Geotrypetes seraphini (Gaboon caecilian): 117349880
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Entry
117349880 CDS
T09159
Symbol
TAP2
Name
(RefSeq) antigen peptide transporter 2 isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh02010
ABC transporters
gsh04145
Phagosome
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117349880 (TAP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117349880 (TAP2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117349880 (TAP2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsh02000
]
117349880 (TAP2)
Enzymes [BR:
gsh01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
117349880 (TAP2)
Transporters [BR:
gsh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
117349880 (TAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
Ku_PK_bind
AAA_29
TMEM252
Rad17
Motif
Other DBs
NCBI-GeneID:
117349880
NCBI-ProteinID:
XP_033779437
UniProt:
A0A6P8NSU8
LinkDB
All DBs
Position
16:55169481..55195716
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AA seq
723 aa
AA seq
DB search
MKRMLMKAGPLFLALFLLDVALTSFLTWLYLHFHPFSPLSATWALALLRLVSLSVVAGKL
LEKMVPPQHVFLHLMVLTLTSPVCDTIWFLFLQEPVDLHSGVAQSLLPLYLVCLLSGLFW
ELLFPWHPVRDNEGARTEANGRRKAREALGRLWAYSRPDKVPLSGGFVFLTLAVICEMFI
PYYTGRVIDILGSQYKETEFSTTISLMALYSMASSLSTGCRGGLFTLTIARLTRRLRVLL
FKSVVQQEIGFFESTRTGEITSRLATDTAQMSRSIALNVNVFVRSLVKVIGVYCFMLSLS
WQFTLLTLIDPPVTVLIQEIYNRYYEGVVKEVQDSIARSNHVAGETIHAIRTVRSFATEQ
EEAERYNARLLETHQLKVRRDVIRALYVLVRRLAELAMKVVMLYYGQHLIRTGQMTIGNL
VVFIMYQAESGRYIRNLVYIYGDMLHSMRAAEKVFQYLDRKPEVTLEGVLKPQSAKGSVQ
FKNVSFSYPTRPDVPALKNVSFELRPGKVTALVGPSGGGKTTCISLLERFYEPQEGEILL
DGRPLRDYDHKYLHTKVSLVGQEPVLFARSVTENVTFGLQDYSMEEVVRAAQEAYADPFI
QQMEKKYLTDVGEAGGTLAGGQKQRIAIARALIRRPRLLILDEASSSLDIESEHKIQETL
SKMQGLTVLVVAHRLKTVENADKIIVIESGRVVEQGDHGQLMQKEGMYHRLVQRHFTQNG
DSE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggatgctgatgaaggctggccctctgttcctggctctcttcctcctggatgtt
gcccttacctctttcttgacatggctgtacctacattttcatcccttctctcccctcagt
gccacctgggctctggcactcctgcgattagtgtctctctccgtggtggcaggcaaactc
ctggagaagatggttccgccccagcatgtcttcctacacctgatggtgctcaccctcaca
tctcctgtgtgtgacaccatctggttcctcttcctgcaggaacctgtggatctgcactct
ggtgtggcacagtccctgctgcccttgtacctagtctgccttctctctggcctcttctgg
gagctcctgttcccctggcatcctgtgagggacaatgagggagccagaacagaggcaaat
ggcaggaggaaagcccgggaggcactggggcgactttgggcttactctagacccgacaaa
gtgccattgtctggaggctttgtcttcctcacccttgctgttatatgtgaaatgtttatt
ccttattacacaggaagagtgattgatattctgggatcccagtacaaagagactgagttt
tccaccaccatctccctcatggctctgtactccatggcaagctccctgtccactggctgc
agaggtggactattcactctcaccatagcccgactcacccggcgactccgggtcctgctc
ttcaagtctgtggtacagcaagaaattggattctttgagtccaccagaacaggtgagatc
acctcccgcctggccacagacacagcgcagatgagccgctccatcgcactcaacgtgaat
gtttttgtgcgtagcctggtgaaagtgataggggtttattgtttcatgctgagcctctcc
tggcaattcacgctgctcactcttattgacccgcctgtcactgtgttgatccaggaaatc
tacaaccgctattacgagggtgtggtcaaggaagtgcaagattccatcgcccgatccaac
cacgtggccggggagactattcacgccattaggactgtgcgcagctttgccaccgagcag
gaggaggccgagcgctataacgctcgactcctggagacgcaccagctgaaggtgcgacgg
gatgtgatccgggcattgtatgtgctggtccgcaggctcgcagagctggcaatgaaggtg
gtcatgttatactatggacagcatctaatccgaaccggacagatgaccatcggaaacctg
gtggtcttcatcatgtaccaggcagagtcggggagatatataaggaacctggtgtacata
tacggggacatgcttcattccatgcgagccgcagagaaggtcttccagtacctggacagg
aagccagaggtcaccttggagggggtcctgaagccccaaagcgcaaagggctctgtgcag
ttcaaaaatgtgtccttctcctacccgacccgtccggatgtgccagcgttaaagaatgtc
tcttttgagctaaggcccgggaaagtcacagctctggtgggcccctcgggaggtgggaaa
acgacctgtatctcactgctggagcgattctatgagccccaggagggagagatcctgctg
gatggaagacccctgcgggactacgatcataaatacctccataccaaggtttcactagtg
gggcaggagccagtgctttttgctcgctccgtgacagaaaacgtcacttttggcctgcaa
gattattcgatggaggaagtggtgagagccgcccaggaagcttacgctgatcctttcata
cagcagatggagaagaagtacctgacagatgtgggtgaggctggtgggacgctggccggg
ggacagaagcagcgcatcgctattgctcgcgcgctcatccggagaccgcggcttctcatc
ctggacgaggcctccagcagtctggacatagagagcgaacacaagatccaggaaacgctc
tccaagatgcaggggctgacggtgctggtcgtcgctcatcggctgaaaacggtggagaac
gcagataaaatcatcgtgattgaaagcggacgggtggtggagcaaggggaccacggacag
cttatgcagaaggagggcatgtaccatcgactggtccagaggcacttcacccaaaacggg
gattcggaatga
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integrated database retrieval system
