Geotrypetes seraphini (Gaboon caecilian): 117349386
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Entry
117349386 CDS
T09159
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117349386 (SUPT6H)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117349386 (SUPT6H)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117349386 (SUPT6H)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117349386 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
oligo_HPY
Motif
Other DBs
NCBI-GeneID:
117349386
NCBI-ProteinID:
XP_033778696
UniProt:
A0A6P8PTG0
LinkDB
All DBs
Position
15:31669908..31865713
Genome browser
AA seq
1744 aa
AA seq
DB search
MSDFVESEAEESEEEYIEEGDDGPRVSKKFVEDDDEEEEEENLDDQDEQGNLKGFINDDD
EEEEEEEEEEEEGGSDSEGSKDEVGHRRKKRTFDDRLEDDDFDLIEENLGVKVKRQKKFR
RVRKMSEDEDEEEEDYGKEEHEKEAIAEEIFQGGEGEEGPEPVEAIMIAPDEEEEEDEEE
SDIDDFIVDDDGQPLKKPKWRKKFPGFVDAALQEAQEIFGVDYDYSEFEKYNEDDEEMEE
EYEYEDEETEGETRVRPKKTTKKRVSRRSIFEIYEPSELESSHLTDQDNEIRMTDLPERF
QLRTIPVKSAEDDELEEESDWIYRNAFATPTISQQESCDYLERSQTGSNFNRKGPSTIQK
IKEALNFMRNQHFEVPFIAFYRKEYVEPELNINDLWRVWQWDEKWTQLRIRKQNLMRLFQ
KMQAYQYEQISADPDKPLADGIRPLDTTDMERLKDVQFMDELKDVYNHFLLYYGRDIPKM
QNAAKSSRKKQKRIREEGEEEEGEGEAEEQDDEEQKGPELKQASRRDMYTICQNAGLDGL
AKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFNTAEAVLEGARYMVALQ
IAREPLVRTVLRQTFQERAKLNVLPTKKGKKDVDEAHYAYSFKYLKNKPVKELRDDQFLK
MCLAEEEGLLTIEICIDMKGVESYGSDQSYFEEIKQFYYRDEFSHQVQEWNRQRTMAIER
ALKQFLYPQMGKELKNKLLVEAKEFVIKCCSRKLYNWLKVSPYRPDQQVEEDDDFMEESQ
GKGIRVLGMAFSSARDHPVFCALVNGEGEVTDFLRLPYFTKRRNAWREEERERKTRDMES
LKKFLLSKKPHVVAIAGENRDAQMMMEDVKRIVHELDQGQQMSSIGVEVVDNELSLLYMN
SKKSETDFRDYPPVLRQAVSLARRIQDPLIEFSQVCSTDDDILCLKLHPLQEHIVKEELL
SSLYCEFINRVNEVGVDVNRAIAHPYTQALIQYVCGLGPRKGTHLLKILKQNNTRLENRT
QLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALE
YDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYK
DLRTPYRSANTEEVFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDESGL
WQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEE
RVKVGMTVHCRIMKIDIEKFGVDMTCRTSDLMDKNNEWKLPKDTYYDFDAEAADQKLEED
WKKKQQRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVND
GIYQHVDVREEGKENAFSLGSTLWISNEEFEDLDEIIARYVQPMASFARDLLSHKYYQDS
NSGERKKLEELLIKTKKEKPTFIPYYISACKDLPGKFLLGYQPRTKPRIEYVTVTPEGFR
YRSQIFPTINGLFRWFKDHYQDPVPGITPSSSSSRTRTPGSTNATPANINLADLTRAVNA
LPQNMTSQMFNAIAAVAGQGQNPNSTPAQWASSQYGYGGGSGGGSSAYHVFTTPAQQPVA
TPLMTPSYSFTTPNQPITTPQYHQLQSSGTPTPTPTPTATPTPTPQSSQSQPSSSSRQRQ
QPKSNMHAAIDWGKMAEQWLQEKEAERRKQKQRLTPRPSPSPMIDSTPMSVAGDATPLLD
EMDR
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactttgtggagagcgaggctgaggagtcagaggaagagtatattgaggaagga
gatgatggtcccagagtcagcaagaagtttgtggaagatgatgatgaagaggaagaagag
gaaaaccttgatgatcaggatgaacaggggaatctgaagggattcattaatgatgatgat
gaagaagaagaggaggaggaagaagaggaggaagaaggaggtagtgattcagaaggctcc
aaggatgaagttggtcacagaaggaaaaagcgaacctttgatgatcgattagaagatgat
gattttgaccttattgaggagaacctgggtgtcaaagtaaagagacaaaaaaaattcaga
cgtgtacggaaaatgtcagaagatgaggatgaagaagaggaggattacggaaaggaagaa
catgagaaggaagcaattgctgaggagatctttcagggtggggagggtgaagagggacca
gagcctgtggaagccatcatgattgccccagatgaagaagaggaggaggacgaggaggaa
tcagatattgatgacttcattgtggacgatgatggacagcctttaaagaagcccaaatgg
aggaagaaattcccaggatttgtagatgctgctctgcaagaggcccaggagatctttggt
gtagactatgactatagtgaatttgagaaatacaatgaggatgatgaggagatggaggaa
gagtatgaatatgaggatgaagagactgaaggggagacaagagtccgacccaagaagacc
accaagaagcgtgtcagccggcgcagtatttttgagatatatgagcccagtgagctggag
agcagccacctcacagatcaggacaatgagattcgaatgacagatctgcctgaacggttc
cagctgcgtactattcctgtgaaaagtgctgaagatgacgagttagaagaagaatctgac
tggatctacagaaatgcatttgcaactccaaccatttctcaacaggaaagttgtgactat
ttagaacgtagtcaaactggcagcaatttcaacaggaagggacctagcactatacagaag
attaaagaagccctcaactttatgagaaatcagcattttgaggtccccttcattgccttc
tacaggaaggagtatgtggaaccagagctgaatataaatgatctgtggcgtgtctggcaa
tgggatgagaagtggacccagctgcggattcgtaaacagaatttgatgcgtctgtttcag
aagatgcaagcttatcaatatgagcaaatctctgctgatccagacaaaccactggcagat
gggattcggccccttgataccacagacatggagaggctgaaagatgtgcaattcatggat
gaactgaaggatgtgtacaaccacttcctgctgtattatggccgagacattcccaagatg
caaaatgctgccaagagtagtcgcaagaagcagaaacgcattcgtgaggagggagaggaa
gaggaaggagaaggagaagctgaggagcaggatgatgaagaacagaagggaccggaactg
aagcaggcatctcgcagggacatgtatactatctgtcaaaatgctggcttagatggccta
gccaagaagtttgggctgacccctgagcagtttggagagaacctccgagacagttaccaa
cggcatgagacagagcaatttcctgcagaacccctggagctggcaaaagactatgtgtgc
agtcagtttaataccgctgaggcagtgctggaaggagcccgatacatggttgctctgcag
atagctcgggagccactggtcaggacggttcttagacagaccttccaagaaagggctaaa
ctcaatgtattgccaaccaagaaaggcaaaaaggatgtagatgaagctcattatgcctat
tcctttaaatacctgaagaataagccagtgaaagagttgagagatgaccagtttctgaag
atgtgtctggcagaagaggagggactattaaccattgagatttgcattgatatgaaaggt
gtggagagctatggcagcgatcagagctactttgaggagatcaagcagttttattaccgg
gacgagttcagtcaccaggtgcaggaatggaaccggcagcgtaccatggccattgaacga
gcactcaagcagtttctgtacccacagatgggcaaagagctcaagaacaaactgcttgtc
gaagccaaggaatttgtcatcaagtgctgcagtcgtaaactctacaactggctgaaggtg
tcaccataccgcccagatcagcaggtagaggaagatgatgattttatggaggaaagccag
gggaaaggcatcagagttctgggaatggccttctcctctgctagggaccatcctgtattc
tgtgctttggtgaatggtgaaggggaggttacagattttctccgcttaccatactttacc
aagagaaggaatgcctggagagaggaggagcgggagcggaagacccgtgacatggagtcc
ctgaagaaatttctcctgagtaagaaacctcatgtggtggcaattgctggagagaacagg
gatgctcagatgatgatggaagatgtgaagcgcattgtgcatgagctggatcagggacaa
caaatgtcatctattggggtggaggtggtagacaatgaactttctctcttatacatgaac
agcaagaaatctgagaccgattttcgggattaccctcctgtgctgcggcaggctgtctcc
cttgcccgtcgcatccaagaccctctgatcgagttctcccaggtgtgcagcactgatgac
gacatcttgtgcctgaaacttcatcctctgcaggagcatatcgtgaaagaagaactgctg
agctccttgtattgtgagtttataaatcgtgtaaatgaagtgggagtggatgtcaatcga
gcgattgctcatccttacacacaggctcttatccagtatgtttgtggcttgggaccacgg
aagggcactcatttattgaagatcttgaaacagaataatactaggctggagaatcgaacc
cagttggtcaccatgtgtcacatggggcccaaagtcttcatcaactgtgctggctttatc
aagattgataccgcctcactgggagacagcaccgattcctacattgaagtgctggatggc
tccagggtacaccccgagacttatgagtgggcacgaaagatggcagttgatgcactagag
tatgatgaatcagcagaagatgccaaccctgcaggagccctggaggagatcctagagaac
ccagaacggttgaaggacctggatctagatgcctttgctgaggagctagagaggcagggc
tatggtgacaagcatatcactttatatgacatccgggcagagctgagttgcaggtacaag
gacctgaggacaccttaccgctctgctaacactgaagaggtcttcaatatgctgaccaag
gaaacccctgagacattctacataggtaaacttattatctgtaacgtgacaggcattgca
caccggcggcctcagggtgagagctatgatcaggccatcaggaatgacgagagtggtctg
tggcagtgtccattctgtcagcaggataacttcccagagctcagtgaggtatggaatcac
tttgacagcggctcgtgccctggtcaggcaataggtgttaaaaccaggctggataacgga
gtcacaggcttcatacctacaaagtttcttagcgacaaagtagtcaagcgcccagaagaa
agagtcaaggtgggaatgactgtccactgccggattatgaagatcgatatagaaaagttt
ggtgtggatatgacttgccggacttctgacctaatggataaaaataatgagtggaaatta
cctaaagatacatattatgactttgatgctgaagcagctgatcagaaactggaagaggat
tggaagaagaaacaacaacgaacaacatatatcaagagagtgatcgctcatccctcattc
cacaacattaatttcaagcaagctgagaaaatgatggaaaccatggatcaaggagatgtg
atcatcagacccagtagcaagggagagaatcatctgactgtcacttggaaagtgaatgat
ggcatctaccagcatgtggatgtgcgtgaggagggaaaagaaaatgctttcagcttgggt
tccaccttgtggatcagtaatgaggagtttgaggatctggatgaaataattgctcgctat
gttcagccaatggcatcctttgcccgagacctgctgagtcacaagtactaccaggacagc
aacagtggagaaagaaagaaactggaagaacttctaataaaaactaaaaaggagaagcca
acctttattccttattatatctctgcttgtaaagacctccctgggaaattcctgctagga
taccagcctcgaaccaaaccaaggatcgagtatgtgacggtaacaccagagggattccga
tacagaagtcagatcttccccacaataaatgggttattccgatggtttaaggaccattac
caggaccctgtaccaggtataactccaagcagcagcagcagcagaactcgaaccccaggt
tcaacgaatgctacccctgccaatattaacctagcagaccttactcgtgccgtaaatgca
cttcctcagaacatgacatcgcagatgttcaatgccattgctgcagtagctggacaaggg
cagaatcccaactccacaccagcgcagtgggcatccagccagtatggctacggaggtggc
agtgggggcggaagcagtgcttaccatgtcttcacaacgccagcacagcaaccagtggca
acccctctgatgacccccagctattctttcaccacacccaatcaaccaatcacaaccccc
caatatcatcaattacagtctagtggcacacctacacccacacctacacccacagctaca
cctacacccacacctcagtcctcacagtcacaaccatcgtccagttccaggcaaagacag
caaccaaagtccaacatgcatgctgccatcgactggggcaaaatggcagagcagtggctg
caagagaaggaagcagaaagacggaagcagaagcagcggctgaccccacgtccctcaccc
agccccatgatcgacagcacgccaatgtctgttgctggcgatgccacaccattgctggat
gagatggaccgatag
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integrated database retrieval system
