Geotrypetes seraphini (Gaboon caecilian): 117348862
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Entry
117348862 CDS
T09159
Name
(RefSeq) polyubiquitin-C-like
KO
K08770
ubiquitin C
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03320
PPAR signaling pathway
gsh04120
Ubiquitin mediated proteolysis
gsh04137
Mitophagy - animal
gsh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117348862
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117348862
04137 Mitophagy - animal
117348862
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117348862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117348862
Ubiquitin system [BR:
gsh04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117348862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
117348862
NCBI-ProteinID:
XP_033777320
UniProt:
A0A6P8P927
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Position
15:38030665..38035322
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AA seq
765 aa
AA seq
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MQIFVKTLTGKTITLEVECSDTIENVKCKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDTIENVKCKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDTIENVKC
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVECSDTIENVKCKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVECSDTIENVKCKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDTIENVKCKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDTIE
NVKCKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVECSDTIENVKCKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVECSDTIENVKCKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDTIENVKCKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMPVFM
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctgacaggcaagaccatcacactagaagtggaatgcagt
gacaccattgagaatgtgaaatgcaaaatccaagacaaagaaggaattcctcccgaccag
cagagattgatctttgccggcaagcaactggaagatggtcgcaccctttctgattacaac
attcagaaggaatccactcttcaccttgtgttgaggctcagaggaggtatgcagatcttt
gtgaaaaccctgacagggaagaccatcacactagaagtggaatgcagtgacaccattgag
aatgtgaaatgcaaaatccaagacaaagaaggaattcctcccgaccagcagagattgatc
tttgccggtaagcaactggaagatggtcgcaccctagctgattacaacattcagaaggaa
tccactcttcaccttgtgttgaggctcagaggaggtatgcagatctttgtgaaaaccttg
acagggaagaccatcacactagaagtggaatgcagtgacaccattgagaatgtgaaatgc
aaaatccaagacaaagaaggaattcctcctgaccagcaaagattgatctttgccggcaag
caactggaagatggtcgcaccctttctgattacaacattcagaaggaatccactcttcac
cttgtgttgaggctcagaggaggtatgcagatctttgtgaaaaccctgacagggaagacc
atcacactagaagtggaatgcagtgacaccattgagaatgtgaaatgcaaaatccaagac
aaagaaggaattcctcccgaccagcagagattgatctttgccggtaagcaactggaagat
ggtcgcaccctttctgattacaacattcagaaggaatccactcttcaccttgtgttgagg
ctcagaggaggtatgcagatctttgtgaaaaccctgacagggaagaccatcacactagaa
gtggaatgcagtgacaccattgagaatgtgaaatgcaaaatccaagacaaagaaggaatt
cctcccgaccagcagagattgatctttgccggtaagcaactggaagatggtcgcacccta
gctgattacaacattcagaaggaatccactcttcaccttgtgttgaggctcagaggaggt
atgcagatctttgtgaaaaccttgacagggaagaccatcacactagaagtggaatgcagt
gacaccattgagaatgtgaaatgcaaaatccaagacaaagaaggaattcctcccgaccag
cagagattgatctttgccggtaagcaactggaagatggtcgtaccctttctgattacaac
attcagaaggaatccactcttcaccttgtgttgaggctcagaggaggtatgcagatcttt
gtgaaaaccctgacagggaagaccatcacactagaagtggaatgcagtgacaccattgag
aatgtgaaatgcaaaatccaagacaaagaaggaattcctcccgaccagcagagattgatc
tttgccggtaagcaactggaagatggtcgcaccctagctgattacaacattcagaaggaa
tccactcttcatcttgtgttgaggctcagaggaggtatgcagatctttgtgaaaaccctg
acagggaagaccatcacactagaagtggaatgcagtgacaccattgagaatgtgaaatgc
aaaatccaagacaaagaaggaattcctcccgaccagcagagattgatctttgccggtaag
caactggaagatggtcgcaccctagctgattacaacattcagaaggaatccactcttcac
cttgtgttgaggctcagaggaggtatgcagatctttgtgaaaaccctgacagggaagacc
atcacactagaagtggaatgcagtgacaccattgagaatgtgaaatgcaaaatccaagac
aaagaaggaattcctcccgaccagcagagattgatctttgcaggtaagcaactggaagat
ggtcgcaccctttctgattacaacattcagaaggaatccactcttcaccttgtgttgagg
ctcagaggaggtatgcagatctttgtgaaaaccctgacagggaagaccatcacactagaa
gtggaatgcagtgacaccattgagaatgtgaaatgcaaaatccaagacaaagaaggaatt
cctcccgaccagcagagattgatctttgccggtaagcaactggaagatggtcgcaccctt
tctgattacaacattcagaaggaatccactcttcaccttgtgttgaggctcagaggaggt
atgccagtgtttatgtaa
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