Geotrypetes seraphini (Gaboon caecilian): 117348937
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Entry
117348937 CDS
T09159
Symbol
TNFAIP1
Name
(RefSeq) BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2
KO
K15074
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117348937 (TNFAIP1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117348937 (TNFAIP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB_2
BTB
BTB_3
DUF7367
SHPRH_helical-2nd
Motif
Other DBs
NCBI-GeneID:
117348937
NCBI-ProteinID:
XP_033777515
UniProt:
A0A6P8P9I9
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Position
15:complement(69047662..69066428)
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AA seq
319 aa
AA seq
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MSGDTCLTAMCPTQGAKPQTCPFKGSSLGNKYVRLNVGGSLYYTTVQVLTRLDTMLKAMF
SGRMEVLTDKEGWILIDRCGKHFGSILNYLRDGTIALPKSQQEIKEMMAEAKYYLIQGLV
DMCHAALQDKKESFEPVCSIPIVTSLKEEEKLIESSAKPVVKLLYNRSNNKYSYTSNSDD
NLLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGCKLAEVCCTSIVYATEKKQT
KVEFPEARIYEETLNVLLYETPRIPDNSLLEATSRSRSQASHSEDDEGFELRDRVRRIHV
KRYSTYDDRQLGHHSAFRD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggatacttgcctcacagccatgtgtcctactcagggagccaaaccccagacc
tgtcccttcaaagggagcagtttaggcaataagtatgtgcgtctaaatgtgggtggatct
ttgtactacaccaccgtccaggtgctgacaaggcttgataccatgctgaaagccatgttc
agtggaagaatggaggtgctcacagataaagaaggctggatcctcattgatcgttgtgga
aaacattttgggagcattttgaattatctccgagatggtactattgcactgccaaaaagc
caacaagagattaaagaaatgatggcagaagccaagtattacctcatccagggcctagtt
gatatgtgtcatgcagctttacaggacaagaaggaatcctttgagccagtctgcagcatc
cccattgtaacctctctgaaagaagaggagaaactcattgaatcgtctgccaaacccgtg
gttaagttgctgtataacagaagtaataacaagtattcctataccagcaactcggatgat
aatttgctgaagaacattgaactgtttgataaactctccctgcgttttaatggccgagtg
ctcttcatcaaggatgtgattggcgatgagatctgttgctggtctttctatgggcaaggc
tgtaaactggctgaagtctgctgcacctccatagtgtatgccacagaaaaaaagcaaacc
aaggttgagtttccagaggctcgcatctatgaagaaacgctgaacgtattgctttatgaa
accccccggattcccgataactctttgctggaagccaccagtcgtagccgcagccaagca
tcccacagtgaggatgacgagggctttgaactgcgtgatcgtgtgcgtcggatccatgtg
aaaagatacagcacatatgatgaccgccagcttgggcaccattcagctttcagggactga
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