Geotrypetes seraphini (Gaboon caecilian): 117349577
Help
Entry
117349577 CDS
T09159
Symbol
BCAN
Name
(RefSeq) brevican core protein
KO
K06795
brevican
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gsh00535
]
117349577 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117349577 (BCAN)
04091 Lectins [BR:
gsh04091
]
117349577 (BCAN)
Proteoglycans [BR:
gsh00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
117349577 (BCAN)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
117349577 (BCAN)
Lectins [BR:
gsh04091
]
C-Type lectins
Lecticans
117349577 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
I-set
ig
Ig_3
EGF_3
Motif
Other DBs
NCBI-GeneID:
117349577
NCBI-ProteinID:
XP_033779057
UniProt:
A0A6P8PW70
LinkDB
All DBs
Position
16:complement(41482669..41543066)
Genome browser
AA seq
1270 aa
AA seq
DB search
MTRANQLLFVVWQAALAVASIFRENSDDLKTLEVSIPTSPPINAILAGTLAIPCHITHLV
PFPTPTLGRQAVLATPRVKWTFISDGKEVEILVARGQKVKISEEYRSRVSLPYYSLFPTD
ATLELSNLRSNDSGIYRCDVQYGIEDDHALLEVKVKGVVFLYRDGARRYAFTFSRAQEAC
TGIMAQVATAEQLFAAYEGGYEQCDAGWLADQTVRYPIQTPREACYGDMDEFPGVRNYGV
VDPEEKYDVYCYIEDLHGEVFLGSVPGKFSLAEGKEHCKREGADLATPGQLYAAWNEGMD
HCNPGWLSDGSVRYPIVSPRERCGGNTPGVKTIFLFRNQTGFPDSMARYDVYCFREITNS
STESPMDYQNTQTEGVQEITDSSTESPEEYESTQIEGIQQIITITEKLQELKLGKEAAER
EARGSVESATVPGDTNGSEGLRALEEATPVSEDPPATSPDSLGSQGFLQQAPGIEAVDGA
QNLPSHEGSGFSGTESGSLVHQGDESDFRTEAAVVLREGTSGSVGETTLGPEHIPNSSSE
VSGRTSGQSTTWEDGEQVPERLVHPTETLPGGTSTAGPYTELNLWGRYATASPTDFLEPG
GSGSFEGTSQFDPMILTSTASKEHDADPEERATTHGTLLSTLNIHIFKASSESDLTSDVR
HRTEEIPAAHLTTLQPEAHDRASDRMTGENAGTEGRLASAIDQNENEDTYSENGVGLSGS
QFEASGQEIHGTFSGGPATESPHSPRWFMDGSVSGEASGVTSEHSPDPTGHPEITRDQDT
SEGPTAATLSVASTAAAEFETIAEIQGDTESETQDGSTSHSHEGSGEPSELLLFEATGIS
LRTKPTAAEPEATVIPLTLATQEASRHLDLNEASGAAPFSVLPSTDEPLRTDTMQPSGQV
TETSTSHSFHIRETPPGTKNQGSLLAHKFVVTETSVELSTSPVTIDLMETSFAGIGEGPG
AGGYGSSPSLSRLLTSADELTSPLFHNSGEAASQSSGGTPAVPLSAALPRPALPTEKASL
GAALNLTDECIPNPCHNGGTCMEMEDRVTCLCLPGHGGDLCETSVRECQRGWDKFQGFCY
QHFLSRKNWEEAELDCRNYGGHLVSIMSPEEQSFINSRYKNYQWTGLNDKTIEGDFQWSD
GNPLLYENWHHGQPDSYFLSGEDCVVIVSRDQGEWSDVPCNYHLSYTCKMGLVSCGFPPE
VENALVFGKPKSNYEINSIVRYRCHGGFIQHNSPIIRCQEDGQWEQPHITCAPNTQSREP
LGTVLHHSQE
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgacgagagccaatcaactgctgttcgttgtctggcaggctgcgctggctgttgcctca
atcttcagagagaattcagatgatctgaagactctggaagtatcaattcccaccagtcct
cccatcaatgccatccttgcgggtaccctcgccatcccctgccacattacacatctagtc
ccatttccaaccccaaccttgggccgtcaagctgttctagccacaccccgcgtcaaatgg
actttcatttccgatgggaaggaggtggagatccttgtagcaaggggccagaaagtcaag
atcagcgaagagtacagatctcgagtgtccttgccatattactcactgtttcccacagat
gccaccttagagctgtccaatctgaggtcaaatgactcaggaatataccgttgtgatgta
cagtacggcattgaggatgaccatgctctactggaggttaaagtcaaaggggttgtcttc
ctgtaccgggatggagcgagacgctatgcctttaccttctctagggctcaggaggcttgc
actggaatcatggctcaggtagccacagcagagcagctgtttgctgcctatgaaggtggc
tatgaacagtgcgatgcgggctggcttgcagatcaaacggtcaggtaccccatccagacc
ccccgggaggcttgttatggagacatggacgaatttccaggtgtgaggaattacggtgtg
gtggatccagaagaaaagtacgatgtgtattgttacattgaagacctgcacggagaagtt
tttctgggttctgtgccaggcaagttctctctggcggaaggcaaggagcactgcaagagg
gaaggggcagatctggccactccggggcagctttatgcggcctggaacgagggcatggat
cattgcaacccgggctggctctccgatggcagcgttcgctatcccattgttagcccacgg
gaaaggtgcggcgggaatacgccgggcgtaaagaccatcttcctgttccgaaaccagacg
ggattccccgattccatggccagatacgacgtgtattgcttcagagaaataaccaactcg
tccacggagtctccgatggattaccaaaacacacagactgaaggggtacaagaaataacc
gactcgtccacagagtcgccagaagagtatgaaagcacacagatcgaagggatccagcaa
attattaccatcacggaaaagctgcaggaactgaagttaggaaaagaagcggcagaaaga
gaggcaagaggatccgtggaatccgccactgttcccggggacacaaatggcagcgagggc
ctccgtgctctggaagaggcgacacctgtgtctgaagatcccccagcgacgtcaccagac
agtcttgggagccagggatttctccagcaagccccaggcatagaagctgtcgatggagcc
cagaacctgcccagccatgaaggatctgggttttctggaacagagagcgggagccttgtt
catcaaggagacgagagcgattttagaacagaggcagctgtggtactaagagaaggaaca
tctggcagtgtgggcgagaccacgcttggtccagaacacatacccaactcttcaagtgaa
gtgagcggcagaacttctggacaaagtacgacgtgggaagacggagaacaagtcccagag
cgtctggttcatcccactgaaacgcttccaggtgggacttcaacagccgggccctacaca
gagttgaatttgtggggacgctatgctacggctagccccactgatttcttggagcccggt
ggatctggttcctttgaaggaacaagccaatttgatccaatgatactaacttccacagct
tccaaagagcatgacgcagatcctgaagaaagagccactacacatggtaccttgctcagc
actttaaacattcacatcttcaaagcaagcagtgagtcagatttgacttctgacgtgagg
cacagaaccgaggaaatccctgcggctcatctgacaactcttcaacctgaggcgcatgac
cgtgcgtctgaccgcatgactggagaaaatgctggcacggaaggacggctggcaagtgcc
attgaccagaatgagaatgaagacacatattctgaaaatggcgtagggttatccggatcg
cagtttgaagcttcgggccaagagattcatggtacgttctcgggaggacctgccacggag
agcccgcattcccccagatggttcatggatggatctgtttctggagaagcttctggagtg
actagtgagcattcccctgatccaaccgggcatccagagatcaccagagaccaggacaca
tctgaaggacctactgccgcgactttgagtgtagctagcacagctgctgcggagtttgaa
actatcgcagaaattcagggagacacagagtcagaaacccaggatggctcaacttctcac
agccatgagggaagtggagaaccctcggaacttctgttgtttgaagccacaggaatttcc
ttgagaacaaaacctaccgctgctgagcctgaggccacggtgattccacttactcttgcc
acacaagaggcctctcgccatttagatttaaacgaagcttccggggctgcacctttctct
gttctcccgtccactgatgagccactgagaacggacaccatgcagcccagcggacaagtg
accgagacttcaacttcacacagctttcacattagagagacgcctcctggcacgaaaaac
caaggtagcttactagctcataaattcgtagtcaccgagacgagtgtagagctaagcaca
tctccggttaccatagacttaatggaaacatcctttgcgggaatcggtgaaggcccggga
gcaggtggctatggctcctctccatctttgtcccgcctgttgacctcggcggacgagctc
acctcgcctctcttccacaactcgggagaagcagccagccagagctctggtgggactcct
gcggtaccgttgagcgcagcgcttccgcgtcctgctttgccaacggagaaggcaagccta
ggagcagcactgaaccttacagatgagtgcatcccgaatccttgccacaacggagggacc
tgcatggagatggaagacagagtcacctgcctctgtcttccaggccacggaggagatctt
tgtgaaacaagtgttcgggagtgccagcgcggctgggacaagttccagggcttctgctac
cagcactttctgagccgcaagaactgggaagaggccgaactggactgcaggaactacggg
ggacacctcgtaagcattatgagccccgaggagcaaagttttatcaacagcagatacaag
aattatcagtggacgggcctgaatgacaagaccatcgagggagactttcagtggtctgat
ggaaacccattgctctatgagaactggcaccatggtcagcctgacagctacttcctgtcc
ggagaggactgcgtggtgatcgtgtcgcgtgaccagggggaatggagtgatgtgccctgc
aactaccacctctcctacacctgcaaaatgggtctcgtgtcttgtggctttccgccagaa
gtggaaaacgctttggtctttgggaaacccaaaagcaactatgagatcaactccatcgtg
cggtaccggtgccacggcggcttcatccagcacaactcacccatcattaggtgccaagag
gatggtcagtgggagcagccacacattacctgtgctccaaatacacagagcagagaacca
ctcggcacagtgcttcaccattcccaagagtga
DBGET
integrated database retrieval system
