Geotrypetes seraphini (Gaboon caecilian): 117348784
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Entry
117348784 CDS
T09159
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117348784 (APEX2)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117348784 (APEX2)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117348784 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
117348784
NCBI-ProteinID:
XP_033777156
UniProt:
A0A6P8PNR9
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All DBs
Position
1:complement(451359990..451385442)
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AA seq
530 aa
AA seq
DB search
MFWRQLLILLPPRSTMRIVSWNINGIRATKTGLKGTLESLQADIICLQETKVTRDLLDEP
NAIVDGYNSYFSFSRGRSGYSGVATFCRDSVMPLAAEEGLSGLLTSNNGAIGHYGNTDEF
SDEELQALDSEGRAVLTQHKILLSEGREETLTLINVYCPRADPEKPERKSFKLHFYRLLQ
ARAEAILNAGGHVIILGDINTSHRPIDHCDPDSLEIFDENPSRKWLSQFLGDPGGTCASS
APPEERDGPESSRAARGRFLDSFRYFHPAQPNAFTCWSSATGARHTNYGTRIDYILGDAA
LVRELFQDSDLMPEVEGSDHCPVRAHLRCKVLPAPRCPPFCTRYLPEFAGRQQKLLQFLV
KVDKGRNCTDKEAAKVFLESKEKRANQVSLGSKQGLLSGQKRNEAATLQKCAKRSKLGPS
SGQGSLLRFLKPVEARATNPHPLTKTTLEEPAPRLETPPVEFWKSVLRGPSPPPLCKGHG
ETCVLRTVKKAGPNNGKQFYTCARPEGHVSNPQARCNFFQWVTRKAGHPS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgttctggaggcagctcttaatcttgcttcccccaagaagcaccatgaggattgtcagc
tggaatattaatggcatcagagcaaccaaaactgggctgaaagggaccctggagtctctg
caggcagatattatctgtctccaggagaccaaagtgaccagagatctgctggatgaacca
aatgccattgtagacggctacaactcttatttcagcttcagccgtgggaggagcgggtac
tctggggtggcgactttctgcagagatagtgtgatgccactggctgctgaggagggtctc
tcgggactgctgaccagcaacaacggagccattggtcactatggaaacacagatgagttt
tcagacgaggaactgcaggctcttgacagtgaaggcagggctgtcctcacccaacacaag
atccttctctcagaggggagagaggaaaccctaactctcataaatgtgtactgcccgagg
gcagacccagagaagccagaacggaagagcttcaagctgcacttttatcgcctcctgcag
gccagggcagaggccattttaaatgctggtggacatgtaattatcctaggtgacataaat
acatctcacagacccattgaccactgtgaccccgacagtctggaaatctttgatgagaac
ccaagccggaagtggctgagtcagttcctgggggatccaggaggaacctgtgccagctct
gcaccaccagaggaaagagatggtccagagtcatcaagggcagcaagaggacgctttctt
gacagcttccgttactttcatccagcacagcctaacgcctttacatgctggtcttccgcc
accggtgcccggcacaccaactatggcacacggatagactatatccttggggatgcagca
ttagtaagggaactcttccaggattctgatctgatgccagaagtggagggttcagaccac
tgtcctgtcagggctcacttgaggtgcaaggtgctgccagcccccagatgcccaccattt
tgtacccgatacctgccagagtttgctgggaggcagcagaaactgctacagttcctggtg
aaggtggataagggaaggaactgtactgacaaagaggctgctaaagtgttcctagaaagc
aaagaaaagagggcaaaccaggtatccttagggagtaagcagggacttctctctggccag
aagcgcaatgaggcagcaactcttcagaaatgtgctaagcggtctaagctggggcctagc
agtggacagggaagcctcctccgcttcctcaaacctgtagaggccagagcaacgaatccc
caccccctgacaaagacaacgttggaggagccagcgcctcgtttggaaaccccaccagta
gagttttggaaatcggtgctaaggggtccctccccaccacctctctgcaagggccatggg
gagacctgtgtgctgcgaacagtcaaaaaggcaggccccaacaacggcaaacagttttac
acgtgtgcacgccctgagggacatgtctccaacccccaggcacgctgcaactttttccag
tgggtcacaaggaaggcaggacacccttcctaa
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