Geotrypetes seraphini (Gaboon caecilian): 117349445
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Entry
117349445 CDS
T09159
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03030
DNA replication
gsh03410
Base excision repair
gsh03420
Nucleotide excision repair
gsh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117349445 (RFC2)
03410 Base excision repair
117349445 (RFC2)
03420 Nucleotide excision repair
117349445 (RFC2)
03430 Mismatch repair
117349445 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsh03032
]
117349445 (RFC2)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117349445 (RFC2)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117349445 (RFC2)
DNA replication proteins [BR:
gsh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117349445 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
117349445 (RFC2)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117349445 (RFC2)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117349445 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
117349445 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_16
AAA_14
Viral_helicase1
Mg_chelatase
AAA_24
Rad17
AAA_11
RuvB_N
DNAX_ATPase_lid
AAA_assoc_2
nSTAND3
AAA_19
MipZ
AAA_18
AAA_5
AAA_28
ABC_tran
Gp44_lid
AAA_25
AAA_30
AAA_23
NTPase_1
MeaB
RNA_helicase
SLFN-g3_helicase
DUF815
FtsK_SpoIIIE
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
117349445
NCBI-ProteinID:
XP_033778820
UniProt:
A0A6P8PCP8
LinkDB
All DBs
Position
15:complement(56257170..56300275)
Genome browser
AA seq
356 aa
AA seq
DB search
MEEEEGPGGSSSTSEGAGEVRCKAAASGSKGSAGSYELPWVEKYRPMKLNEIVGNEETVS
RLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRN
KIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKII
EPIQSRCAVLRYTKLTDAQILARLMKVVEKENVQYTDDGLEAIIFTAQGDMRQALNNMQS
TYSGFGFINSTNVFKVCDEPHPLLVKEMIQHCVNADIDEAYKIVAHLWRLGYSPEDIIGN
IFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTSVSSTS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggaaggtcctggaggtagcagctccacttcggaaggtgccggtgaagtg
cgctgcaaggcagcggcctccgggagtaagggctcagcgggaagttacgagttaccatgg
gttgagaaatacagacccatgaagttgaatgaaattgttggaaatgaagaaactgtaagc
agactggaggtctttgcaagggaaggaaatgtgccaaatatcattattgctggtcctcca
ggaactggcaaaacaactagcattctatgcttggcccgtgccttactaggtccagcactg
aaggatgctgttctggaactcaatgcctccaatgacagaggaattgatgttgtgaggaac
aaaattaaaatgtttgctcagcagaaggtgacccttccaaaaggtcggcacaaaataatc
atcctggatgaggcggacagcatgacagatggtgctcagcaagccttgagaagaacaatg
gagatttattctaaaacaacccgttttgcccttgcttgcaatgcatcagataagattata
gagccgatccagtcccgctgtgctgtgttgcggtacacaaaactgacagatgcacagatc
ctggcccggttaatgaaggtggttgagaaggagaatgtacagtatacagatgatgggctg
gaagcaataatcttcactgcgcaaggggatatgagacaggcattaaacaacatgcagtcc
acatattccgggtttggttttattaacagcactaatgtatttaaggtatgtgatgagcct
catccattactggtgaaagagatgatacagcattgtgtgaatgcagatattgatgaagca
tataagattgttgcccacctctggagactgggttactcacctgaagatataattggtaac
attttccgggtgtgcaaaacctttcaaatgccagagtatctcaagctggagttcatcaag
gaaattggatacacgcacatgaagatagcagaaggtgtgaactcactcctacaaatggct
ggattgctggccagactttgccagaagacctccgtatcttctaccagttga
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