Geotrypetes seraphini (Gaboon caecilian): 117349542
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Entry
117349542 CDS
T09159
Symbol
DNMT1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00270
Cysteine and methionine metabolism
gsh01100
Metabolic pathways
Module
gsh_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
117349542 (DNMT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117349542 (DNMT1)
03032 DNA replication proteins [BR:
gsh03032
]
117349542 (DNMT1)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117349542 (DNMT1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
gsh02048
]
117349542 (DNMT1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
117349542 (DNMT1)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
117349542 (DNMT1)
DNA replication proteins [BR:
gsh03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
117349542 (DNMT1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117349542 (DNMT1)
Prokaryotic defense system [BR:
gsh02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
117349542 (DNMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
DMAP_binding
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
117349542
NCBI-ProteinID:
XP_033778982
UniProt:
A0A6P8NRR9
LinkDB
All DBs
Position
16:47571521..47614043
Genome browser
AA seq
1506 aa
AA seq
DB search
MPARTLLSALPEDVRKRLQDLEKDSDGLTEKECVKEKLSLVHGFLQADAQNQLDDLENKF
HKEELSEEGYLTKVNALLGKELCVGNGGCSLSQKSNGCTENGTYTSDEDSGKNGHNGEDD
GTVEMEEEAVTPGSKSRRGRRSKQNTENKSGSRVTRSSGRQPTILSMFSKGSNKRKSGEV
NGEAKVESETKEVVEEQTADKEQDEKRIKVEAKENEGSQINDELSKVKMVQPAKTTPPKC
MDCSQYLDDPDLKYFQGDPDDALEEPEMLTDERLSLFDANEDGFESYDDLPQHRVTSFSI
YDKKGHLCPFDSGLIEKNIELYFSGVVKPIYDDNPCSDGGVRAKKLGPINAWWITGFDGG
ERALIGFTTAFADYILMESSEEYAPIFALMQEKIYMSKIVVEFLQNNPDVSYEDLLNKIE
TAVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEQPVIITPCMRDLIKLAGVTL
GKRRAARRQAIRHPTKIDKDKGPTKATTTRLVSQIFDTFFSEQIEKDEDKENNSKRRRCG
VCEVCQQPDCGKCKACQDMIKFGGGGRSKQACLQRRCPNLAVKEADEDEELDDNIPEMPS
PKKMLQGRKKKQTKSRISWVGEPVKTDGKKEFYQKVCVDSETLEVGDCVSVSPDDPTKPL
FLARITALWEDGSGQMFHAHWFCRGTDTILGATSDPLELFLVDECEDMQLSYIHGKVHVL
YRVPSEGWFLEGGLDVDMKVVNDDGRTYFYQMWYDPEYARFETPPKAQPTEDNKYKFCVS
CTRLAEIRQKEMPRVSDPLEEVDGRVFYSLATKNGVQYRIGDGVLMLPDAFPFSVRLSSP
MKRPQKKDDVDEDMYPEYYRKSTDYIKGSNLDAPEPYRIGRIKEIYCHKRSNGKPNESDI
RLRIYKFYRPENTHKCMKASYHADINLLYWSDEEVNVEFKDVQGRCTVEYGEDLTESIQE
YSSGGSDRFYFLEAYSARTKGFEDPPNHARSSINKGKGKGKGKGKGKGKSSCTLEQSESH
AMENKVPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGSTVFTED
CNVLLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS
YLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR
RRAIILAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNIVRLNSSLFRTITVRDT
MSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRYVPL
APGSDWRHLPNIEVRLSDGTTTRKLRYTHHDKKNGRSSTGALRGVCSCVEGKPCDPADRQ
FNTLIPWCLPHTGNRHNHWAGLYGRLEWNGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR
ECARSQGFPDTYRLFGNVLDKHRQVGNAVPPPLAKAIGLELKLCLLAKVREDAIGNIKQE
KMDTTN
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaggacgctcctgtcagcgctacccgaggacgtcaggaaacggcttcaggac
ctggagaaagacagtgatggcttgactgagaaggagtgcgtgaaggagaagcttagtcta
gtgcatggcttcctgcaagcagatgcacagaatcaactcgatgacttagagaacaaattt
cacaaagaggaactctctgaggagggctacctgacaaaagtgaacgctctgctgggcaag
gaactctgtgttggcaatggaggctgcagcctgtctcagaaatccaatggttgcactgag
aatggaacttacaccagtgacgaggactctggcaaaaatggacacaatggagaagatgat
ggtaccgtggaaatggaggaggaggcagtgacaccaggctccaaaagtcgtagaggaagg
aggagtaagcagaacaccgagaataaaagtggctccagggttacccgaagctctggcaga
cagccaacaattctgtccatgttttccaaaggatcaaacaagcgcaaatctggggaggtg
aatggagaagccaaggtggaaagtgagacaaaagaggtggtggaagaacagacagccgat
aaggaacaagatgaaaagcgaattaaagttgaagccaaagaaaatgaagggtctcagata
aatgatgaactttcgaaagttaaaatggtgcagcctgccaagacaaccccaccaaagtgc
atggattgcagccaatatctggatgaccctgatctcaaatacttccagggagatcctgat
gatgctctggaggagccagaaatgctgacggatgagcgcttatccctgtttgatgcaaat
gaagatgggtttgaaagctatgatgacctgcctcagcacagagtgacttctttcagtatt
tatgataaaaagggccacctgtgtccatttgattctggcctcattgagaagaacattgaa
ttgtacttcagtggagtcgtgaagcccatctatgatgacaatccttgttcagatggtggt
gttcgagccaagaagctggggcccattaatgcctggtggatcaccgggtttgatggcgga
gaaagggctctgatcggctttactacagcatttgctgactacatcctgatggaatccagt
gaagagtacgcccctatctttgcattgatgcaggagaaaatctacatgagcaaaatagtg
gtggaatttctgcagaacaatcccgatgtctcttatgaggatctgctcaacaagattgag
accgctgttcctcctgctgggctgaactttaaccgtttcacagaggactcgctcctgcga
catgctcagtttgtggtggagcaagtggagagctacgatgaggctggagacagcgatgag
cagcctgtaatcatcacgccctgcatgagggacctaattaagttagcaggtgtcaccctg
ggcaaaaggcgtgctgccaggaggcaggcaatccggcatcccaccaaaattgataaagac
aaagggccaactaaagccaccaccaccaggctcgtatctcagatatttgacactttcttc
tcggagcaaattgaaaaggacgaggacaaagagaacaactcaaagcgtagacgctgtggg
gtgtgtgaggtttgtcagcagccggactgtggaaagtgcaaggcttgccaggatatgatc
aaatttggaggtggtggccgtagtaagcaggcctgcctgcagaggaggtgtccaaacctg
gctgtaaaagaagcggatgaggatgaggagctggatgacaacattcccgaaatgccttcg
ccaaagaaaatgctgcaaggaaggaaaaagaagcagacaaaaagcaggatctcctgggtg
ggagaaccagtcaagacggatggaaagaaggaattctaccagaaagtgtgtgttgattct
gaaaccctggaggttggagattgtgtttcagtcagtccagatgaccccacaaaacctctg
ttcctagcaagaattactgcactttgggaagatggcagtgggcagatgttccatgcccat
tggttttgccgggggaccgataccattcttggagccacgtcagaccctctggaactcttt
ctggtggatgagtgtgaggacatgcagctctcctacatccatggcaaagtgcatgttctg
tacagggttccatctgagggctggttcttggagggaggattggatgtggatatgaaagtg
gtaaatgatgacggcagaacctacttctatcagatgtggtatgatccagaatatgcacgc
tttgagacgccccctaaagcccaaccgacagaggacaataagtacaagttttgtgttagc
tgcacccgcctagctgaaataagacagaaggaaatgcccagagtctctgaccccctggag
gaggtagacggaagggtcttctacagtcttgccacaaaaaatggagttcagtacagaata
ggggacggagtcctgatgcttcctgatgctttccccttcagcgtgagactaagcagtccc
atgaaacggccccagaagaaggatgacgtggatgaagacatgtacccagaatattatcgc
aaatccacggactacatcaagggcagcaacttggatgctccagagccttatcgcattggt
cgcatcaaggagatctactgccacaagcgcagcaatggcaagcctaatgaatcggacatc
aggctgcgtatctacaaattctacaggcccgagaacacccacaagtgcatgaaagccagt
taccatgctgacattaatctgctgtattggagtgatgaggaagtcaatgtagagttcaag
gatgtgcagggccgctgtactgtggagtatggcgaggacctgactgaatctattcaggag
tattcctctgggggatccgaccgcttctatttccttgaggcatacagtgcaagaacaaag
ggttttgaagatcctccgaatcatgcccgcagctccataaacaaaggcaaagggaagggg
aaaggcaaagggaagggtaaagggaaatcatcgtgcacgttggagcagagtgagagccat
gcgatggagaataaggttcctaaacttcgcactttggacgtgttctctggttgtggagga
ttgtctgagggtttccaccaagcaggggtttcggaaacattgtgggcaattgagatgtgg
gagccggcagcccaggccttccgcctgaataatcctggaagcacagtttttaccgaggac
tgcaatgtgctactgaagctggtcatgtcaggggagaagacgaactctttgggacagagg
ttgccccagaagggtgatgtggagatgctttgtggcggccccccctgccaaggtttcagt
ggcatgaacagattcaactcacgcacttactccaaattcaagaactctctggtggtttcc
tatctcagctattgtgattattaccggcccaggtacttcttgttggaaaatgtcaggaac
tttgtgtccttcaagcggtccatggtgctgaagctgacccttcgctgcctcgtgcgcatg
ggctaccagtgcacatttggtgtgctgcaggctgggcagtatggagtagctcagacgcgg
agaagagccattattctggcagcagctccgggagagaagttgcccatgttccctgaacca
ctgcatgtctttgcaccacgggcctgtcagctcagcgtggtagtggatgacaagaagttt
gtcagcaatattgtgagactaaactccagtctgttccgaaccatcacagtgcgtgacacc
atgtcggacctgccagagattaggaatggagcttctgcccttgaaatttcctacaatggg
gaacctcagtcctggttccagaggcaaatcagaggttctcagtaccagcccattcttagg
gaccacatctgcaaggatatgagtgcactggtagctgctcgaatgaggtatgttcctctg
gcccctggctcagactggcgacacttgccaaacattgaggtacggctctcggatggcaca
accaccaggaaactgcggtatacacaccatgacaagaagaatgggcgcagtagtacaggt
gccctcagaggtgtctgctcctgtgtagaaggtaaaccttgtgacccagcagacagacag
ttcaacacccttatcccctggtgcctgccccacactggcaacagacacaaccactgggca
ggcttatatgggagactagaatggaatggcttcttcagtacaactgtcaccaatccagaa
cctatgggcaaacagggtcgtgttcttcatccagagcagcatcgtgtggtcagcgtacgt
gagtgtgcccggtcccagggtttcccggatacctacagattgtttggaaatgttctcgat
aagcacagacaggttggcaatgcagtaccacctcctttagctaaggctatcggattggag
ctgaaattatgtcttcttgcaaaggtcagagaagatgcaataggaaacattaaacaggaa
aaaatggacactacaaattaa
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