Geotrypetes seraphini (Gaboon caecilian): 117348628
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Entry
117348628 CDS
T09159
Symbol
EFL1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117348628 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsh03009
]
117348628 (EFL1)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
Pre-60S particles
GTPases
117348628 (EFL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
Septin
DUF6847
Motif
Other DBs
NCBI-GeneID:
117348628
NCBI-ProteinID:
XP_033776851
UniProt:
A0A6P8PQ57
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All DBs
Position
14:25513192..25705225
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AA seq
1127 aa
AA seq
DB search
MGVTSLEKIIELQKNPGNIRNICILAHVDHGKTTIADCLISSNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYEEDGQEFLINLIDSPGHVDFSSEVSTAVRLCDGSVIVVDAV
EGVCPQTQAVLRQAWLENIRPVLLINKLDRLIVELKLTSQEAYTHLQKILEQVNAVTGAL
FTSKVLEERADKDTENQMIAETVDGEQVYDWSAGLEETDDSHLYFSPEQGNVVFASAIDG
WGFSTEQFAQLYSQKVGIKALVLLKTLWGDYYLNTKAKKIMKGAQAKGKKPLFVQLVLDN
IWNLYDVVLKREKEKIDKIVSSLGLKISTRESRHSDPKVHLSAICSQWLPVSQAVLSMVC
RKCPSPLDIPAERVERLMCVGARRFDSFPPETQELKSAFMSCSSKDTAPVIIFVSKMFAV
DAKGLPQNRQRPLTQEEIAQRRDVARQRHAEKNVADQGKQLTEERSPDTESKMTSNIRQK
GEELQFTSEMENLTLKPEKQEADKESFIAFARVFSGVVRRGQKIFVLGPKYDPAEILAKL
PSGCSPASDLPSVPHMACSALENLYLLMGRELEELEEVPPGNVLGIGGLEEFVLKSATLS
TSPACPPFTPLNFEAAPIVRVAVEPKHPSEMPQLVRGMKLLNQADPCVEVLIQETGEHVL
VTAGEVHLQRCLDDLQERFAKIQISASEPIIPFRETITRPPKVDMVNEEIGKQQKVAVIH
QVKEEQNKTPEGVQVDSDGLVTVSTPNKLATLSVRAMPLPEEVTQLLEENGNLVRTMEQI
NLTLNEGNNTHEINRKTLDDILAFKQKLEQHFQGRKWRNTVDQIWSFGPRRYGPNILVNR
LEGYQRPSVWQCLEKMTKETGKYRDFDNSIVSGFQLATLAGPMCEEPLMGVCFVMEKWDM
SRAQQLIEFSRQDSREFAASEDYITDSFSEGKEFQGNSQSDVKSLEKIGKRRGEALLTDC
YGPFSGQLIATMKEACRYAFQAKPQRLMAAMYTCEIMATAEVLGRVYAVLSKREGRVLLE
EMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLIFTHWEVICSDPFWVPTTEEE
YLHFGEKADSENPSRKYMNSVRKRKGLYVEEKIVEHAEKQRTLGKNK
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttactagcttggaaaaaattatcgaactacagaagaatccgggaaacataagg
aacatatgtattttagctcatgtggatcacgggaaaactacaatagctgactgtcttata
tctagcaatggaataatatctagccgactggcaggaaagctgaggtatttggacagcaga
gaagatgaacaaatccgtgggattacaatgaagtccagcgccatatcactgcactatgaa
gaagatggccaggagtttctcatcaatttgatcgactccccagggcatgtggatttctct
tcggaagtatcgactgcagtgcggctctgcgatggatcagtcattgtcgtggatgctgtt
gaaggagtttgcccgcagacacaggcagttctgcgacaagcctggctcgaaaacatccgt
cctgtactgctgataaataaattagatcgtttgatagtggagctgaaactgacttcacag
gaagcttatacacatcttcagaaaatcttagaacaggtgaacgcagtgactggagctcta
tttacttcaaaagttctggaagagcgagctgataaagacacagaaaatcaaatgattgct
gagacggtggatggagaacaggtttacgactggagtgcaggcttggaggagacggacgat
tcgcacctgtacttctcgcctgaacagggcaatgtggtgtttgccagcgcgatagatggc
tggggcttcagcactgagcagtttgcccagctgtacagtcaaaaggttggcatcaaagct
cttgtacttctgaagaccttatggggtgattactacttaaacaccaaggcaaagaagata
atgaaaggggcccaggcaaaaggcaagaaaccactgtttgtgcaactggtgctggacaac
atctggaacctctatgatgttgtcctgaaaagagagaaagagaaaattgataaaattgtc
agctctttaggattaaaaatcagcacccgggaatctcgtcattcagaccccaaggtgcac
ctcagtgccatttgtagtcagtggctgccagtctcccaggctgttctctctatggtctgt
cgcaagtgccctagtcctctcgatattcccgcagagcgagtggaaaggctcatgtgtgtt
ggtgctcgaagatttgactcgttcccacctgagacgcaagaactgaaaagcgctttcatg
agctgcagtagtaaagacacagctccggtcatcatctttgtttctaaaatgtttgcggtg
gatgcaaagggtttaccacagaacaggcaaaggcctctaacacaagaagaaatcgctcaa
aggcgggacgttgcaaggcaaagacatgcagaaaagaatgtggcggatcagggaaagcag
ctcacagaagaaagatctcccgatactgagtctaaaatgacttcaaacattagacaaaaa
ggtgaagagctacagttcactagtgagatggagaacttgaccttaaaaccagagaagcag
gaagcagacaaggagtcttttattgcatttgccagagtgttcagtggtgtggtgaggagg
gggcaaaagatcttcgttctgggaccaaaatatgatcctgctgaaattttagctaagttg
ccttccggttgttctcctgcaagcgatcttccgtcggtaccgcacatggcttgttctgca
ctagaaaatctctacttgctgatgggcagagaactggaggagctcgaagaagtgccacca
ggcaacgtgctgggtataggaggactagaggagtttgtgctgaagtcagcaacgctgtca
acgtccccagcttgtcccccattcacacctcttaactttgaagccgcaccaatcgtgagg
gttgctgttgaaccaaaacatccaagtgagatgcctcagctggtgagaggcatgaaactt
ttaaaccaagctgatccctgtgtggaagttttaatccaggagacaggggaacatgtcctc
gtcacagcaggagaagtacacctgcagcgctgcttggatgacttacaggaaaggtttgca
aagattcaaatcagcgcttcagaaccaattatcccattccgagagacaattactcgacca
cctaaagtagacatggtaaatgaagaaattggaaagcaacagaaggtcgccgtcatacat
caggtgaaggaagagcaaaacaaaaccccggaaggagtccaggttgattcagatggcctc
gtaacggtgtcaaccccaaataagctcgccacgctcagtgtaagagccatgccgcttcct
gaagaagtgactcagcttctcgaagagaacggcaatttagttcgtacgatggaacaaatc
aacttgactttgaacgagggaaataatacccatgaaattaatcgcaaaaccctggatgac
attcttgcatttaaacagaaactagagcagcattttcaagggagaaaatggagaaatact
gttgaccagatatggtcttttggtccacgaagatatggaccgaacattttagtgaatcgg
ttagagggctatcagagaccatcggtatggcagtgtctagaaaagatgacgaaggaaacg
ggcaaatatcgagactttgacaatagtatagtaagtggatttcagctggctacacttgca
ggaccaatgtgtgaagaacccttgatgggtgtttgttttgttatggaaaaatgggacatg
agccgagctcagcaactaatagaattcagtaggcaggattcaagagagtttgctgcctcc
gaagattatatcactgattctttcagtgaaggtaaagaattccaaggcaacagtcaaagt
gatgtcaagtcactggagaaaattggtaaacgtcggggtgaagcgttgcttacagattgc
tatggtcctttttctggacagttaattgccaccatgaaggaagcctgtcgttacgcattc
caagcaaaaccccagcggcttatggcagctatgtacacttgtgaaattatggcaacggca
gaagtattaggtcgtgtctatgctgttttgtcgaaaagagaaggtcgagtcttactggaa
gagatgaaagaaggaacggacatgttcattatcaaggcagtgctgccagtggcagaaagc
tttggcttcgctgatgaaattaggaagaggactagtggtctggctagtccacagctgatc
ttcacccactgggaggtcatatgcagtgatccgttctgggtaccgactactgaagaggaa
tatctgcactttggagaaaaggccgactcggagaacccatcccgcaagtacatgaactcg
gtgaggaagcggaaaggactttatgtggaggagaagattgtggaacatgctgagaagcag
aggactcttggcaaaaacaaataa
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