KEGG   Geotrypetes seraphini (Gaboon caecilian): 117348832
Entry
117348832         CDS       T09159                                 
Symbol
KDM5C
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gsh01009]
    117348832 (KDM5C)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gsh03036]
    117348832 (KDM5C)
Enzymes [BR:gsh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117348832 (KDM5C)
Protein phosphatases and associated proteins [BR:gsh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117348832 (KDM5C)
Chromosome and associated proteins [BR:gsh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117348832 (KDM5C)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD
Other DBs
NCBI-GeneID: 117348832
NCBI-ProteinID: XP_033777257
UniProt: A0A6P8NMC3
LinkDB
Position
1:complement(451534156..451796116)
AA seq 1507 aa
MESEDWLPPPECPVFEPTWKEFKDPLGYIAKIRPIAEKSGICKIRPPVDWQPPFAVEVDN
FRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVMEE
GGYEAICKDRRWARVAQLLNYPTGKNIGSLLRSHYERIIYPYETYQSGANMVQCGARPDY
DSEEKDKEYKPHSIPLRQSFQPSKINSYGRRAKRLQQEDPETLTDPTAGGPAPLPTHAPE
SWPEPTEEDIEKNPELKKLQIYGAGPKMMGLGLMAKDKNLRKKDKDCPECPPTLVVKEES
GVDLKRESASPRRFVDVKEEASLSPEPCTKMTMRLRRAHGNSQSVDSYICRICARGDEDD
KLLLCDGCDDNYHIFCLLPPLPEIPKGIWRCPKCVMAECRRPPEAFGFEQATREYTLQSF
GEMADTFKADYFNMPVHMVPTDVVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPMSD
NSGRLSPEEEAYASSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIED
HWSYSINYLHWGEPKTWYGVPSSAAEHLEEVMKKLTPELFESQPDLLHQLVTLMNPNTLM
AHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLTAGRQCIEHYRRLR
RYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFVIVQEERRLRKALLEKGITEAEREAF
ELLPDDERQCDKCKTTCFLSALACYSCPECLVCLYHIDDLCKCPSSKHYLRYRYTLDELP
AMLHKLKVRAESFDTWATKVRTALEVEDGRKRTLEELRTLESEAQERKFPENGLLQQLRS
TIGEAEACMSETLALVCNKKPTRIHSSKLTVNELRTFLEQISSLPCLIQQLSDVKELLEK
VEAFQWQAQVALTDESSNSLQLHELLEKGSQLDVDIPELDQLQLQLRQAEWLNEVKEALA
SPEEPVTLQTMRALMEAGSSVTQSTAVEKAMTELQDLLSISQRWEEKAQMCLEARQRHPP
ATLEAIIKEAESIPVCLPNILVLKEALCKARAWIADVEEIQNGDHYPCLDDLEGLVAVGR
DLPVRIEELRQLEVQVLTAHSWREKACKTFLKKNSCYTLLEVLCPCTDAGSDSFKRSKRK
QKELGLYKSDTESLGLSAQDLRDPGSVILAFKEGEQKEKEGILQLRKSNQHKACGQEVNP
EEQVEVCMCGQPPTDLMLQCNLCQDWFHGSCVPCPKLGGQKHSLAWWDWSTKFLCSLCMR
SRRPRLETILSLLVALQKLPVRLPEGEALQCLTERAITWQDRARQALATQEVATLLEKLN
ELRQRLQSDMTKEMMALKESTWNEQQQKMQVPLENGDKVTENGNGVLSDLDMISSCFSRL
CGPVLDLSEPARLQLEEIMMEGELLEVTLDEEQRIWRVLQAAQPPDLDKLRKLVEIEKAE
RQAMKMKGRDAEKKKKRRCTRGQSSPQAKEELEPKRTRTELERQEDPDEDEMGQEEALEC
NQNGREL
NT seq 4524 nt   +upstreamnt  +downstreamnt
atggagtcagaagactggcttcctcctcctgagtgtcctgtttttgagcctacatggaaa
gaatttaaagaccccttgggatacatagcaaaaataaggcccattgcggagaaatctggg
atctgcaagatcagaccacctgtggactggcaacctccctttgcagtggaagtagataat
tttcgtttcacccctcgtattcagagattaaatgaactggaggcacaaactagggtgaaa
ctgaactacctcgaccagattgccaagttctgggagatccaaggctcttcattgaagata
ccaaatgtggagcgacgaatcttggatctgtatagcctcagcaagattgtcatggaggaa
gggggctatgaggccatctgcaaagatcgccgctgggcccgagttgcccagctgcttaat
taccctactggcaagaacattggttccttgctgcgctcccattatgaacgcatcatttat
ccctatgaaacttaccagtccggtgccaatatggtgcagtgcggggcccgtccagactat
gacagtgaagagaaggacaaggagtacaagccacacagtatccccctacgccagtcattt
caaccatccaaaatcaatagctatgggcgtagggcaaagcgtctgcaacaggaggatccc
gagactttgactgatccgacagcaggcggcccagctccgctaccgacacacgcccctgaa
tcatggccagaacccactgaggaggacattgagaaaaacccagagctgaagaagctacag
atctatggagcagggcctaaaatgatggggctgggtctcatggctaaagacaagaatcta
cgcaagaaagataaagattgtcctgagtgccctcctacactagtggtgaaagaagagtct
ggtgtagacttgaagcgagaatctgcatccccacggcgttttgtggatgtaaaagaagaa
gcatcccttagtcctgagccctgcaccaaaatgacaatgcgtctgcgacgagctcatggc
aatagtcagtcggtggactcctacatatgtcgcatatgtgctcgaggagatgaagatgac
aagctgttactgtgtgatggttgtgatgacaattaccacatcttctgcctcctgcctcct
ttgcctgaaattcctaagggcatctggagatgtcccaaatgtgtgatggcggagtgccgc
agacccccagaggcatttggctttgaacaggctacacgagagtatacgctgcaaagtttt
ggagagatggctgacaccttcaaagcggattacttcaacatgccagtgcacatggttccc
acagatgtggtagagaaggagttttggcgtttggtgaatagcattgaagaagatgtgact
gtggagtatggtgctgatattcactccaaggagtttggtagtggatttcctatgagcgac
aacagtggcaggctgtctccagaggaagaggcatatgcgtccagtgggtggaatctaaat
gtgatgccagtgctggagcagtctgtcctgtgccacattaatgctgatatctctggcatg
aaggtgccctggctgtatgttggcatggtgttctctgccttttgctggcatattgaagat
cactggagctactccattaactacctccactggggagagccaaagacatggtatggtgtt
ccctcctctgcagcagaacacctggaagaggtgatgaagaagctcactccagagctcttt
gaaagccagcctgatctcctgcatcaactggtgactctcatgaatcccaacacactgatg
gctcatggtgtgccagttgtccgaaccaatcagtgtgcaggagagtttgtcatcaccttc
cctcgtgcctatcacagtggcttcaaccagggttacaattttgccgaggctgtcaatttt
tgtactgcagattggctgacagctgggcggcagtgcattgagcattatcggcgtttgcgc
aggtactgtgtcttctcgcatgaggagcttatctgtaagatggctgcctgccctgagaag
ctggacctgaatctggcagcggccgtgcacaaggagatgttcgttatcgttcaggaagaa
cgccgactgcggaaggccctgcttgaaaagggtattacggaggcagagcgtgaagctttt
gagttgctccctgatgatgagaggcagtgtgacaaatgtaaaactacctgcttcctatca
gccttagcttgttatagctgtcccgagtgccttgtctgcctgtaccatatcgatgacctc
tgcaagtgcccctccagcaagcactacctgagatatcggtatactttggatgaactacct
gccatgttgcataagctgaaagttcgagctgagtcctttgacacttgggcaaccaaagtg
aggactgctttggaagtggaggatggacgaaaaagaacattggaagagctgcggactcta
gagtcagaggcacaggagagaaagtttcctgagaatgggctactccagcagctgcggagc
acaattggagaggccgaggcatgtatgtctgagaccctggcacttgtatgcaacaagaag
cccacccggatccattcttccaagctgacagtaaatgagctccggaccttcctggaacag
attagctcgttgccctgcctcattcaacagctctcagatgttaaggagctgctggagaag
gtggaggcattccagtggcaggcacaggtggctctgacagatgagtcctctaattcccta
cagctgcatgagcttctagagaaagggagccagttggatgttgacataccagaactagat
cagctgcagctgcagttgagacaagcagagtggttgaatgaggtgaaagaggcattggct
tcaccagaggaaccagtcacgcttcagactatgcgagcactgatggaggcaggcagcagt
gtgacacagagcacggctgtggaaaaagccatgacagagctacaggatcttctcagtatt
tctcagcgctgggaggagaaagcacaaatgtgcctagaagccaggcagaggcatccacca
gctactctagaggccatcatcaaggaagcagagagcatacctgtgtgtctgcctaatatc
ttggtactgaaggaagcgctttgcaaagcccgggcctggatcgctgatgttgaggaaatt
cagaatggggatcactacccatgcctggatgacctggagggacttgtggctgtgggacgg
gacctgccggtccggatagaggagctgaggcaattagaggtgcaagtgcttacagcccat
tcctggagggaaaaggcttgcaagacctttctgaagaagaactcttgctacacgctgctt
gaggtgctctgtccatgtacagatgcaggctccgatagttttaaacgcagtaagcggaag
cagaaggagctggggctatataaatcagacacagaaagcttaggactgtcggctcaagac
cttcgagaccctggatcagtaatcctggcctttaaggaaggagaacagaaggaaaaagaa
gggattctgcaactgcggaagtctaaccagcacaaggcatgcgggcaggaggtgaatcct
gaggagcaggtggaagtttgcatgtgtggccagcctcccacggacctcatgttgcagtgc
aacctttgccaggactggttccatggctcatgtgtgccctgccccaagctgggcggtcaa
aaacactctttggcctggtgggactggtccacaaaattcctgtgctctctgtgcatgcgc
tcacgtcggccacgcctggagacaatcctttcactgttggtagccttgcagaagttgcca
gtcaggctgcctgagggagaagctctacagtgcttgacagaaagagccatcacctggcag
gaccgggcacggcaggcactagcaacccaagaagtagcaactcttctggagaaattgaat
gagctgcgacagcggctgcagagtgacatgactaaggagatgatggcactgaaggagagc
acatggaatgaacagcagcagaagatgcaggttccacttgaaaatggggacaaggtgact
gagaatggcaatggtgtactttcagacttagatatgatctcttcttgcttttcccggctc
tgtggcccagtcctggatctgtcggaacctgctcgactgcagctagaggagataatgatg
gaaggagaactgctggaggtaacactggatgaggaacagagaatctggagggttctgcaa
gcagcccagccaccagacttggacaagttgcgtaaactggttgagattgaaaaagccgag
cgtcaagcaatgaagatgaaaggcagggatgctgagaagaagaagaaacggcgctgtacc
aggggtcagtcctcaccccaggccaaggaggaactggaaccaaagagaacacgaactgag
ctagagagacaggaggatccagatgaagatgagatggggcaggaagaggctctagagtgt
aaccagaacggcagagagttatga

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