Geotrypetes seraphini (Gaboon caecilian): 117348904
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Entry
117348904 CDS
T09159
Symbol
USP48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsh01002
]
117348904 (USP48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117348904 (USP48)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117348904 (USP48)
Peptidases and inhibitors [BR:
gsh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117348904 (USP48)
Ubiquitin system [BR:
gsh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117348904 (USP48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
Motif
Other DBs
NCBI-GeneID:
117348904
NCBI-ProteinID:
XP_033777427
UniProt:
A0A6P8NMR8
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All DBs
Position
15:complement(4010855..4184797)
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AA seq
1039 aa
AA seq
DB search
MAPRLQLEKAAWRWTEAVRPEEVGPEHIAMAYRVCLEPCVRGICRRNCKGNPNCLVGIGE
HVWLGEIDENSFHNIDDPNFERRKKNTFVGLTNLGATCYVNTFLQVWFLNMELRQALYLY
ENAWSAEKAEECIQEDKEYEPQTICEHLQYLFALLQSSNRRYIDPSGFVRALGLDTGQQQ
DAQEFSKLFMSLLEDTLSKQKTPDVRNIIQKQFCGQYAYVTVCNQCGRESKLLSRFYELE
LNIQGHKQLTDCITEFLKEEKLEGDNRYFCETCQSKQNATRKIRLLNLPPTLNLQLMRFV
FDRQTGHKKKLNTYIGFSEILDMRPFMEQTGDKSLYELSAVLIHRGVSAYSGHYIAHVKD
PQTGDWYKFNDEEIEKMEGKKLQLGIEEDLAETSKSQTRKPKCGKGTHCSRNAYMLVYRL
QTQELQEKETEVVEVPAFLQKLVELDNCKFEEWCIEMSEMRKQSVDKGKAKHEEVKELYQ
RLPAGADVPYEFISLEWLQKWLDESTPTKPIDNSKCLCSHGKLHPDKISIMKRISEFAAD
TFYSRYGGGPRLNAEALCKECVVERCRVLRMKNQLNEDYKIISNLVKVTLHSEGYWIGKA
SLRSWRQLALEQLDDQEDEIDHTNGRMNGDILNKEESQEDRRDDNEELSFNEDILCPHGG
LCISENERKIISEEAWQRLKNYFPKAPEFSVNQESCSQCKILEKEGEENEALNKMMAIEQ
KTTLPNLFQDKSRPSITNWPQETNILYVVSQFFVEEWRKFVRRPTKCSPVSSIGNSALLC
PHEGLMFDFATMTKEDSKLIALIWPSEWEMMQKLFVVDRAIRIVKTEKPESNVANPVYMS
EPKLCPECREGLLFQQQRDMREYTQATIYVHKVVHNKKVMECASELNMSSSEAEEEKEEP
KPEGEIDPDFNQTNDGSVKRQKVSNQGYAICQKQNIRRSTRHRKVRGEKALLVSANQTLK
ELKIQIMHAFSVAPFDQNLSIDGKVLNDDSATLGTLGIIPESVILLKADEPIADYATMDD
AMQVCLPEEGFKGTGLLGH
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggctccgcggctgcagctggagaaggcggcctggcgttggacggaggcggtgaggccc
gaggaggtggggccggagcacatcgccatggcctacagggtctgcctggagccctgcgtg
cgcggcatctgcagaaggaactgcaaagggaacccaaactgcttggttggcattggtgag
catgtttggttaggagaaatagatgaaaatagtttccacaatattgatgatccaaacttt
gaaaggaggaagaagaacacatttgtgggcttgacgaaccttggtgcaacttgctatgtg
aacacttttctgcaggtctggtttcttaacatggaactcagacaagcactttacttgtat
gagaatgcttggagtgcagaaaaagcagaagagtgtatccaggaagacaaagaatatgaa
cctcaaacaatttgtgaacacttgcaatacttgtttgcattgctacagagcagcaatcgg
cgatatattgacccatctggatttgttagagcacttggattggatactggacagcagcag
gatgcacaagaattttctaagctattcatgtcactgttggaggatacattgtccaaacag
aaaactccagatgtgcgaaatatcatccagaaacagttctgtgggcaatatgcatatgtt
actgtttgcaaccagtgtggcagagaatctaaactcttatccaggttttatgaactggag
ttgaatatccaagggcacaaacagttaacggactgtatcacagagtttcttaaggaagaa
aagttagaaggagacaatcgctatttctgtgaaacctgtcaaagtaaacaaaatgcaaca
agaaaaatccgtctcctcaaccttccaccaacactcaatcttcagctcatgcgatttgtt
ttcgacaggcaaactggccacaagaagaaactgaacacctacattggtttctctgagatt
cttgatatgagacctttcatggaacaaacaggtgacaagtctttatatgaactgagtgct
gttcttatacatcgtggtgtgagcgcctactcagggcactacatagctcatgtgaaggac
cctcaaactggtgactggtacaagtttaatgatgaagagatagaaaagatggaaggaaag
aaattgcaactagggattgaggaagacctagcagagacttctaaatcacaaacccgtaaa
cctaaatgtgggaaaggaactcattgttctcgaaatgcttacatgttggtttacagactg
cagacacaagaactgcaggagaaagagaccgaagtagtagaagtgccagcttttctgcag
aaattggtggaactggataattgcaaatttgaggaatggtgtattgaaatgtcagaaatg
cgtaaacagagtgtggacaagggtaaagccaaacatgaagaggtgaaggagctctaccaa
aggttacctgctggagctgatgttccatatgagtttatctctcttgaatggctgcagaaa
tggctggatgaatccacacctactaaacccatcgataactccaaatgcctttgttctcat
ggcaaactgcaccctgataaaatttcgattatgaagagaatatcagagtttgcagctgat
actttctacagcagatatggaggtggtcccagactaaatgctgaagcactttgtaaagaa
tgtgtagtagagcgatgtcgcgtattacgaatgaagaatcagttgaacgaagactataaa
attatttcaaatttggtgaaagttacattacatagtgaaggatattggattggaaaagca
tcattgcggagctggcgtcagttggctttggagcagttagatgatcaagaagatgagata
gaccatactaatggaagaatgaatggtgatatactaaacaaagaggaatctcaagaagat
aggagagatgacaatgaggagttaagcttcaatgaagacattctttgtccacatggtggt
ctatgcatatctgaaaatgaaagaaaaattatttctgaagaggcatggcagagactcaaa
aattactttccaaaggctcctgaattctctgttaatcaagaatcctgctcacagtgcaag
atcttagaaaaagaaggagaggagaatgaagccttaaataagatgatggcaattgaacag
aagacaacacttccaaatctttttcaggacaaaagcagaccttctattactaactggcct
caggaaacaaatatactctatgttgtatcccagttttttgtggaagaatggagaaaattt
gttaggagacctacaaaatgcagtccagtatcatccataggaaacagtgcacttctgtgt
ccacatgagggcctgatgtttgattttgcaactatgaccaaggaagattctaaacttata
gctctaatatggccctcggaatgggagatgatgcaaaaactgtttgttgtggatcgtgca
atcagaattgtcaaaacagaaaagcctgaaagcaatgtggcaaacccagtctatatgtct
gaacctaagctgtgtcctgaatgtagagaagggctacttttccagcagcagagagacatg
cgagaatatacacaggctaccatttatgtacataaggtggttcataataaaaaggtgatg
gagtgtgcctcagagctaaatatgagtagctcagaagcagaagaggaaaaagaagaaccg
aagcctgaaggagaaattgaccctgattttaatcagactaatgatggaagtgtaaagcga
cagaaagtgtccaaccagggttatgcgatctgtcaaaagcaaaatattcggcgaagtact
cggcataggaaagtacgaggagagaaggcactgcttgtttcagctaatcagacattaaag
gagctaaaaatacagattatgcatgcgttttcagttgctccttttgaccagaacttatca
attgatgggaaggtcctaaatgatgacagtgcaacacttggcaccctaggaatcattcca
gaatcggtcattttattaaaggccgatgaacctattgcagattatgcaactatggatgat
gccatgcaagtttgtttgcctgaagaaggatttaaagggacaggtctccttggacattaa
DBGET
integrated database retrieval system