Geotrypetes seraphini (Gaboon caecilian): 117348533
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Entry
117348533 CDS
T09159
Symbol
FAN1
Name
(RefSeq) fanconi-associated nuclease 1 isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117348533 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117348533 (FAN1)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
117348533 (FAN1)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
117348533 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
PRP21_like_P
zf-TRAF
zf_UBZ
SHQ1-like_CS
Motif
Other DBs
NCBI-GeneID:
117348533
NCBI-ProteinID:
XP_033776664
UniProt:
A0A6P8P726
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All DBs
Position
14:complement(39366123..39450267)
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AA seq
1077 aa
AA seq
DB search
MLPQVKDVILRMAEIKPPVKKRARRSLSTSKAKKKETEKSKAAATRAPSILTFFNNAQPA
KLACPICGKMVSRFQMSEHLDESCQNAERSDDDDDVILVHSETGVPVLSNSAAEGPSASF
PVCSPQKAWRWQPNTSPVRSNSMRLLEGVKLRTSPYFKNNGEKTITREATGVPRVRSMSL
GSLSSKLSRSFQTQGRSKHSKWEENSQAKTVHYGTSSAKNQIGHSGELNSQKENWCEELE
YPAKTNALSIVTECVEREYLASDWKDQESSQAGSEMVTNLRLENTPLITLPAMRVLASAS
PSVEGKQTEMGDEATTSKEEARHAVQASSWEAQLPECSQETTEAPLNGSASLASKGKVFD
DIKSCLENSNREILPLEGFGALENEIIYNDFLKPLQESGCNGNSTENIKIQNEDVCSKSS
VSDVSWQPYYLRNFLMILQTVMENEDDLRLFNADDMSIITKFHQLTDGSQKLYVRLFQRK
LNWLKSSKIEYAEIGQDLQPVIEELVACCFLQTESELQDLSEVLEVLSASELKLLAKAFH
LANPNGQKQQLVEGFLQLAKQRSVFSLGKTQPGIGAVILKRAKELTGRCIRICRGPRAVF
SRVLLLFSLTNSMDDEEAASGGQAQLSTVLMVNMGRMTFPTYTVLRTVNIFQDREDLIRY
EGAMHKLIDIAAAMTSGNWEEAHQLYKCATKVWQEVKSHPCLRYHELLPVYLRCFTVGWT
YTRILSRGVEILQRLHMYEEAVHELENLLSQNIYCPDSRGRWWDRLALNLHQHLKHTQKA
IACIREGLSDPFVRTGHRLALCQRALRMKESSSCRKFRHLFHDLPITVVEDVIHITIKGR
MCPQSGMGKSVFLLEDIDDEMREDGTLSTCMCSVEELALAHYRKQGYDQGIHGEGSTFST
LYCLLMWDIIFMDGVPDVFRNSYQVFPLDLYTDSFFDNRRTAIESRLQLLHEASSETLAQ
LLAEVWDAQEGKAAALVNWERFTSLQQAQSLVSCLGGHFLSGVCQRLSKDLRHCRGGLPD
LVVWSTQDSKFKLVEVKGPNDRLSHKQMIWLAELQKLGAEAEVCHVAAVGSKSKRLS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgctcccacaagtcaaggacgtcatcctaagaatggcagaaataaaacctccagtgaag
aaaagagctcgaagaagcctgtccacgagtaaagcaaagaaaaaagaaacagaaaaaagt
aaggcagcagctaccagagctccatctatcctcacatttttcaataatgcacagcctgcc
aaacttgcttgccccatttgtggtaaaatggtttcaaggtttcagatgagtgaacactta
gacgagagttgccaaaatgctgaaaggagcgatgatgatgacgatgtgattctggttcat
tcagagaccggtgtgcctgtactatcaaattcagcagcagagggtcccagcgcaagtttt
cctgtgtgctcgccacagaaagcctggaggtggcaaccaaatacaagtcctgttaggagc
aactctatgagactattagaaggggtaaagctaaggactagcccctactttaagaacaat
ggtgagaaaactattactcgggaagcaacaggagttcctagggtacggagtatgtctttg
gggagtttgtcatctaaattgtctaggagcttccaaacacaaggtagaagcaagcactca
aaatgggaagagaattcacaagccaagactgttcattatggaaccagtagcgctaaaaac
cagattggccattctggtgaactaaattctcagaaagaaaattggtgtgaagaacttgaa
tatcctgcaaagaccaacgccctaagcattgtcacagaatgtgttgagagagaatatttg
gcttcagattggaaagatcaggaaagcagtcaagcaggtagtgaaatggtaactaacctt
cgtcttgagaatacaccattaataacattgcctgctatgagagttcttgccagtgcttct
ccgtctgtggaaggaaagcaaactgagatgggagatgaggcgacaacatctaaagaggaa
gcccgccatgcagtgcaagcaagtagctgggaggctcagttgccggaatgttctcaagaa
acaaccgaggcaccactaaatggtagtgcttcattggcttcgaaggggaaagtttttgat
gatattaagagttgtcttgaaaatagcaatagagaaattcttccattggaaggttttggt
gcattggaaaatgaaataatttataatgattttttaaagcctctccaggagtcgggctgt
aacggtaatagcactgaaaatataaaaatacaaaatgaagacgtctgcagcaagagttct
gtgtcagatgtttcatggcaaccatactacttgcggaatttcctcatgatcctgcagaca
gttatggagaatgaagatgacttgaggttatttaatgcagatgacatgagcatcattacc
aaattccatcagctgacagatgggagccagaagttgtatgtaagactctttcaacgcaaa
ttgaattggctaaaatccagtaaaatagaatatgcagagattggtcaagatttacagccg
gtgatagaagaattggtggcatgttgctttctgcaaacagagtctgaattacaagatctt
tctgaagtactggaggtgctgtctgcctctgagctcaaattgctggcaaaggcctttcac
ctggcaaaccccaatgggcaaaagcagcagctggtagaaggtttcctccagctggccaag
caacgctctgttttcagcctgggcaagacacagcctggcataggggcagtgatccttaaa
agggctaaggaattaactggaaggtgcattagaatttgccgaggtccccgtgctgttttc
tcccgggtcttgctgctattttcattgaccaattccatggacgacgaagaggctgccagt
ggtggacaagctcaactttctacagtactcatggtaaacatgggccgtatgacattcccc
acctataccgtgctgaggacagttaacattttccaggatagggaagatctcatcagatat
gaaggggccatgcacaagttaattgatattgcagctgccatgaccagtggaaattgggaa
gaagcccatcaattgtataaatgtgcaacgaaagtctggcaggaagtgaagagtcatcca
tgtctcaggtatcatgagctgctacctgtgtatttgcgttgtttcacagttggatggact
tatacaaggattctgtcccgaggtgtggagattctacaaagactgcacatgtatgaggaa
gctgtgcatgagcttgagaatctgttgtctcagaatatatactgtccagacagcagaggg
cgatggtgggatcgacttgccctcaatttacaccagcatttaaagcatacacagaaggcg
attgcgtgcattagagaaggtttatctgatcctttcgtccggacgggccatcggcttgct
ttgtgccagcgggcactgaggatgaaagagtcttcaagctgcagaaaattcagacacctc
ttccatgatctgcctataacagtagttgaggacgtcattcatattactataaaaggaaga
atgtgtccgcagagtggcatggggaaatctgtctttctgttggaggatatcgatgatgag
atgagagaagatggtactttgtcaacatgcatgtgttcagttgaggagttggcattggcc
cattacaggaagcagggctatgatcagggaatccatggtgaaggctcaacattcagcact
ctctattgcttactgatgtgggatataatctttatggatggtgtgccagatgtcttcaga
aattcatatcaggtcttcccattagatttgtacactgatagtttctttgacaacagaagg
actgcaattgaatccagactgcagctgctgcatgaagcctcctcagagactctggcacag
ctgctggctgaggtctgggatgctcaggagggaaaagcagcagccttggttaactgggaa
cggtttacatctttacagcaagctcagagtctggtgtcctgtcttgggggacactttcta
agtggtgtttgtcaacgattgtcgaaagatcttcggcactgcagagggggccttcctgat
ctggttgtgtggagcactcaggacagcaaatttaagctggtggaagttaaagggcccaat
gaccgtctttcacacaaacagatgatctggctggctgaactacagaagctgggtgctgaa
gcagaagtttgtcatgttgctgcagttggatctaagagcaaacgtctcagctag
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integrated database retrieval system
