Geotrypetes seraphini (Gaboon caecilian): 117349206
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Entry
117349206 CDS
T09159
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03083
Polycomb repressive complex
gsh04980
Cobalamin transport and metabolism
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117349206 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
117349206 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117349206 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsh01009
]
117349206 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117349206 (HCFC1)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117349206 (HCFC1)
Protein phosphatases and associated proteins [BR:
gsh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117349206 (HCFC1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
117349206 (HCFC1)
HMT complexes
COMPASS/SET1 complex
117349206 (HCFC1)
MLL-HCF complex
117349206 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117349206 (HCFC1)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117349206 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
117349206
NCBI-ProteinID:
XP_033778285
UniProt:
A0A6P8NPY4
LinkDB
All DBs
Position
1:458134825..458567717
Genome browser
AA seq
2078 aa
AA seq
DB search
MASPAAAAVVAGGVSPPPLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIV
DELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQAS
RWEWKRLKAKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYIL
ELRPGSGVVAWDIPITYGILPPPRESHTAVVYTEKDNKKSRLVIYGGMSGCRLGDLWTLD
IETLTWNKPNLSGVAPLPRSLHSATTISNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTL
ACLNLDSMTWEQIVMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDL
WYLETEKPPAPARVQLVRANTNSLEVSWGSVPTADTYLLQLQKYDIPTAATAAMSPAINP
VPSVPVNPPKSPAPAAAAPASIQPLTQATGITLLPQAAVPTIPTTAAAAATIQVLPTVPG
SPLSVSAARAQAVPAVLKVTGPQSSVTSPLVTVRPANQIVKAPVAVTSLPPGVRMVVPTQ
TTQGTAIGTSPQMSGMAALAAAAAATQKIQPSSTPTVLSVPAGTTIMKTVAVSPGTTTLP
TTVKVASSPVMVSNPATRMLKTAAAQVGTSVSSAANSQTRPIITVHKSGTVTVAQQAQVV
TTVVGGVTKTITLVKSPISMPGGSALISNLGKMMSVVQSKPVQTSAITGQASTSPVTQII
QTKGPLPAGTILKLVTSADGKPTTIITTTQAGAAAATKPTILGISSVSPNTTKPGTTTII
KTIPMSAIITQASPSGSLEEAGFSSNAAKVAQPLGRFALAGVTSSTGIKSPITIYTTKMV
TSSTGTPAKIITAVPKLAAAHGQQGVTQVVLKGAPGQPGTILRTVPMSGVRLVTPVTVSA
VKPTVTTLVVKGTTGMTTLGTVTGTVSSSLAGPHGTNASLATPITTLGTIATLSSQVINP
TAITVSAAQTTLTAASGLSTPTITMQPVSQPTQVTLITTPSGVETQPVHDLPVSILASPT
TEQPTASVTIADGGQGDQPGTVTLVCSNPPCETHETGTTNTATTTVIANLGSVMQQQQPG
TVQFIYTNPPCNGQEARTILSQQNGTLVRVCSNPPCETHETGTTNTPTVVSALINASQTN
SVQRICSNPPCETHETGTTYTSTTATANMGTGQRMCSNPPCETHETGTTQTPTTATANIG
IQQPGPLQRVCSNPPCETHETGTTQTSTTATANIDSHLPSTTQQVCSNPPCEMHETNTTP
TATTARANIGTRQTQSSQRAATNPPCETHQTNSTSTTMTVSPENSNGHTSIVQQVCSNPP
CETHETNTTNTPSTATSNIGNSTGQQVCANTTPTATTARANIGMGQSNSEQRTGMNPPCE
THQTNSTGTTMTISTGSNMGQPVSMQSTSPPCETHDSTAGIGSSTAQQVCSNPPCETHET
GTTHTATTVMSNMGSNQDQPPTANGQGEQEAPQPESTTPSEAGTEAITVADTSTAEAAST
STVTATATSIPSRAVTMVTQSTPLPGPSVPNISSMTEPSSEAVSPTKQDASTNPEQLEAP
PTSENMQRESESQDVQEPVQQQHTSELVEALGSEQGGEEEAMQSEPDLQSAALEAESSQE
PSSLRQPGVEQLSLPQELMAEGQTATLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAI
QAVLQAAQHAVMAASGEPMDTSDVAQAELGQPTAIPIVLTQQELAALVQQQQQLQEAQHQ
QQQLQLQLQQQQHHLPTEALVPADSLNDPTSESNSLNELASAVTSAVALLPSAATESLAP
SNTFAAPQPVMVVSPAKLQAAATLTEVANGIESTTAKQDPPPQPLKVPVKKENQWFDVGI
MKGNNMVVTHYFLPSEDSAQTDDDSGTVPDYSQLKKLELQPGTAYKFRVAGINACGRGPF
SEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGE
QRASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQV
RWLQESSKDGAAAKPASKRPVSSPELKSAPKKSKSDNQ
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atggcctctccagcggcggctgctgtggtggcaggaggggtctcgccgcccccgctccag
cctcgctggaagcgggtggtgggttggtcaggccccgtgccccggcctcgtcacggccac
cgcgctgtcgccatcaaggaactcatcgtggtcttcggcggggggaacgaaggcatcgtg
gacgagctacatgtctacaacaccgcaaccaaccagtggtttatccctgctgtacgaggg
gacattcctccaggctgtgcggcctatgggtttgtctgtgatggtacacgactcttagtg
tttgggggaatggtggagtatggaaaatacagcaatgatctctatgagctgcaggcgagc
agatgggaatggaaaaggctgaaggccaaagctcccaaaaatggtcctccaccatgtcca
cgccttggacacagcttttctctggttggcaacaagtgctacttgtttggtggactggcc
aatgacagtgaggaccctaagaacaacatccccaggtacctgaacgatttatatattctg
gagctgcgtccgggttctggtgtggtggcatgggatatccccatcacatatggtattcta
ccacctccccgggaatctcatactgcagtagtgtacactgaaaaggacaacaagaaatct
cgactggtaatctatggtggcatgagtggctgccggctgggggatctttggactcttgat
attgagacactgacatggaacaagcctaacttgagtggcgtggcacccctccctcgcagc
ttgcactctgccactactatcagtaacaagatgtatgttttcggaggatgggtgccactc
gtcatggatgatgtgaaggtagcaacccatgaaaaggaatggaagtgcaccaacacacta
gcctgtctcaacctggactccatgacttgggagcagattgttatggacacactggaggac
aacatacctcgtgcccgtgctggtcattgtgctgtagccattaacacacgcctctatatt
tggagtggtcgtgatggctaccgcaaggcttggaacaaccaagtgtgctgcaaggatctc
tggtacttagaaacagaaaagcccccagcccctgctcgggtccagctggtgagagccaac
accaactctctagaagtgagctgggggtctgtgcctactgcagatacctatttgctgcag
ctccagaagtatgacatccccactgctgcaacggctgccatgtcccctgccatcaaccca
gtgccatctgtgcctgtcaacccacccaaaagccctgccccagcagctgctgcccccgct
tccatccagcctctgacacaagcaacaggaattacacttctcccacaggcggcagtccct
acaatacccaccacagctgctgctgcagccaccatccaggttttgcctacagtgccagga
agcccattatctgtatctgcagccagggcacaagctgtgccagcagtcttgaaggtcaca
ggaccccagtctagtgtcacctccccccttgtcaccgtccgtccggctaaccagattgtc
aaggctcctgttgctgtgacttctctgcctcctggagtaagaatggttgtacccacacag
actacacaaggaactgctattggcaccagcccgcagatgagtggcatggcggcattggct
gcagctgcagctgccacccagaagatccaaccttcttccacacccactgtgctaagtgtc
cctgctggcaccaccattatgaaaacagttgctgtgtcaccagggaccaccacgctgcct
accacagttaaggtggcatcctccccagtaatggtgagcaatcctgctactcggatgctg
aaaactgcagctgctcaggttggcacctctgtgtcctctgctgccaatagccagacacga
cctattatcactgtccacaaatcgggcacagtgacagtagcccagcaggctcaggttgtc
accactgtagtgggaggagtcaccaaaaccattaccctggttaagagccccatatccatg
ccaggaggcagtgccctgatttctaacctgggaaagatgatgtctgttgtccaaagcaaa
ccagttcagacctctgccatcacagggcaagcatccactagccctgtcacgcagattatt
cagaccaagggacccctccctgctgggactatactgaaactggtaacttcggctgatggc
aagccaaccaccatcatcaccactacacaggctggggctgctgctgcaaccaaacccacc
atcttaggtatcagcagtgtatcacctaacaccactaagccgggtaccaccacaatcatc
aaaaccatccccatgtctgccatcatcactcaagcaagcccttcaggtagcttggaagaa
gcgggcttttcgtcaaacgctgcaaaggttgctcaacctctcgggaggttcgcactagca
ggagtaacaagcagtactggaattaagtctcccatcaccatctataccaccaaaatggtg
acctccagcacaggcactccagccaagatcataactgcagtaccaaaacttgcagcagct
catgggcagcaaggggtaacacaggtggtattaaagggggcaccagggcagcctggcacc
atcctgcgaacagttcccatgagtggggtccgcctggtcactccagtgactgtgtctgct
gtcaaaccaactgttaccactctggtggtgaaaggaaccacaggcatgaccacccttggc
actgtgactggtacagtctcttccagcctggctggaccacatggcactaatgcttcattg
gctactcccatcaccacccttggcaccattgcgacgctctcaagccaagtgatcaaccca
actgccatcacggtgtcagctgcacaaaccaccctgacggctgctagcggcttaagtaca
cccaccatcactatgcagcctgtctcacaacccacacaggtcacactgatcactacaccc
agtggtgtggagacgcagcctgtccatgatctccctgtctcaatcttggcctctcccacc
acagaacagcctacagcttctgtaaccatcgcagatggagggcagggtgaccagcctggc
acagtcaccttagtgtgttccaacccgccttgtgagacacacgagactggtaccacgaac
actgccaccaccactgtcattgcaaacttgggcagtgtgatgcagcaacaacagccagga
acagttcagttcatttacacaaatccaccctgcaatgggcaggaagccagaacaattctc
agccagcagaatggcactttggtgcgggtatgctccaatcccccttgtgagacacatgag
actggcactactaacacacctactgtggtcagtgctttgattaatgctagtcagactaac
tctgtgcagagaatctgctcaaatccaccctgtgagactcatgaaacggggaccacgtac
acctcaaccactgccacagccaacatgggcacaggacagagaatgtgctcaaatcctcca
tgtgaaacccatgagacagggaccacccagacacctactacagccacagccaacattgga
atacaacagcctggcccattacagagagtgtgttcaaatcctccatgtgaaactcatgaa
acaggtaccacgcagacatctaccacagccacagccaacattgacagtcatttgcctagt
acaacacaacaagtgtgttcaaaccctccctgtgaaatgcatgagacaaacaccaccccc
acagctaccaccgccagagcaaacattggcacaaggcagactcaaagcagtcagagagct
gccacaaatccaccctgtgaaacacatcaaacgaactcaacaagtaccaccatgacagtg
agcccagagaacagcaatggtcacacaagcatagtacaacaagtttgctcaaaccctcca
tgtgagacacatgagaccaacaccaccaatacacccagcactgcaacatccaacattggt
aacagcacagggcaacaggtatgtgccaacaccactcccactgctaccactgccagagca
aatattggtatggggcagtccaacagtgagcagagaactggtatgaatccaccctgtgaa
acacatcagacaaattcaactggtactactatgactataagcacggggagcaatatgggt
caacctgtaagcatgcagtcaacaagccctccttgtgagacccatgattccacggctggc
atcggaagtagcacagcacagcaggtgtgctccaacccaccctgcgaaacgcatgaaact
ggaactacccacactgccaccactgtgatgtctaacatgggctccaatcaagaccagcca
cccacagccaatggccagggagagcaggaggcaccacagccagaaagcaccactcccagt
gaagctgggacagaggccatcacagttgccgatacctccactgcagaagcagcatcaacg
tccactgttacagcaactgcaacatcaatcccaagcagagcggtgactatggtgacgcaa
tccacaccattgccaggaccttctgtaccaaacatatcttccatgacagagccctcgtct
gaagcagtatcacctactaaacaggatgccagtactaacccagagcagttggaagcccca
cccacttcagagaacatgcagagagagtcagaatctcaagatgtccaggagccagtgcag
caacagcacacatcagagcttgtggaggcactaggatcagaacaagggggagaggaggag
gctatgcaaagtgagccagatctccaatcagcggcactggaagcagagtcaagccaggag
ccctcatcactgaggcagccaggagtagagcagctatctctgccacaagaattgatggct
gagggacagacagctacattaatggtgacaggcctgacaccagaggaattagcagtcact
gcagcagctgaagcagcagcacaggcggcagccacagaggaggctcaagctttagccatc
caggctgtgctccaggcggcccagcatgctgtgatggcagctagcggagagcccatggac
acttcagatgtggctcaagcagaactggggcagcccacggccattcccattgtcctgact
cagcaggaactggcagccctggtgcagcaacagcagcagcttcaggaggcacagcatcag
cagcaacaacttcagcttcagctccagcaacaacagcatcacttgcctacagaagcccta
gtacctgctgacagtctcaatgacccaaccagtgagagcaatagcttgaatgagctggcc
agtgctgtcaccagtgctgtggcgctgctgccatctgcagccactgagagtctggctcca
tccaatacttttgcggctccacagcctgtgatggttgtcagccctgccaaattgcaggct
gcagcaaccctcactgaagttgccaatggaattgaatctaccaccgcaaaacaggacccc
cctccacagccgttgaaggtgccagtgaagaaggagaaccagtggtttgatgtgggtata
atgaaaggcaacaatatggtggtgacgcactactttctgccctcagaggattctgcccaa
acagatgatgactctgggactgtccctgactatagtcagctgaagaagctggagctgcaa
ccaggcactgcctacaaattccgtgtggcagggatcaatgcttgtggccgagggcccttc
agtgaaatttcggccttcaaaacttgcctgccaggtttcccaggagctccttgtgccatc
aaaattagcaaaagccctgatggtgctcaccttacatgggaacctccctccgtcacttct
ggcaaaattatcgaatactcagtatacctagccatccagagtagccaggcaggtggcgag
cagcgggcctctactccagctcaactggcctttatgcgagtctattgtgggcccaaccct
tcctgcctggtgcaatcctctagcctttccaatgctcacatcgactacactaccaaacct
gccatcatcttccgcatagctgctcgcaatgagaagggttatggtccagccacccaagtc
cggtggctacaagaatccagcaaagatggagcagcagccaagcctgccagcaaacgtcct
gtgtcctcacctgaactgaaatctgctccaaagaagtccaaatctgacaaccagtga
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integrated database retrieval system
