Geotrypetes seraphini (Gaboon caecilian): 117348523
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Entry
117348523 CDS
T09159
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04514
Cell adhesion molecule (CAM) interaction
gsh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117348523 (L1CAM)
04517 IgSF CAM signaling
117348523 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117348523 (L1CAM)
04090 CD molecules [BR:
gsh04090
]
117348523 (L1CAM)
04091 Lectins [BR:
gsh04091
]
117348523 (L1CAM)
Cell adhesion molecules [BR:
gsh04515
]
Immunoglobulin superfamily
L1 family
117348523 (L1CAM)
CD molecules [BR:
gsh04090
]
Proteins
117348523 (L1CAM)
Lectins [BR:
gsh04091
]
I-type lectins (Siglecs)
117348523 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
Ig_4
Fn3_VIN3
V-set_CD47
Tissue_fac
Ig_6
C2-set_2
Herpes_gE_N
Ig_Rha78A_N
Sp38
Laminin_G_3
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
117348523
NCBI-ProteinID:
XP_033776641
UniProt:
A0A6P8PM28
LinkDB
All DBs
Position
1:448491823..448802014
Genome browser
AA seq
1359 aa
AA seq
DB search
MWVCLERKQKEIPFALENTPCTSPSGFHALVGGLSSHRSTLKTPRRTCEHLHLHPFICKH
IFCVCTDCSEISCLDCSSAATVLAGLIKVCTMAADPGFILLVTPLILLLCSSVQLIQIPK
DYKMNNLTVPPTITEHSNETYVVYPNDDILLKCEGTGDPALMFRWTKDDEFFDPSKDHRI
FTTPGSGTLSIPNTNGLMVKSFQGTWRCYASNKFGTAISSNIHLVAESTPKWQKEVIRPM
TVEEGESVVLHCNPPNSTMSRRIIWMNSTLFHIVQDQRVSMGLNGNLYFANVLSQDSHPD
YTCHAQFMAARTIILKEPIELRVKPTNSVKYRKPRFLMPPGSNSIYYALRGTVLHLECIT
EGLPTPDIEWVRLNGMMPLARVSYENFKKILRISDVMEEDDGEYQCMAKNTQGSVKHNYR
VNVKAAPYWVKKPENNMYVPGETARLDCKVYGNPIPNITWRINGVPMKDLDPDPKRQIKD
GTLKLISLQTEDTAVVQCEASNQHGTLLANAYVYVTKLPPQILTQDNMQYEAVEQMTVCM
NCYAFGSPFPTIEWMRDQWTPVLEDDRYNVLTNGTLCITNAQKEYSGLYTCIATNDQDNA
TINAILDVKNATKILVPPKDTRVRIGDSAVFQCNVLFDSSFQESSMSWKKDGMEIQESDD
SSKYFIEDSNLTISSVDNTDQGMYTCMAWTQLDSVEKSAVLIVVDRPGAPYDLELSDQQD
HSVTLTWTPGNDNNSPIEDFIIEFEEDKFEPGTWHELTSVDGITHLAQLQLSPYVNYQFR
VVAVNEFGRSEASPGSERFQTAEAAPERNPGWVKGEGTNPDNMIISWENMKGLDWNGHGF
RYLVKWRLQGQAGEWHKKEVGQPPVIVQNTDIFVPYEIRVQALNDIGEGPEPKTIIGYSG
EALPDMAPENVGIEVLNRSAIKVTWSPVPKKHIRGHLGGYKIYYEMEHRIGIHGKQELRS
RRHIKHHVFIVRGDQHHATIQGLEPFSHYSLRVLVFNGKGEGPPSPAKPFQTPEGVPGEP
AFLNLKLVSDTSLSLLWDVPRKPNGHITGYFLQYQPVNKTHAGVLTNINISDPHQRRWTL
QDLDPKALYKFYLRALTAAGEGVPLIIEGSTVQEAEFPPVLNITFHSDDNSTLIQWTPRE
GQRSVEVQVRYLKKNRIAEDWQVSGSVNSTQNFYRLLKLEPGTNYRIQLMAWNHTDFMTF
WEDEVTVRGIALPNNQGSFATEGWFIGLISAIVLLILILLILCFIKRSKGGKYSVKDKED
TQVDSEARPMKDETFGEYSDNEEKPFGGGDSSQPSLNGEIKPLGSDDSLADYGGSVDVQF
NEDGSFIGQYSGKKEGGAGGNESSGAASPVNNTVVGALE
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtttgtttagagagaaagcagaaagagatccccttcgccctcgaaaacacacct
tgcacctcaccttctggcttccatgccctagtcgggggccttagctctcatcgttcaacc
ttgaaaacacctagaaggacctgtgagcacttgcatcttcatccctttatctgtaaacat
attttttgtgtgtgtactgactgttcagagatctcctgcctggattgttcatcagctgca
acagtgctggccgggttgataaaagtgtgcacaatggctgcagatccagggttcatcttg
ctggttacgcccctaattctccttctctgcagctctgtccagctcatccagatcccaaaa
gactacaaaatgaacaacttaacagtgccccctacaatcacagagcactctaatgagaca
tatgtggtgtaccctaatgatgacattttgctgaagtgtgaaggtactggagatcctgcc
ctgatgtttcgctggacaaaagacgatgagttctttgaccccagcaaggaccaccgtatc
ttcactacaccaggttccggtaccctctccattcccaacaccaacggcttgatggtgaaa
agctttcaaggcacctggcgctgctatgccagcaacaagtttggcaccgccatcagcagc
aatatccaccttgttgcagaaagtactcccaagtggcagaaggaggtgatccgaccaatg
acagtagaggagggagagtctgtggttctgcactgtaacccccccaacagcactatgtcc
aggcgcatcatctggatgaacagcacactgttccacattgtgcaggaccagcgggtctcc
atgggcttaaacggaaacctgtatttcgccaacgtgttatcccaggacagccaccctgac
tacacatgccatgcacaattcatggcggcccgtaccatcatcctgaaagaacccatcgag
ctgagggtcaaaccaacaaattcagtgaaatatcgcaagccccgttttctgatgccaccc
ggatcaaacagtatttactatgccttacgagggacagtacttcatctggagtgcatcaca
gaaggcttaccaactcctgatatcgagtgggtacgattgaatggcatgatgcctttggca
cgtgtttcctatgaaaactttaagaagatcctgcggatcagtgatgtaatggaggaggat
gacggggagtaccagtgcatggccaagaacacgcagggaagcgtgaaacataactacaga
gtgaatgtgaaagctgccccatactgggttaagaagccagagaacaacatgtacgtccca
ggggagactgctcgcctggattgtaaagtgtacggcaatcccatacctaatatcacctgg
agaattaatggagttccaatgaaagatctggatcccgatcccaagcgtcagattaaggat
gggactctgaaacttattagccttcagactgaagacacagcagtggtgcaatgcgaggct
tccaaccagcatggaactcttctggctaacgcctacgtctatgtcaccaagctcccacca
cagattctcacccaagacaacatgcagtatgaggctgtggagcagatgactgtttgcatg
aactgctatgcttttgggtcccctttccccaccattgagtggatgcgggatcagtggaca
cctgtgctggaggacgatcgttataacgtacttaccaacgggactctatgcatcactaat
gcccaaaaagagtactctggcctgtatacctgcattgccactaatgaccaagataacgcc
accatcaacgccatattggatgtgaaaaatgctacaaagatcctggtacctccaaaagac
actcgagtgaggataggggacagtgctgtgtttcagtgcaatgttctcttcgattcatcc
tttcaggagtccagcatgagctggaagaaagatggcatggaaatccaggagtcagatgac
agcagcaagtacttcattgaagattccaacctgacaatctccagcgtggacaatacagac
caggggatgtacacatgtatggcctggacccaactggattctgtggagaagagtgctgtg
ctgatagtagtggatcggcctggagccccctatgacctggagctgtcagaccagcaggat
cacagtgtcactctcacctggactcctgggaatgataacaatagccctatagaggatttt
atcattgagtttgaagaggacaaatttgagccaggcacatggcatgaattgaccagtgtg
gatggtatcacacacttagcacagctccaactttcaccctatgtgaattatcagttccga
gtggtggctgtgaatgagtttgggagaagcgaggccagtcctgggtcagagcgcttccag
acagcagaagcagctccagagaggaaccctggatgggtgaagggagaagggactaatcct
gataatatgatcatttcttgggagaacatgaagggattagactggaatgggcatggtttc
cgttacctcgtgaagtggcggctgcagggccaagctggagagtggcacaagaaagaagtg
gggcagcctccggtcatcgtccagaatacagatatctttgtaccctatgagatcagagtg
caagcattgaatgacattggggaagggccagagcccaagaccatcattggttactcagga
gaagcccttccagacatggctccagagaacgtgggaattgaggtgttgaaccgcagtgcc
attaaagtcacctggtccccggtgcctaaaaagcacatccgtgggcaccttggtggctac
aagatatattatgagatggaacatagaattgggattcatggcaagcaagagttgcgttca
cgcagacatattaagcatcatgtcttcatcgtccgtggggaccaacaccatgccacgatc
cagggactggaaccattcagccactactctctgagggttctggtcttcaacggcaaaggg
gaggggccccccagcccagccaagcccttccagactcctgaaggagtgcctggggagcca
gccttcttgaacctaaagctggtctcagacacatcactgagtctgctctgggatgtgccc
cgcaagcccaatggccacatcacaggttacttcctccagtaccagcctgttaacaagacc
catgcgggtgtcctgaccaacatcaacatttcagacccacaccaacggagatggaccctg
caagaccttgacccaaaggccctgtacaagttctatctgcgggctctgacagcggcaggt
gagggggtccccctcatcatcgagggcagcacagtgcaagaagcagaattccctcctgtc
ctgaacattacctttcattctgacgataactccacactcatccagtggaccccacgggaa
ggccagagaagcgtggaggtccaggtccgctacctgaagaaaaacagaattgctgaggac
tggcaggtctctggcagcgttaactccacgcagaatttctacaggctcttgaagctggaa
ccaggcaccaactaccgcatccagcttatggcctggaaccacacagactttatgaccttc
tgggaagatgaggtgacagtccggggcatagcacttcccaacaatcaaggcagctttgca
acagagggctggttcataggcctcatcagcgctattgttctgctaatcctcatcctcctc
attctctgctttatcaaacgcagcaaaggtggcaagtactcagtgaaagataaggaggac
acgcaggtggattcagaggctcgacctatgaaagatgagactttcggagagtacagtgac
aatgaggagaaaccatttggtggtggtgacagcagccaaccctccctgaacggcgagatc
aaaccactgggtagtgatgacagcttggcagactacggtggtagcgtggatgtccagttc
aacgaagatgggtccttcattggccagtacagtggcaagaaggagggtggggctggtggc
aatgaaagctcaggggctgcctcacctgtcaataacactgtggtgggtgccctggagtag
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integrated database retrieval system
