KEGG   Geotrypetes seraphini (Gaboon caecilian): 117348586
Entry
117348586         CDS       T09159                                 
Symbol
ELL3
Name
(RefSeq) RNA polymerase II elongation factor ELL3 isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117348586 (ELL3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gsh01009]
    117348586 (ELL3)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsh03021]
    117348586 (ELL3)
Protein phosphatases and associated proteins [BR:gsh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117348586 (ELL3)
Transcription machinery [BR:gsh03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117348586 (ELL3)
    Little elongation complex (LEC)
     117348586 (ELL3)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing UPF0223
Other DBs
NCBI-GeneID: 117348586
NCBI-ProteinID: XP_033776767
UniProt: A0A6P8NL39
LinkDB
Position
14:complement(27888591..27974647)
AA seq 649 aa
MVMPSISLLPPPPPRYWSLPIPALQAPPSPCPGSSSLPSLPPAPPSLPPLRSWQPRVPLC
AMSRPREELCGRLSYRTEPRRSPRLSLFHLKLTDSSWRSLLDFQRSQYSGCQLSRPVISF
QGSQGYIKIPSASSTSENGVRVFAFYLSRESKDKPQSSFDCIRQGVSRFGQNQLDCVGNI
QDKITICATDESYQLTRDRMSQVEKETWSRSAIEIKPGASYHGKCVKIPKKHGLESSEDS
CTSSKRSHVFLTPAARKSHPALNNSEPRPLREWLLHLLALKPYRKLELLLRLERANISLQ
DQAELQSVLEMVGRFSPKESSYTLKEELFCQVQKDWLGYTAEEKQHMAQILLRKQSNGLS
TYAFQPPPPPLRKLQELPLKSTEVKCRAPSESRERHTSKKQKALHLSAQATMDKQWLAPS
IPSFHLTKETPKPPGSVPGNHNDFVTQSQRRQNVLEQEDRKLKEVHRRPQVVPTQVYPSN
KKPKRHKEQEEEEEQESSEGEEDDDWEEEALRLERYLSYPEDKAQPTESVPASAEMPDYF
LKYSPITSVEQQQAYEEDFSADYAEYRNLHAKIGKVTERFMQLGSKMKKLNPGTAEHKVI
EDKILAEYRKFKKTYPGYREEKRRCEYLHQKLSRIKHLIVEYEEKNMSL
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggttatgccatccatttctcttcttccccccccccccccccggtactggtctctcccc
attcctgctctccaagctcctccctctccctgccctggctcctcctcccttccctcgctg
ccgccggcccctccctccctccctccgctccgcagctggcagccccgggtgccactgtgc
gctatgtcgcggccgcgggaggagctttgcgggcggctctcgtaccggaccgagccccgc
aggagcccccgtcttagcctcttccacctcaagctcaccgactcctcttggcgctccctg
ctggacttccagcgatcccagtattctggatgccagctgtctcggcctgtgatctccttc
caggggagccaggggtacatcaaaataccttctgcaagcagtacctctgaaaatggagtt
cgtgtctttgccttctacctctctcgggagagtaaagataagcctcagtccagctttgac
tgtatccggcagggggtgtccaggtttggccaaaaccagttggattgtgtagggaacatc
caggataaaataacgatttgtgcgacagacgaatcctaccagctgacacgtgaccgaatg
tctcaggtggagaaagaaacatggagtaggagcgccatcgagatcaaacctggggcctca
taccacggtaaatgtgtgaagattccaaagaaacatggactggaatcctctgaggacagt
tgcacatctagcaaacgttcgcatgtctttttgacaccagcagccagaaaaagccatcct
gctttgaacaatagcgagcccaggcctcttcgggaatggctgctacacttgctggcactc
aagccttatcggaaactggagcttctcctacgactggaacgggcaaatattagcctgcag
gatcaggcagagctgcagtctgtgctggaaatggtaggaaggttcagtcccaaggaaagc
agctataccttgaaggaagagctcttctgtcaggtgcagaaggactggctgggatacaca
gctgaggagaagcagcatatggcacagattttgctcaggaaacagtccaatggcttatca
acatacgctttccagccgccaccgcctcctttacggaagctgcaagagctcccccttaag
tctacagaagtgaaatgcagagcaccttcagagagcagagaaagacacacaagcaaaaaa
cagaaagcattacatttgtctgcacaggcaaccatggacaaacagtggctggctccgtcc
attcccagttttcatcttaccaaagagaccccaaagcctccaggctctgtgcctgggaac
cacaatgactttgtaacccaaagtcagaggaggcagaatgtgctggaacaggaggacaga
aagttgaaagaagtgcaccgccggcctcaggtcgtcccaacccaggtttatccatcaaat
aaaaaaccaaagagacacaaagagcaggaggaagaggaagaacaagaatctagtgagggg
gaagaagatgatgactgggaggaggaagccctcaggctcgaacgctacctttcctatcca
gaagataaggcacagcccacagaatctgttccagcctctgcagaaatgccagattatttc
ctcaaatacagtccaattacttcagtggaacagcagcaagcatatgaagaagactttagt
gcagattatgcagaataccgaaaccttcacgcaaagattggcaaagttacagagagattt
atgcagctgggatctaaaatgaagaaactgaatccaggaacagcagaacacaaggtgatt
gaagataaaatattagcagaatacagaaaattcaaaaagacatatcctggatacagggaa
gaaaagagacgatgcgagtacttacatcaaaaattatcacgtattaagcatttaattgtg
gaatatgaagagaagaacatgtctttatag

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