Geotrypetes seraphini (Gaboon caecilian): 117349906
Help
Entry
117349906 CDS
T09159
Symbol
ARHGEF11
Name
(RefSeq) rho guanine nucleotide exchange factor 11 isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117349906 (ARHGEF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117349906 (ARHGEF11)
Membrane trafficking [BR:
gsh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117349906 (ARHGEF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
RGS
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
117349906
NCBI-ProteinID:
XP_033779494
UniProt:
A0A6P8P748
LinkDB
All DBs
Position
16:complement(42215762..42323303)
Genome browser
AA seq
1553 aa
AA seq
DB search
MSVRPPQTAIDRLSSLSSLGDSGPERRSPGHHRQPSESNETTGLVQRCVIVQKDQHGFGF
TVSGDRIVLVQSVRPGGAAMRAGVQEGDRIVKVNGTLVANSSHLEVVKLIKSGAYVALTL
LGSPPTSVGLSGLQQDLSSSGALRSTQMSPVPPPPPPLPPPQRITGPKPLQDPEVQKHAT
QILRKMLQQEETELQSLCDVYSRNSSALLEEQIERARRRVHQLQLKIQQETGGAVDPVKS
HFEPSPVSRRAMEGRFSLDSQDGDSGLDSGTERIPSISEISLNRNSVLSDPGLDSPRTSP
IISMKVFQHRRQGSDTAFIPGVDTGSPRSLIIGPEEDYDPGYYITECDGLFQDLEKLKSR
PAHLGVFLRYIFSQADPNPLLFYLCADVCQQMGPKDARVLGKEIWTIFLEKNAPLRVKVP
ESSLTEIDSRLRGTDDVRNALLEAQDMVLPEIQEQLQDYRTKRTMGLGGLYGENDLLDLD
ADAQKERQVAEKQIAQLGEILSKYEEDRSSPMGFALSTYMNNAGLKVRDSRPASSSEKSQ
TFPDKDKWLPFFPKVKKQSSNTKKDKDRESAEDKKRNPILKYIGKPKSSSQSTFHVPLSP
GEVKPGNVRNIIQHFENNQHYDPQDLAMQRLSTGSFPEDLLDSESSRFEVKLGRSESLKG
REEMKRARRSDNVPRSRSDVDMDAAAEATRLHQSASSSTSSLSARSLENPTPPFTPKMGR
RSIESPNFGFGGDVLLPNLQEDDLGQLSDLEPEPDSQNWQHTVGREVAPSLPQKERSRQE
VIHELFVTEASHLRILRVLDLIFYQRMKKENLLSHDDLKLLFPNLSELIEIHNSLSESMK
RFREEGPVIREIGDLILSRFDGSAGEEIQQEAAKFCSHQSFALELIKTKQRKETRFNLFI
QEAESSPQCRRLQLKDLILSQMQRLTKYPLLLDNIIKYTDHDTSEHTKLCRCRDRCREIL
KHVNEALKQAENQHRLIMYQKRLDTTSLERTNNSLAAEFKNLDLTTRRMIHEGPLTWRIA
KDKTTDLHVLLLEDLLVLLQKQDEKLVLKCHSKTTLGSSDTKQTFSPVIKLNSVLVRSVA
TDKRALFVICTSELGPQIYELVALTSSEKNMWKELVEEAAKSAMRNASCMSKCKLPEKAS
QGPSPVSMVLQDADVGSSISAEDSSGLELPSMHDDSAMFLDNGKHSALLEEQEVECSEEE
EAASMATQPQEEEEMVPLAGHLPFQHTEFMERLADSALEDVENLRQLILRSVLPHRDSGP
SQDWDLVVEADDDLTPTPSVTGGALHFWDSRSTDLHAPEGWHPHGVRHDSTGHLGSSSES
CRTEDPSSKYMDQTSMCSSEGQRAENEATLKPDQEEHKPCGQGSFKVVRKAEVVGSSDVI
PFPDSSQSETELQKVGGGANLDGNCFYVALPNCPMESSTDEQEAPAIHRQWTSSPSCPSS
RQQQSHEDPQSLATCSSPASSLIIQDVDTIFRTIEQLTQKLNRLKEVEKAHRELMKSLED
AQLRRDGAMLETNRQKDSHLISEGTPPFYMSSLYSVSASEDGPADPPEEAPRL
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaggccaccccagactgccatagacaggttaagtagcctgtcctctctgggc
gattcaggtccagaacgaaggtcacccggtcaccatcgacagccatcagagtccaacgaa
acaacaggtttggtgcaacgctgcgtcattgttcaaaaagatcaacatggatttggtttc
acagtcagtggagatcgcattgtcctggttcagtctgtccggccaggaggagccgccatg
agagctggtgtgcaagagggagaccgaatagtcaaagtgaatggcaccttggtggcgaac
agctcccacctggaagtagtgaagctcatcaaatctggtgcttatgttgcacttaccctt
ctgggttcccctcctacctcagtgggactctcagggctccagcaggacttgagctcctca
ggggctctcaggagcactcagatgtccccagtgcctccacccccacctccattgcctcct
ccgcagagaatcacagggcccaaaccactgcaggacccagaagttcaaaagcatgcaact
cagattcttcgaaagatgctgcagcaggaagagacagagttgcagagcctgtgtgatgtg
tatagtcggaattcctctgccctcctcgaggaacagatcgagagagcccgccggcgagtg
caccagctgcagctgaagatccagcaggagacaggcggagcagtggatccagtaaagtcc
cactttgaaccaagccctgtgagtcgcagagctatggagggccgtttctctctggattcg
caggatggggacagcggcctagactctggtacggaacggatcccatccatcagcgagatc
tcgctgaatcggaactctgttctgtctgatccgggattggacagcccacgaacatcaccc
atcatttcaatgaaggtttttcaacatcgccgacaggggtctgatacggccttcatccca
ggagtggacacaggctcaccaagatccctaattattggaccagaggaagactacgatcca
gggtattacatcactgagtgtgatggcctcttccaagacctggagaagctgaagtcccgt
cctgcccacctgggcgtcttcctgcggtacattttctctcaggcagatccaaaccctttg
ctgttctacctgtgtgcagatgtttgccaacagatgggacccaaggatgcccgtgtgctg
gggaaggaaatttggactatcttcttggagaaaaatgcgcctctgagagtgaaagtccca
gaatcatcattgactgaaatagattctcgcttacgaggtacggatgatgttcgaaacgca
ctcttggaggctcaggatatggtgctgccagagatccaggagcagctacaggactacagg
acgaaacgcaccatgggtttgggaggtctgtatggtgaaaatgacttgttggacttagat
gccgatgcacagaaggagcggcaagttgcagagaagcagatcgcacagctgggagagatt
ctgtcaaagtatgaggaagacaggagttcaccgatgggctttgctctgagtacctacatg
aacaatgccggcctcaaggtgagagattcacgcccagccagctcttcagagaaatcacag
acttttccagacaaggacaagtggcttccgtttttccccaaagttaagaagcagagcagc
aacaccaagaaggacaaagatcgagaatcagcagaagataagaagcgaaaccccattctg
aaatacattgggaagcccaagagctcttctcaaagcacatttcatgttcctttgtcccct
ggtgaagttaaacctgggaatgtgagaaacatcatccagcattttgagaacaatcagcac
tatgacccccaggatttggcaatgcagcgtctgtccacaggcagcttccctgaagacctg
ctggattctgagagctccaggtttgaggtgaagctgggtcgctctgagagcctgaaggga
cgggaggagatgaaaagagcacgcagatctgacaatgtgccccgctccagaagcgacgta
gacatggatgcagctgcagaggccacaaggctccaccagtctgcatcctcgtcgacctcc
agcctatctgccaggtccctggagaatcccacgccaccatttactcctaagatgggtcgc
aggagtattgagtcaccaaattttgggtttgggggagatgttctcctacctaacctccag
gaagatgacttgggtcaattgtcggatctggagccagagccggactcccaaaattggcag
cacacagtcgggcgggaagtggcacccagtttaccgcagaaggaaagaagcaggcaggaa
gtgatacacgaactgtttgtaacagaggcatctcacttaaggatcctccgcgtactagat
ctcatcttctatcagcgtatgaagaaggaaaacctgctctctcacgatgacttgaagctt
cttttcccaaacctgtcagagttgattgagatacacaactctctgtcagaatcgatgaag
aggttccgggaagaagggccagtgatcagagagattggcgatctcatattgtcccggttt
gatgggtcagcaggagaagaaatccagcaggaagctgccaaattctgctcccaccagtct
tttgctctggagctgatcaaaaccaagcagaggaaggaaaccaggtttaatctcttcatt
caggaagcggagagcagccctcagtgccggagacttcagctgaaagatctcattctctca
cagatgcaacgcctcaccaagtaccctctactgctggacaacatcatcaaatacacagac
catgacacttcagaacacacaaagctgtgccgttgtcgggatcggtgccgtgagatcctc
aaacatgtgaatgaggccctaaagcaagccgagaatcagcatcgactgatcatgtaccag
aaacgacttgataccacctcactggagaggaccaataactccctggccgctgagtttaaa
aatcttgacctcaccacgaggcggatgatccacgaaggacctctgacctggaggatcgcc
aaagataaaactactgatcttcacgtgctgctgctcgaagatctcttggtactcctgcag
aaacaagatgaaaaactggtgctgaaatgtcacagcaagaccacattgggctcctcggac
acaaaacagacgttcagccctgtgatcaagctcaactccgtgctcgtccgttctgtggct
acagacaagcgagccctgtttgttatctgtacgtcagagctgggaccccagatttacgaa
ctggtggcactcacgtcttctgaaaagaacatgtggaaagagctggtggaggaagcagca
aaaagtgcaatgaggaacgcctcatgcatgtccaagtgcaagctgccagaaaaggccagt
caagggccatcgcctgtcagcatggtgctccaggatgctgacgtcggctccagcatctct
gcagaagacagctcaggcctcgagcttccctcaatgcatgatgattctgcaatgtttcta
gacaacgggaagcactcggcactcctggaggagcaagaggttgagtgcagtgaggaagaa
gaggcagcttccatggcaacacagccacaggaggaggaggaaatggtaccgcttgctggc
cacttgcccttccagcacacagaattcatggagagattagcagattctgctctggaagat
gttgagaacctacgacagttaattctgcggagtgtgctaccccacagagactctggaccc
agccaagattgggatcttgtggttgaagcagatgatgacctcacaccaacgccttcggtg
accggaggagcactgcatttttgggactccaggagcacagacttgcatgccccagaaggc
tggcacccacatggggtgagacatgacagtacagggcatttgggcagcagttctgagagc
tgcaggactgaggacccaagttctaagtacatggaccagacaagtatgtgctcaagtgaa
ggccaacgtgcagagaatgaagccactctaaaacctgaccaggaggaacacaagccctgt
gggcaagggagcttcaaagtggtcagaaaagctgaggtggtgggcagtagtgatgtcata
ccgttcccagacagcagccaatcagaaactgagttgcagaaagttggaggcggagctaat
ttagatggaaattgtttttatgtagcattgccaaattgccctatggagtcttccacggat
gagcaggaagcaccagcaatccaccggcagtggacatcaagtccctcctgccccagctcc
cgccagcagcaaagtcatgaggacccccaatctttggcaacctgcagttcgccagcctcc
agcctgattatccaggatgtagatacgatcttcaggacgatagaacagctaacacaaaaa
cttaacaggttaaaggaagttgaaaaagcccaccgggagttaatgaagtctttagaggat
gcacagttgagaagagacggggccatgctggagacaaatagacagaaagatagccatctc
atctctgaagggactcctcctttctacatgagcagcttgtactcagtgtctgcttcagag
gatggccccgccgaccctcccgaagaagctcccaggctgtga
DBGET
integrated database retrieval system
