Geotrypetes seraphini (Gaboon caecilian): 117348478
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Entry
117348478 CDS
T09159
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117348478 (SSRP1)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117348478 (SSRP1)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
117348478 (SSRP1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
117348478 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
SSRP1_C
bPH_2
Motif
Other DBs
NCBI-GeneID:
117348478
NCBI-ProteinID:
XP_033776568
UniProt:
A0A6P8PPF6
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Position
14:57995687..58032075
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AA seq
719 aa
AA seq
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MSDTLEFNEIYQEVKGSMNDGRLRLNHQGVIFKNSKTGKVDNIQGSELSEGIWRRVALGH
GIKLITKNGHVYKYDGFRESEFEKLSEFFKSHFRVDLVEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPAFELPLSNVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGLDPVEA
FAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
KLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHTGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEKKEGMKQSYDEYADSDEDTHDAYLERMKEEGKIRENANDSSDDDGDET
DESFNPGEEEDEIAEEFDSEVSPSSSSNEGDSDNQTEKKKPSKRAKIVKEKKPRKKTSEG
KKGKDPNAPKRPMSAYMLWLNASREKIKGDNPGISITDLSKKAGEIWKGMSKEKKEEWEK
KADEAKRDYERARKEYNESGGSESSKEKVKKMKIKGEKKSDKKPEKKSEKKSSSKTIAKS
PVKDTNEKDESFKSKEFVSSDESSSESEGKKSEGSEKEEEIASTPPSSMNSASDSGSEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacacgctggagttcaatgaaatataccaagaggtgaagggatccatgaatgat
ggccgccttcgccttaatcaccagggtgtaatcttcaagaacagtaagacaggaaaggtg
gacaatattcaaggctcagagctctctgagggcatttggcgcagagtggcattgggccat
ggcattaaactgataaccaaaaatggacatgtatataaatatgatggctttcgagaatcg
gagtttgagaagctctctgaattctttaaatctcattttcgggtggatctggtggagaag
gacctgtgtgtcaaaggctggaattggggaacagtgaagtttggagggcagcttctttcc
tttgatattggggatcagccagcgtttgaactgccactcagtaacgtttctcagtgcgcc
actggaaagaatgaggtgaccctagaattccatcagaatgatgacgcagaagtttcgctc
atggaggtgcgcttctatgttccacctactcaggaagatggtctggatcccgtggaggca
tttgcccagaatgttctatcaaaggcagatgtgattcaggccacaggtgacgctgtctgc
attttccgtgaactgcagtgtttgactcctcgaggccgttacgatatccgtatctaccct
acctttctgcacctgcatggcaaaacctttgactacaagattccttataccacagtactg
cggctcttccttcttccgcacaaggaccagaggcagatgttctttgtgataagtctggat
cctccaatcaaacaaggtcagacgcgataccacttcctgatcttgctcttctccaaggat
gaagacatctctctcaccttaaacatgaacgaggaggaagtggagaaacgttttgagggg
aagttaacgaagaatatgtctggttcactctatgaaatggtgagcagagtcatgaaggcc
ctggttaaccgaaaaattactgtgccaggaaacttccaaggacacacaggggctcagtgt
atcacatgctcatataaggccagctcgggacttctctatcctctggaacgaggatttata
tatgttcacaagccacctgttcacattcgatttgatgaaatctcatttgtcaactttgcc
agaggaaccacgaccacgcgatcgtttgactttgagattgaaaccaaacaaggctcccaa
tataccttcagcagcattgagagggaagaatatgggaaactctttgattttgtgaatgca
aagaaactcaacataaagaacagaggacttaaggagaagaaagagggcatgaagcagagc
tatgatgagtatgcagactctgatgaggacacgcatgatgcatatttggagcgtatgaaa
gaggaagggaagatccgtgagaatgccaatgacagcagtgatgatgacggtgatgaaaca
gatgagtcatttaatcctggtgaggaagaagatgagattgctgaggaatttgacagtgaa
gtgtctccaagctcatccagtaatgaaggagacagtgacaaccaaacggagaagaaaaaa
ccatcaaagagagccaaaatagtgaaagagaaaaaaccacgcaagaaaacatcagagggt
aagaaaggaaaggatccaaatgcccccaaacgtcccatgtctgcttacatgttgtggctt
aatgccagccgggagaagatcaaaggagataatcctggcatcagcatcactgatctgtcc
aagaaagctggggagatctggaagggcatgagcaaggagaagaaagaggagtgggagaag
aaggctgatgaggcgaagagggattatgagagagcacggaaagaatataatgagagtgga
ggatctgagtcatcaaaggagaaggtgaaaaagatgaagatcaaaggagagaagaaatct
gacaaaaagcctgagaaaaagtctgagaagaaaagctcttctaaaaccatagcaaaatca
ccagtgaaagacacaaatgagaaggacgagagcttcaagagcaaggaatttgtgtccagc
gacgagagctcctctgagagcgaggggaagaagagtgagggctcagagaaagaggaggaa
attgccagcactccacccagctctatgaactctgcatctgactctggctctgaagagtga
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