Geotrypetes seraphini (Gaboon caecilian): 117349122
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Entry
117349122 CDS
T09159
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117349122 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117349122 (RNF43)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117349122 (RNF43)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117349122 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
DUF4381
Motif
Other DBs
NCBI-GeneID:
117349122
NCBI-ProteinID:
XP_033778051
UniProt:
A0A6P8PRB5
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All DBs
Position
15:complement(65795968..65922004)
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AA seq
907 aa
AA seq
DB search
MSRSLLLTLWPWLLMATLQAGLGHTGLVLAAAVETERAAAQKAIIRVIPLKMDPTGKSNL
TLEGVFARVAEVMPAEGKLLQFHPLSLCNTSEDEHTVRGFITIVKLESPERDPHPCLSLA
NKAKLAGERGAEAILFDITDDEGAFYQLQEAMGLSHPVVLISGRDAELLMEMVNNNQEAQ
VKIEVKEQPKWPEYDVWILLTVVGTVLAIILYAVFRIKCRANQTQDSLQQQTLHAISQLA
TRKYKSHPRSEHGSWKAGHECASSCSSAPVCAVCLEEFTEGQDLRIISCFHEFHKECVDP
WLQQHRTCPLCMYNIIDGESFPQQLISNRSTQNQEAQQRVHLWRHSLGQAHSQQRNTESA
LQFYHQIDPQALTGQPSISYPICCPPEVSSLDFNRIHYMPYRTMSVAQQWGQHTSHPRKI
AVKQSHKLPAWAKPSPSYQTYMHHYEYPCLEVRTSHPARHHVASSEHRGGLRSRQDEGSC
SGGSFGTERSGYLADGPGSDSSSGPFHSSSSDSMQNCTDVSLQGVYGSRSTFRSSLSSDY
DPMIYFGSENQSPEKVAEQPRRGSRPRSLDSVLNSSSLRTEQQTSSHVHYHHHRHHHYRK
SQPYAARGAGQESGPQLPKSSKGAKVGTLKDTVKQGEQRKGKTHYCQHKKEIHILPQSTP
RSGHHPSTEQSLEPLAADVTNSESDTLRFHLSKRGVGQSKQQRKKKSCGTDASMRYSSGH
FDMTEDCSVHIHYGHNPSYCCSSEGHPLMPAPFFLDGRLHGNTPLPCYPGTQVVWKQQVN
SSVLEPPKEGENVSGEQDSHLFPVDRSRRHISETQEHMHVFQHSQFQSQGLEQSGFLRSK
EICCRKSLLQVLSKPLGDTEVHFCPVLMNSYMSSLGPQKAVCEGLREKALLLSFQEKAVI
LYMEQQA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctcgctgctgctcactctctggccctggttgctgatggcgacgctgcaggca
ggactcgggcacacgggcttggtgctggcagcggcagtggagacggagagggcggccgcg
cagaaggcaatcatcagagtcatcccactgaaaatggaccccacggggaagtctaatctg
acgctggagggggtatttgcccgggtggctgaggtgatgccagcggaggggaaactgcta
cagttccacccattgtccctttgtaacaccagtgaggacgaacatactgtccgtggattt
atcaccattgtcaagctggaaagcccagagagagatcctcatccctgcctgtcgctggct
aacaaggcaaaactggcgggggaaagaggagcagaagccattctcttcgacatcacagat
gatgagggagccttttaccagttgcaggaggccatggggctgagccatcccgtggtgctg
atatcggggcgtgatgctgagcttctgatggaaatggtgaacaacaaccaagaggctcag
gtgaagatcgaggtgaaggagcagccaaagtggcctgagtatgatgtctggattcttctc
actgtcgtgggcactgttcttgcaataattctgtacgccgtattccgaatcaaatgcaga
gcgaaccaaacgcaggattctctgcagcaacagactcttcatgccatcagtcagcttgca
acccgcaaatacaagtctcaccctcgatctgagcatggcagctggaaggctgggcacgag
tgtgccagcagttgcagctctgcaccagtctgtgccgtctgcctggaggaattcacagag
ggacaggatttacggataatttcatgttttcatgagtttcataaggagtgtgttgatcct
tggctgcagcaacacaggacctgtcccctctgcatgtataatatcatagatggtgaatcc
ttccctcagcagctgatttcgaatcggagtactcagaaccaggaagcacagcaacgagtc
cacttgtggagacattctttaggccaagctcatagccagcaaagaaatactgagtcagct
ctgcagttctatcaccaaatagatccccaggccttgactggtcagccctccatcagctat
cccatctgctgtccacctgaggtttcttcattggattttaataggattcactatatgcca
tataggacaatgtcagttgctcaacaatggggccagcacacatcccaccctcggaaaata
gcagtaaagcagtcacacaagttgcctgcatgggcaaaaccatcaccctcgtaccaaact
tacatgcatcattatgaatatccttgcctggaagtgaggacttctcatccagccaggcat
catgttgcctcttctgagcatcgtggtgggcttcgcagccgacaggatgaaggtagctgc
tctgggggcagcttcggcacagagcgcagtggttatctggctgatggaccaggcagtgac
tccagctcaggtcccttccatagttcttctagtgactcaatgcagaactgtacagatgtg
agcctccagggtgtatatgggagccgctccacatttcggagttccctcagcagtgattat
gaccctatgatttactttggttctgaaaatcagtctcctgaaaaagttgcagagcagcct
agaaggggaagcagacctcgctctctagattcagtgttgaacagcagcagcttaagaaca
gagcagcagacttccagtcatgtgcactatcatcaccacaggcatcaccactacagaaaa
agtcagccatatgcagccaggggagcagggcaagagtctggtccacaactcccaaagtcc
tccaaaggagctaaggttggaactctcaaggatactgtcaaacaaggagagcagagaaag
ggcaaaactcattactgtcagcacaagaaagagattcatatcctaccccagagtacacct
cgctcagggcaccatcccagtacagagcagagtctggaaccattggcagcagacgttaca
aattcagaaagtgacaccttgcgctttcatctctccaagagaggtgttggtcagagcaag
cagcagcggaagaaaaaaagctgtggcacagatgcctccatgaggtattcttctggacat
tttgacatgaccgaggactgcagtgttcatattcattatgggcacaatcccagctattgc
tgttcatctgagggacaccccctcatgccagcccctttcttcttggatggcaggttgcac
gggaacacccctctcccctgctatccaggaactcaagtggtatggaaacaacaagtgaat
tcctctgtcttggagcccccaaaagagggtgaaaatgtgtcaggggagcaggacagtcac
ctatttccagtggatagatcaagaagacacatatctgaaacacaagagcacatgcatgtc
ttccaacacagtcaatttcaaagtcaaggcctggagcagagcggctttcttcggtcaaag
gaaatctgctgcagaaagtctctcctgcaagtgctttccaaaccactgggcgatactgaa
gttcatttttgtccagttttaatgaattcctacatgagctccttaggtccccagaaggca
gtttgtgagggcctgagggaaaaggccctgcttctgagctttcaagagaaagcagttatt
ttgtacatggagcagcaagcatga
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