Geotrypetes seraphini (Gaboon caecilian): 117349559
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Entry
117349559 CDS
T09159
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117349559 (NCSTN)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
TMP_N
HydF_dimer
WHD_MCM8
Motif
Other DBs
NCBI-GeneID:
117349559
NCBI-ProteinID:
XP_033779024
UniProt:
A0A6P8P5S2
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Position
16:complement(42880916..42908869)
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AA seq
690 aa
AA seq
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MAGRLRVFFPLLFGLCWCNSVERKIYIPLNKTAPCVRLMNATHQIGCQSSMNGDTGVIHV
AEKEQDLKWVLEDGLTPPYMVVLDGELFTREVMEKLKMTSRVAGVAVSKRQPSKGFSPDS
TCPNDGFGVYSNTYGPQYAHCNSTVWNPQGNGLSFEDFKFPIFLLQDENETRVIKQCYQE
HNIPLSGSIPQYPLCAMQLFSHMHAVTDTVTCMRRNSLQTSFNINPEEVCDALTDWNIWS
TLKPVNISDILHPDNKVIFVAARLDSRSFFWDVAPGAESTVSGFVTLLAAAEALRKVLND
QQTLLKNVMFVFFQGEAFDYIGSSRMVYDMENGKFPIGLENIDAFLELNQVALRKNSILW
MHTDPVSQKNSSSVQEQVKTLVDALNNASQNSNVTLKEASSTQALPPSSFQRFLQARNIP
GVVLTDHQSAFQNRYFHSIYDTGENIISNYPEGISPEEAQNLLNDTAQSLADVATVLARA
VYQLAGDANLSTSTIQADAATVSKLLYGFLMKLNNSWFQSIIPAEKSIILDNDPPHYYIA
VDNKINPSRVVQYVLANLTGAVFNFTQEGCQKRQNEDKDQYDYYWVQGSLDENSTTRTPF
CVRTTTRITKALSPAFELREWGSTKYSTWTESRWKEIRARIFLVASHELEVITLVVGIAI
LVTSLLVTYFINSKADILFASTCEPGAVAY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaggctccgcgtcttcttcccgctgctcttcggcttatgttggtgtaattcc
gtggagaggaaaatttacattccattaaacaagactgcaccctgcgtccgtctcatgaat
gctacccaccaaattggctgccagtcctctatgaatggggacaccggagtgatccatgta
gcggagaaagaacaggacttgaagtgggtgctggaagacggactaactcccccttatatg
gttgtcctggatggagaacttttcacgagggaagtgatggagaagttgaaaatgacatcc
cgagtagctggtgtggctgtttccaaacgccaaccttccaaaggcttctccccagactca
acgtgtcccaatgatggctttggcgtctatagcaacacctatgggcctcagtacgctcac
tgtaactcaacagtgtggaatccacaaggaaatgggctttcttttgaggatttcaagttt
cccatcttcctgctccaggacgaaaatgaaactcgggtcatcaagcagtgctaccaagaa
cacaacatcccattgagtggctccatcccgcaatatcctctctgtgccatgcagctcttc
tctcacatgcatgctgtcacagacacggtcacctgcatgcggcgcaactctctgcagacc
tcattcaatattaacccagaagaggtttgcgatgctcttactgactggaatatctggagc
acacttaaacctgtcaatatctcggacatcttgcatccagacaacaaagtcatctttgtc
gctgctcggctggacagtcgctcgttcttctgggatgtggcccccggagctgagagcact
gtgtcaggttttgtcaccctgttggctgcagctgaagcccttcgtaaagtccttaatgat
caacagaccttgttgaaaaacgtcatgtttgtcttcttccaaggggaggccttcgattac
attggcagttctcggatggtatatgacatggaaaatggcaaatttcccatcggattggaa
aatattgatgcattcctagagctgaaccaggtagctttgagaaagaactccatcctatgg
atgcacacagaccctgtctcacagaagaacagcagctcagtgcaagaacaggtaaagact
ttggtggatgccctgaataatgccagccagaacagcaatgtgaccttaaaggaagctagc
tctactcaggctcttccaccatcctctttccagcgctttctgcaagcccggaacattccc
ggggtggtgcttactgatcaccagtctgccttccagaacaggtatttccacagcatatat
gacactggggagaacatcatttcaaattatccagaggggatcagcccagaagaagcccag
aaccttctgaacgacacagcccagtccctggcagatgtggccacagtgctggcccgtgca
gtgtaccagctcgctggtgatgccaaccttagcacatctaccatccaagcagatgctgca
acggtctccaagttgctgtatgggtttctcatgaagctcaacaacagctggttccagtcc
atcattccagcagaaaaaagtataatcctagataatgatccccctcattattacattgct
gttgataacaagattaatccctctcgcgtggtgcagtatgtgttggccaacctgactgga
gctgttttcaacttcacccaggaaggatgccagaaacgccaaaatgaagataaggatcaa
tatgactactactgggtgcaaggttccctcgatgaaaactccaccaccaggactcccttc
tgtgtccggactaccacgcgcatcaccaaagccctgtcacctgcctttgagctgagagag
tggggatccaccaagtactctacctggacagagagtcgctggaaggagatccgagccagg
atattcctagtagctagtcacgaactggaggtgatcacactagttgtgggcatcgccatt
cttgtcacctcgcttctggtcacctattttattaactcgaaggcagacatactctttgcc
agcacgtgtgagccaggcgctgtggcttactga
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