Geotrypetes seraphini (Gaboon caecilian): 117348993
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Entry
117348993 CDS
T09159
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117348993 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsh02000
]
117348993 (SLC6A4)
Transporters [BR:
gsh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117348993 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
117348993
NCBI-ProteinID:
XP_033777684
UniProt:
A0A6P8PSG3
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Position
15:complement(35354618..35450040)
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AA seq
664 aa
AA seq
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MEKSASNAMKLLASEGEPLDCKDCKENGLLLKNAKASLRLTDESNKVHPSPEEKGEAGCI
SNGYSAVQNPTSCNGSGDGNGVLCPTTMPHATSPSCVANTHLQQQQLIELEERETWSKKM
DFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAVFGGIPLFYMELALGQYHRNG
CISVWRKICPIFKGIGYAICMIALYVAFYYNTIMAWALYYLISSFKAELPWTSCKNPWNT
LNCTNYFYNSSVTWSEHSISPAEEFYTRQVLQVHRSQGLHDLGGISWQLALCLLFIFTVV
YFSIWKGVKTSGKVVWVTATFPYIILFILLIRGATLPGAWRGVLFYLKPDWQKLVATEVW
VDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALVTSTVNCMTSFMSGFVIFTVLGYM
AEMRNEEVSEVAKDTGPSLLFITYAEAIANMPGSTFFAIIFFLMLITLGLDSTFAGLEGV
ITAVLDEFPHIWGRRRELFVLGLITVCYLGALTTLTYGGAYVVKLFEEYATGPAVLTVVL
LEAIAVSWFYGITQFCNDVKEMLGFSPGWYWRICWVAISPLFLLFIICSFMASPPELRLF
EYDYPYWTTILGYSIGTSSFICVPAYMIFRLLSTSGSLKERILKSITPETTTEIPFGGIR
MNAV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcagccagcaatgcaatgaagctcctggcctctgaaggtgagcccctggat
tgtaaggactgtaaagagaatggactgctccttaaaaacgccaaagcctccctgcggtta
accgatgaatctaacaaggtacatccgtccccagaagagaaaggcgaagcaggctgcatc
tccaatggatactccgcagtacagaaccccacttcttgtaatgggagtggagatgggaac
ggggtcttgtgcccaaccactatgccgcacgccaccagcccgtcttgtgtagccaataca
cacctgcagcagcagcaactgatagagctggaagagagggagacatggagcaaaaaaatg
gactttctactctctgtcattggctatgctgtggacctgggtaatgtgtggaggtttccc
tatatctgttaccagaacggaggaggtgcattccttatcccttacaccattatggctgtt
tttggaggtatccccctattctacatggaattagccctgggccagtatcacaggaatgga
tgcatctctgtctggaggaaaatctgtcctatatttaaaggaattggctatgccatctgt
atgatcgccctctatgttgcattttattataacaccatcatggcctgggctctttactac
ctcatctcctccttcaaggctgagctgccctggaccagttgcaaaaacccctggaacaca
ctcaactgtaccaattacttctacaactcgagtgtcacctggtctgagcactccatctcc
ccagccgaggaattttatacacgacaggtgttacaggttcacaggtcccaggggctgcat
gaccttggaggcatcagctggcagctagccctctgcctccttttcatcttcactgttgtg
tactttagcatctggaagggggtcaaaacatctggtaaggtggtgtgggtgactgccacg
ttcccttatatcatactctttatcctgttaatacgaggtgccactctacctggagcctgg
cgaggagtcctcttctacttgaaacctgactggcagaaacttgtggccacagaggtttgg
gtagacgctgctgctcagattttcttctccctgggtccaggtttcggggtcttgctggcc
tttgctagttacaacaaatttcacaacaattgctaccaggatgcactggtgaccagcact
gtgaactgcatgaccagttttatgtccggctttgtcatcttcactgttctgggctacatg
gctgagatgaggaacgaagaggtctccgaggttgccaaagacacagggccgagccttctc
ttcatcacttatgcagaggcaattgccaacatgcccggctctactttctttgccatcatc
ttcttcttgatgctcatcacgttggggctggacagcacattcgcaggtttggagggagtg
ataacagcagtgctggatgaattcccacacatctgggggagacgcagagagttgtttgtg
ctgggcctgattacagtctgttaccttggggccctgacaactctgacgtatggtggtgca
tacgttgtgaagctgtttgaagaatacgccactggacccgctgttttaacagtagtgctc
ttggaagccattgcagtctcctggttctatggcatcactcagttttgtaacgacgtgaag
gaaatgttggggttcagtccaggctggtattggcggatctgctgggtggctatcagcccc
ctcttccttctgtttatcatctgcagttttatggccagtccgccagagttgcgactcttt
gaatatgattatccctattggaccaccattctaggttacagcatcggtacctcatctttc
atctgcgttccagcctacatgatattccggctgctgagcacttcaggatccctgaaagag
cgtattctaaaaagtatcactccagaaaccaccacggaaatcccctttggaggcatccgg
atgaatgcagtttaa
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