Geotrypetes seraphini (Gaboon caecilian): 117349559
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Entry
117349559 CDS
T09159
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04330
Notch signaling pathway
gsh04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117349559 (NCSTN)
09133 Signaling molecules and interaction
04519 Cadherin signaling
117349559 (NCSTN)
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Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
HydF_dimer
Motif
Other DBs
NCBI-GeneID:
117349559
NCBI-ProteinID:
XP_033779024
UniProt:
A0A6P8P5S2
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Position
16:complement(42880916..42908869)
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AA seq
690 aa
AA seq
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MAGRLRVFFPLLFGLCWCNSVERKIYIPLNKTAPCVRLMNATHQIGCQSSMNGDTGVIHV
AEKEQDLKWVLEDGLTPPYMVVLDGELFTREVMEKLKMTSRVAGVAVSKRQPSKGFSPDS
TCPNDGFGVYSNTYGPQYAHCNSTVWNPQGNGLSFEDFKFPIFLLQDENETRVIKQCYQE
HNIPLSGSIPQYPLCAMQLFSHMHAVTDTVTCMRRNSLQTSFNINPEEVCDALTDWNIWS
TLKPVNISDILHPDNKVIFVAARLDSRSFFWDVAPGAESTVSGFVTLLAAAEALRKVLND
QQTLLKNVMFVFFQGEAFDYIGSSRMVYDMENGKFPIGLENIDAFLELNQVALRKNSILW
MHTDPVSQKNSSSVQEQVKTLVDALNNASQNSNVTLKEASSTQALPPSSFQRFLQARNIP
GVVLTDHQSAFQNRYFHSIYDTGENIISNYPEGISPEEAQNLLNDTAQSLADVATVLARA
VYQLAGDANLSTSTIQADAATVSKLLYGFLMKLNNSWFQSIIPAEKSIILDNDPPHYYIA
VDNKINPSRVVQYVLANLTGAVFNFTQEGCQKRQNEDKDQYDYYWVQGSLDENSTTRTPF
CVRTTTRITKALSPAFELREWGSTKYSTWTESRWKEIRARIFLVASHELEVITLVVGIAI
LVTSLLVTYFINSKADILFASTCEPGAVAY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaggctccgcgtcttcttcccgctgctcttcggcttatgttggtgtaattcc
gtggagaggaaaatttacattccattaaacaagactgcaccctgcgtccgtctcatgaat
gctacccaccaaattggctgccagtcctctatgaatggggacaccggagtgatccatgta
gcggagaaagaacaggacttgaagtgggtgctggaagacggactaactcccccttatatg
gttgtcctggatggagaacttttcacgagggaagtgatggagaagttgaaaatgacatcc
cgagtagctggtgtggctgtttccaaacgccaaccttccaaaggcttctccccagactca
acgtgtcccaatgatggctttggcgtctatagcaacacctatgggcctcagtacgctcac
tgtaactcaacagtgtggaatccacaaggaaatgggctttcttttgaggatttcaagttt
cccatcttcctgctccaggacgaaaatgaaactcgggtcatcaagcagtgctaccaagaa
cacaacatcccattgagtggctccatcccgcaatatcctctctgtgccatgcagctcttc
tctcacatgcatgctgtcacagacacggtcacctgcatgcggcgcaactctctgcagacc
tcattcaatattaacccagaagaggtttgcgatgctcttactgactggaatatctggagc
acacttaaacctgtcaatatctcggacatcttgcatccagacaacaaagtcatctttgtc
gctgctcggctggacagtcgctcgttcttctgggatgtggcccccggagctgagagcact
gtgtcaggttttgtcaccctgttggctgcagctgaagcccttcgtaaagtccttaatgat
caacagaccttgttgaaaaacgtcatgtttgtcttcttccaaggggaggccttcgattac
attggcagttctcggatggtatatgacatggaaaatggcaaatttcccatcggattggaa
aatattgatgcattcctagagctgaaccaggtagctttgagaaagaactccatcctatgg
atgcacacagaccctgtctcacagaagaacagcagctcagtgcaagaacaggtaaagact
ttggtggatgccctgaataatgccagccagaacagcaatgtgaccttaaaggaagctagc
tctactcaggctcttccaccatcctctttccagcgctttctgcaagcccggaacattccc
ggggtggtgcttactgatcaccagtctgccttccagaacaggtatttccacagcatatat
gacactggggagaacatcatttcaaattatccagaggggatcagcccagaagaagcccag
aaccttctgaacgacacagcccagtccctggcagatgtggccacagtgctggcccgtgca
gtgtaccagctcgctggtgatgccaaccttagcacatctaccatccaagcagatgctgca
acggtctccaagttgctgtatgggtttctcatgaagctcaacaacagctggttccagtcc
atcattccagcagaaaaaagtataatcctagataatgatccccctcattattacattgct
gttgataacaagattaatccctctcgcgtggtgcagtatgtgttggccaacctgactgga
gctgttttcaacttcacccaggaaggatgccagaaacgccaaaatgaagataaggatcaa
tatgactactactgggtgcaaggttccctcgatgaaaactccaccaccaggactcccttc
tgtgtccggactaccacgcgcatcaccaaagccctgtcacctgcctttgagctgagagag
tggggatccaccaagtactctacctggacagagagtcgctggaaggagatccgagccagg
atattcctagtagctagtcacgaactggaggtgatcacactagttgtgggcatcgccatt
cttgtcacctcgcttctggtcacctattttattaactcgaaggcagacatactctttgcc
agcacgtgtgagccaggcgctgtggcttactga
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