Geotrypetes seraphini (Gaboon caecilian): 117349325
Help
Entry
117349325 CDS
T09159
Symbol
SUPT4H1
Name
(RefSeq) transcription elongation factor SPT4 isoform X1
KO
K15171
transcription elongation factor SPT4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117349325 (SUPT4H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117349325 (SUPT4H1)
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117349325 (SUPT4H1)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117349325 (SUPT4H1)
RNA polymerase I system
117349325 (SUPT4H1)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
117349325 (SUPT4H1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
117349325
NCBI-ProteinID:
XP_033778523
UniProt:
A0A6P8PUS7
LinkDB
All DBs
Position
15:complement(65772928..65786967)
Genome browser
AA seq
137 aa
AA seq
DB search
MVRPHAQEAVLCACAARAGKMALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYL
QMKGNRDMVYDCTSSSFDGIIAMMSSEDSWVSKWQRIGNFKPGVYAVSVTGRLPQGIIRE
LKSRGVVYKSRDTAIKT
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atggtccgccctcacgcgcaggaagcagtcttatgcgcatgcgctgctcgcgctggcaag
atggcgttggagacggtcccgaaagatctgaggcatttgcgggcttgtctgctctgttcc
ctcgtcaagaccattgaccagtttgaatatgacggctgtgataactgtgatgcctactta
cagatgaaggggaacagagacatggtttatgactgtactagttcttcatttgatgggatc
attgccatgatgagttctgaggacagctgggtgtctaagtggcagcgaatcggtaatttc
aaaccaggtgtgtatgccgtgtctgtcacaggacgtcttccacaagggataatacgagag
ttgaagagccgaggtgtggtatacaagtccagagacacagcgataaagacctga
DBGET
integrated database retrieval system
