIQIPSSLGLAFISRV
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatccgagctctataccaagtatgccagagtatggatcccggacccagaagat
gtttggaaatcagcagaaattctcaaggattttaaaccgggggattcggcccttcagctg
cgccccgaagaaggctcggattttgactatcgtctagatcccaagacaaaggaactgccc
cctctgcgtaatccggacattcttgtaggtgaaaatgacctcactgcgctcagttacctc
catgagcctgctgtcctgcacaatctcaaagtccgttttattgactcaaaacttatttat
acatattgtggcattgttcttgtggccattaatccttatgaacagctgcctatctacggg
gaagacatcatccatgcgtacagtgggcagaatatgggagatatggatccccatatcttc
gctgtggctgaggaagcatataagcagatggctagagatgagagaaaccagtcaatcatc
gtcagtggggagtcgggagcaggaaagaccgtgtctgcgaaatacgctatgagatacttt
gccacagtcagtggctcagccagtgaggctaacgttgaggagaaggtgttggcttcaaac
cccatcatggagtctatcggaaatgccaaaactacaaggaacgacaacagcagtcgcttt
gggaagtacattgaaattgggtttgataagcggtatcgaataattggtgccaatatgaga
acctacctcttagaaaaatcaagagtggtatttcaggcggatgaagagagaaactatcat
atcttttaccagctctgtgcctctgcggcgttaccagattttaagtcactacgattaggt
aacgctgattacttccactacacaagccaaggaggcagcccagttattgatgggatagat
gatgctaaagaaatgagaaacacgaggcaagcctgcacactgctggggattggagaatcg
tatcagatgggaatctttagaattctagcttccattcttcacctggggaatgtggaattt
aattctcgggattcggacagctgcatagtacctccaaagcatgaacctctatccatcttc
tgtgacctcatgggagtagaatatgaagagatggcacactggctctgtcacaggaagctc
gtcactgctgctgagacatacatcaaacctatctccaaactacaggctatcaatgccagg
gatgccctctccaagcacatctacgccaacctctttggctggattgtacatcatgttaac
cacgccctgcactctactgccaaacagcactcattcattggtgtgcttgatatttatggg
tttgagacatttgagataaatagctttgaacagttctgtataaactacgccaatgaaaaa
ctccagcagcagttcaatatgcatgtcttcaagctggaacaggaggagtatatgaaggag
caaattccatggaccttgattgacttctatgacaaccaaccctgcatcaatcttatagag
gccaagatgggtgttctggatcttctcgacgaagaatgtaagatgcctnaaggatcagat
aatagctgggcccagaaactgtataacacacacctgaacaaatcctcgctttttgggaaa
ccacgattgtcaaacaaagcttttatcattcagcactttgctgacaaggtggagtatcag
tgtgagggctttctggaaaagaacaaagatacagtgtttgaagagcaaatcaaagtgcta
aaagcgagcaagtttaagctgctgacagagttgtttgaagaagaggagcatgcgctgagc
cctacttcgagaacccccactggacgtaccttgttatctcgagcatctgtgaaatccatc
aaaaccaaacctggccaaacaagcaaagatcacaaaaagacggttggccaccagtttcgc
aactctcttcagctgttgatggagaccctcaatgcaacaactcctcactatgtgcgttgc
atcaagcccaatgatttcaagttccccttcacgtttgatgccaagagagcagtgcagcag
ctccgagcctgtggtgtcctggagaccatccgaatcagcgccgccggtttcccttccagg
tggacataccaagagttcttcagccgctaccgcgttctaatgaagcagaaggatgttctc
agtgaccgaaaacagacctgcaagaatgtgctagagaagcttattctgaacaaggataaa
taccagtttggcaaaaccaagattttcttccgtgcgggacaagtagcctacctggagaaa
ataagggcagacaagctgagggctgcctgtatccgaattcagaagaccatccgtggttgg
ctgatgaggaagaagtacctgcgtatgaagagagctgctattactattcagagatatgtg
cgaggataccaggctcgctgcttggctcagtttctgcgcaggaccagagctgccattatt
attcagaaattccagcgcatgtatgtggtacgccaaaaatatcagagattacgggccttt
accatcgcgttccaagcacagctgcggggctatgctgcccggaagaggtatcaagcgatg
cttcgagagcataaagccacgatccttcagaagcatgtgcgaggctggctgacccggttg
tcttataagaggaccttgagggccattgtctacctgcagtgctgctaccggcgcatgatg
gccaagagggaactgaagaaactgaagatcgaggcacgctcagtggagcgctacaagaaa
ctcaacattggcatggaaaacaagatcatgcagctccagcgcaaaatcgatgagcagaac
aaagacggcaagtcattgctggagaggctgacaagcctggagaccacatacaacatggag
actgagaagctgcgcagcgatgtgactcgcctgcgcacatgcgaggaggaggccaggaat
gccactaaccgcaacctcagcctacaggaggaagtcaccaagcttcgcaaagagctgaaa
gacacacagtgtgagaagctgctcattgagaagaacgcaaagggctacagaaaggagact
gacatgctgctctcggagcttaaggagcaaaacacatcattgaagggggagaaggaggag
ctgaaccggctaattcaggaacaggccaagtccatgacagaggccatggagaagaggttg
atggaagaaaccaaagagctggaacacgacctgaatgatgaaaggctgaggtatcaaaac
cttttgaacgagttcagtcgcctggaagaacgctacgatgacctcaaggatgaactcaac
gtgatggtgaccattcccaagccaggacacagaagaacggactccacgcacagcagtaat
gaatctgaatatacatttagttctgagcttatagaggcagaggaggtacctgtgagagca
gaggagccagcagagaagaagacccctctggacatgtccctgttcctgaagctgcagaaa
agggtttcagagttggaacaggaaaagcaatccctgcaggatgaactggacaggaaggaa
gaccaaatcctgcgaagcaaaaccaaggaggatgctaggcctccacttagaggagctgaa
tttgaatacgagtctcttaagcgccaggaacttgaatctgagaacaagaagctgaagaat
gagctaaatgagttgcagaaagccctcactgaaaaaggtgcaccagaagtaactgctccc
ggggcccctgcctatagagtcctcctggatcaactgacctcagtcagcgaggaactggaa
gtgcgtaaggaagaagtcctcatcctccgatctcaactgatgagccagaaggaggccatt
ccacctaaggatacaatgacagattctaggatcttcctggaagatgtgcagaagatgagg
gacaaaggggagatcgcacaggcgtacctagggatgaaggagaccaccaggctgttggaa
gctcagttgcaggcccagaagaagagcaatgagaatgaggtggaaagcctgcgtggtgaa
atccagagtttgaaggaggaaaacaatcgccagcaacagctgctggcacagaacctgcag
ctgccacctgaggcccgcattgaagctagtctgcagcatgagatcaccaggctgaccaat
gagaacctggatttgatggagcagctggagaaacaagataagactatccgcaagctgaag
aagcagttgaaagtctttgctaggaagattggagagctggaagttggccagatggaaacc
gtatccccaggacagattgctgatgaacccattcgtcctgttaacatcccgaggaaagaa
aaggacttccaaggaatgctggaatacaagaaggatgatgaactgaaactggtgaagaac
ctcatcttggatctgaaaccacgtggtgtggctgtcaatctcatcccaggactgcccgcc
tatattctgttcatgtgtgtccgccatgctgattatcttaatgatgaccagaaagtacgc
tcgcttctgacttcaactatcaatggaatcaagaaagtgttgaagaaaaagggtgatgac
tttgaaacagtctccttctggctgtccaacacctgccgattcctgcattgcttgaagcag
tacagtggagaagagggatttatgaagcacaacacgactcgtcaaaatgagcactgcctg
acaaattttgaccttgctgaatacagacaagtcctgagtgacctggccatacagatctac
cagcaacttgtccgagtgttggagatcatcctacagccaatgattgtttcaggaatgctg
gagcatgagactatccagggtgtctcaggggtaaagcccacaggcctgcggaagaggacc
tcaagcattgccgatgaagggacctacaccctggactccatcattagacaactcaacacc
ttccactcggtaatgtgccaacatggcatggacccagagctcatcaagcaggtggtgaag
cagatgttctacatcatcggggcagtcacgctgaacaacttgcttctacgcaaggatatg
tgctcttggagcaagggcatgcagatacggtacaacgtgagccagcttgaagaatggctg
cgtgacaagaatctgatgaacagtggtgccaaggagaccctggagccattaatacaggct
gcacagctgctacaagtgaaaaagaaaacagatgaagatgctgaggccatttgctccatg
tgcaatgctctcactactgcacagattgtaaaagttttgaatttgtatacaccagtcaat
gagtttgaagaaagagtctccgtattgtttattcggactatccagattcgtttgcgagac
aggaaagattcccctcagctgctaatggatgcaaaacacatcttccccgtgaccttccct
tttaacccttcctctcttgctctggaaaccattcagattccaagcagtcttggcttggcc
ttcatttctcgagtctga
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integrated database retrieval system
