Geotrypetes seraphini (Gaboon caecilian): 117349395
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Entry
117349395 CDS
T09159
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117349395 (MED13)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117349395 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
117349395
NCBI-ProteinID:
XP_033778712
UniProt:
A0A6P8NR02
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Position
15:44311652..44743884
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AA seq
2172 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGSTSAPILFPVTEEDPILSSFSCC
LKADVLSVWQRDQRPGRRELWIFWWGEDPNFSDLIHHDLIEEEDGMWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHLNLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLISEWKQFY
PISSGMKEGLEEKLEEMDWEDDSLAAVEVLVAGVRMVYPACLILVPQSDIPSPSNVGSSH
CSATNLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWAKFSNVSDGLSSDST
SHHGGKIPRKLANQVVDKVWQECTMNRSQNKRKYSATSNDEKMAEKIASWDFVEATQRTN
CNCSRHKNLKQRNIGQQGQTMPVGQQQQAAPKHKTAEKQEKGDKPQKRPLTPFHHRASVS
DDIAIETDSANQRLAIRSQDSRGRFSNIRHSDVAKTPQIHCPEMTNSPLPPPLSPHPCDG
VDEGGDAIKNPSTPQSQHFYQMPTPDPLIPTKAVDDRIDSLNQSFPPSFPDVLEPTLYVG
AAVNVDEEETDAAWKYYKVPKRKDLEFLPPQLPNDKFRDDPIGSVGLENVTSITELMAQY
KKPLKVSDLVVQKYQSKNQYLAATGLDTDQKPEIDPYAFVDGDVEFVFSDKKERQNSEKE
TYKKHKVEDRISNVTVLPHEGEDAMSLFSPSIKQDGQRTATHTRTASTSLIHENDLVVSY
TDLDNLFNSDEDELTPGSKKTLISDEKSSCKESKTGNLDPLSCISTADLHKMYPTPPSLE
QHIMGFSPMNMNNKEYGILDSMPGGTLLEGNNFSIGAQFKIEVDEGFCSPKPSEIKDFSY
VYRPENYQALVGCSMFAPLKIIPSQCLPPVKLPEECIYRPSWTVGKLELLPPGLSMPFIK
DGNIPSVGSAMDQEYGQTYTPQTHTPFGMSNSAPPSNSGPGILPSPATPRFSAPTPRTPR
TPRTPRGAGGPASVQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLI
LSESVINLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGN
NSGLFLEDELDIVGRNTECGKEVEKRFEALRAVYVDHNSGGMKEPEKLPDELILLLQDQC
TNLFSPFGAIDQDSIYKTGAISNSVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALV
KSTCLHNWSKKNVVDLSMQCSQDILRMLLSLQPILQDAIQKKRTVRSWGVQGPLTWQQFH
KMAGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDIAYVVV
CPENEALLNAAKSFFRDLTAIYESCRLGQHRPISRLLSDGIMKVGSSAAKKLVDKSVSDW
FSQAANGNSEAFSKLRLYAQVCRYDLGPYLASQPLDSSLLGQPNLASPVNQPTANQPSAA
GSTGNANTPSISAAVTSGSIANSSISSTITSSTSTTTTTSNIGSGIATSKPSSFPPFASI
NSTSAGCMPTQINTAQNGQGGQMQQPTHQPSGTSGEVGVGSIPGQQHSEVSESTMDRDKV
GIPTDGDSHAVTYPPAIVIYIVDPFSYENKDEGINSSSIWTLGLLRCFLEMVQSLPSSIR
NTLSVQIVPCQYLLQPVKNEDRQIYTQHLKSLAFSAFTQCRRPLPVSTNVKTLTGFGPGL
AIETALKSPERAECIRLYSPPFILAPVKDKQTELGETFGEASQKYNVLFVCYCLSHDQRW
LLASCTDLYGELLETCIINIDVPNRARRKKGSARRCGLQKLWEWCLGLVQMSSLPWRVVI
GRLGRIGHGELKDWSCLLSRRNLQTLSKRLKDVCRMCGISAADSPSILSACLVAMEPQGS
FVVMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENID
LAFNANNDGADEMGIFDLLDTGEEIDPDITNILSASPTGFPVHSPGSHYPHGGDAGKGQG
TDRLLSTESHDEVTNILQQPLALGYFVSTAKVGPLPDWFWSACPQAQNQCPLFLKASLHL
HVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVV
LTQLYNFIMNML
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatgtttcgtaccgaacggggccagtctggaggattgccattccaatcttttt
tgtctggctgatttaactggaattaaatggaagcggtatgtatggcagggttcaacgtct
gctcccattctctttcctgtgacggaagaggatcccatcctaagcagtttcagttgctgt
ttgaaggcagatgtgctgagtgtttggcagcgagaccagagacctgggcgcagggagctg
tggatattttggtggggagaggaccccaacttttctgatcttattcatcatgatttgata
gaggaggaagatggaatgtgggaaaatggactttcctatgaatgtcgaactctgctcttc
aaggcagttcacaatctactggagagatgtttaatgaaccgcaactttgtgcgtatcggc
aagtggtttgtgaaaccctatgaaaaagacgagaaacccattaataaaagtgagcacttg
tcctgttctttcacctttttcctgcacggtgacagcaatgtttgtactagtgtggaaatt
aaccagcaccaacctgtgtatcttctcagtgaggaacatctcaaccttgcccagcagtct
aacagtccttttcaagttattttaagcccatttgggttaaatggcactctaacaggtcag
tccttcaagttgtctgattcatccaccaagaaattaattagtgagtggaaacagttttat
cctatctcatctggcatgaaagaaggtttggaggaaaagctggaggagatggactgggaa
gatgactctctggctgcagtggaagtccttgttgctggagtgcgaatggtctatccagca
tgcttgattttagttcctcagtctgacatcccttctcctagcaatgttggaagttctcac
tgttctgctaccaacctgggggtccaccaagtgcctgcttctacaagagatcctgccatg
tcttcagtaacactaactccaccaacatccccagaagaagttcaaacagtggatgctcag
tcagctcagaagtgggcgaagttctctaatgtttctgatggattgagttctgacagcact
agccaccatggagggaaaatccctaggaaattagccaatcaggtggtggataaggtgtgg
caagaatgcaccatgaacagatcacagaacaagagaaagtattctgctacttcaaatgat
gaaaagatggctgaaaaaattgcatcctgggattttgttgaagctacacagagaacaaac
tgtaattgttccagacataaaaatcttaaacagagaaatataggtcaacaggggcagaca
atgccggtgggccagcagcagcaggcagctccaaagcacaagacagcagagaagcaagag
aaaggggataagccacagaaacgccctctgactccttttcaccatcgtgcatctgttagt
gatgatattgccatagaaactgactcagctaatcaaagacttgcgatcagatcacaggac
agcaggggtcgtttctcaaacatcagacatagtgatgtagcaaagactcctcagattcat
tgccctgaaatgacaaattcaccactgccaccaccacttagtcctcatccatgtgatgga
gtagatgaaggtggagatgctattaaaaacccttcgactcctcagagccagcatttctat
caaatgccaactccagatcccttgattcctactaaggcagtagatgacaggatagatagc
ttaaaccaatcctttccaccttcatttcctgacgtcctggagcctacactctatgttggt
gcagcagtaaacgtggatgaggaagaaacagatgctgcatggaagtattataaggttcct
aagagaaaagatttggaattcttgcctccacagcttccaaatgataaattccgagatgat
ccaatagggtctgttgggctggaaaatgttacatctattacagagttgatggcgcaatat
aagaaacctttaaaggtttctgatcttgttgtccagaagtatcaaagtaaaaaccagtat
ctggcagcaacaggattggatactgatcagaaacctgaaattgatccctatgcttttgtt
gatggagatgtggaatttgttttttctgataagaaagagaggcagaacagtgaaaaagaa
acttataaaaaacacaaagtagaggatagaatatcaaatgtaactgttctgcctcatgaa
ggagaagatgctatgtccttgtttagtccctctatcaagcaagatggccaacgcacagct
actcacacccgcactgcatcaaccagccttattcatgaaaatgacctggtggtatcttat
acggaccttgataatctcttcaattctgatgaagatgaacttacacctggatctaaaaaa
actctgatctcggatgaaaaatccagttgcaaagaatcaaaaactggaaatctggaccct
ctatcatgcataagtactgcagatctccacaagatgtatccaacccctccatcactggag
cagcacattatggggttctctcctatgaatatgaacaacaaggagtatggcatcttggac
agcatgcctggaggaacgttactagaaggaaataatttcagtataggtgctcagtttaaa
attgaggtggatgagggattctgcagtccaaaaccttctgaaataaaggatttttcatac
gtgtatagacctgagaattatcaggctttagtgggatgctctatgtttgctcctctgaag
atcatccccagccagtgtctacctcctgtcaaattacctgaggagtgcatttaccgccca
agttggactgttggaaaactggagttacttccaccaggcctctccatgccattcatcaaa
gatgggaacattcctagtgttggaagtgcaatggatcaggaatatggccagacctacaca
ccacaaactcatacgccatttggaatgtccaacagtgctcctcccagtaacagtggacca
ggaattctcccatctcctgccacccctcgcttttctgctcctacaccccgaaccccaagg
actccacgtaccccacgtggtgcaggtggccctgccagcgttcaaggttcagttaaatat
gagaattcagatctatattcacctgcctccacaccctcaacctgcagaccactcaattct
gttgaacctgctactgttccttctatcccagaagcacacagtctttatgtcaatctcatt
ctctccgagtctgtaataaacctattcaaagattgtaattttgatagctgttgcatttgt
gtttgcaacatgaacatcaaaggggccgatgttggagtttacattccggatccaacacaa
gaggctcagtacaggtgtacgtgtggcttcagtgctgtcatgaacagaaagtttggcaac
aattctggactcttcctggaagatgagttagatatagtgggacgtaatacggagtgtggc
aaagaagtagaaaaacgttttgaagccctcagggctgtttatgttgatcataacagtgga
gggatgaaagaacctgagaaattacctgatgagttgatcctgctccttcaagatcagtgc
actaatttattttctccgtttggagctatagatcaagattccatatataaaactggtgct
attagtaactcagttcgtgtggaagaacgagactgttgtaatgactgctatctagcatta
gaacatgggcgccagtttatggacaatatgtcggggggcaaagttgatgaagcccttgtg
aaaagcacttgcctacataattggtcaaaaaaaaatgttgtggacttgagcatgcagtgt
tcccaggatattcttcgtatgcttctgtccttgcagcccattttgcaggatgcaattcag
aaaaaacgtacagtcagatcttggggtgtgcagggtcccctcacatggcaacagtttcat
aaaatggctggtcgaggcagctatggaacagatgagtccccagagccactgccaattccc
acatttttgctgggatatgattatgactttctggtgctctcgccttttgccttgccttac
tgggaaaggcttatgctggaaccctatggatcacaacgagacattgcttatgtggtggtg
tgtcctgagaatgaggccctgctgaatgcagcaaaaagcttcttcagggacctcactgca
atttatgagtcctgtagacttggccaacacagacctatttccaggctgctttctgacggg
atcatgaaggttggatctagtgctgcaaagaaacttgttgataagtcagtctctgattgg
ttctcccaggcagccaatggcaacagtgaagcattctctaaactccgactctatgcacaa
gtttgcagatatgatcttggtccttaccttgcctctcagcctttggatagttctttactt
ggccagccaaatcttgcttcccctgttaaccagccaactgccaaccaaccttcagcagca
ggtagcactgggaatgcaaatactccatctatctctgcagctgtcactagtggctccata
gcaaacagttccatctcttctacaattacttcaagcacttcaaccaccaccaccacctca
aacattggcagtggaatagcaacaagcaagccttcctcatttccaccttttgccagcata
aatagtacctctgctggctgcatgcctacacagattaacactgctcagaatggacaaggg
ggccaaatgcagcagccaactcatcaaccatcgggaacatctggagaagttggagtggga
tccatacctggacaacagcattcagaagtttctgaaagtacaatggatcgggataaagtt
ggaatacctactgatggtgattcccatgctgtcacttacccacctgcaattgtaatttat
attgttgatcccttttcttatgaaaataaagatgaaggcataaactcatccagcatatgg
actcttgggctgcttcgatgctttctggagatggtacagagtcttccatccagtattagg
aacacactgtctgtgcagattgtgccatgccagtatttgttacagcctgtaaagaatgag
gatcggcagatttatactcagcatttaaagtctttggcattttcagcatttacccagtgt
cgaagacccctgccagtttcaaccaatgtaaaaactttgactggttttggtccaggttta
gccattgaaactgctcttaagagtccagagagagcagaatgcattcgactgtactcgcct
ccatttatacttgcccctgttaaggataaacagacagaacttggggagacatttggggaa
gcaagtcaaaaatacaatgtgctctttgtgtgttattgcttatctcatgatcaaagatgg
cttctggcatcttgcacagatctctatggagaacttttagaaacttgcatcattaatatt
gatgtaccaaacagagctcgcaggaaaaaaggctctgctcgccgctgtggccttcagaag
ctctgggagtggtgcttaggacttgtacaaatgagttcgctaccatggagagttgttata
ggccgattaggaagaataggtcatggagaattaaaagattggagctgtttgctgagtcgc
cgaaacctgcagacgcttagcaagaggctgaaagatgtttgtcggatgtgtggcatatct
gcggctgattctcccagcattctcagtgcttgtctagtggctatggagccacaggggtct
tttgttgttatgccagattctgtgtcaacagggtcagtctttgggcgcagcaccactttg
aatatgcagacctcccagctgaataccccacaggacacatcatgcactcatatactggtg
tttcctacgtctgcttctgtgcaagtagcctcagcaacatacaccactgaaaatattgac
ctggccttcaatgcaaacaacgatggagcagatgaaatgggtatctttgatttgttagac
actggagaagagattgatccagatattactaatatcctttctgcttcacccactggcttc
cctgttcattcaccgggatcccattatcctcatggaggtgatgctggcaagggtcaaggt
acagatcgactgctttcaacagaatctcatgatgaagtaacaaatatccttcagcaacct
ttggcacttggttatttcgtatcaactgccaaagtaggtccattgcccgactggttttgg
tcagcatgtcctcaagcacaaaatcagtgtccgctctttctaaaggcctctctgcaccta
catgtgccttcagtgcaatcagatgagctgctccacagtaaacactcccaccctcttgat
tcaaatcagacttcagatgtcctcaggtttgttttggaacaatacaatgcactctcctgg
ctgacctgtgaccctgcaacccaggacagacgatcctgtctacccattcattttgtggtg
ctgacccagttatataactttatcatgaatatgctgtga
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