Geotrypetes seraphini (Gaboon caecilian): 117349929
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Entry
117349929 CDS
T09159
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C-like isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117349929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117349929
Spliceosome [BR:
gsh03041
]
Common components
Common spliceosomal components
hnRNP proteins
117349929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF4763
Muted
CobT
RRM_5
Motif
Other DBs
NCBI-GeneID:
117349929
NCBI-ProteinID:
XP_033779557
UniProt:
A0A6P8NT52
LinkDB
All DBs
Position
16:complement(11715413..11805409)
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AA seq
319 aa
AA seq
DB search
MERRERGAHLSEGGEMQPGFLIFDYSAATRPRTVGMASNVTNKTDPRSLNSRVFIGNLNT
LVVKKSDVETIFSKYGKIVGCSVHKGFAFVQYSNERNARTAVAGEDGRMIAGQVLDINLA
AEPKVNRGKTGVKRSAADMYGSSFDLDYDFQRDYYERMYSYPAARVPPPPAIARAVVPSK
RQRVSGNTSRRGKSGFNSKSSQRGSSSKSGKLKGDDLQTIKKELSQIKQKVDSLLDSLER
IDREQSKQSEMKTDDEQSGKKEETHMKMQSEEGVDSGEEGDLMDDDEEQGVETPEARKDD
KEAEEGEDDGDSANGEDDC
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaacgaagagaaaggggcgcgcatttgtctgaaggcggggaaatgcagccaggtttt
ttgatcttcgactacagtgctgccacccgtccacgtactgtcggtatggccagcaatgtg
acgaacaagacagacccgcgctcactgaattcacgggtcttcattggcaatttgaataca
ttggtggttaagaagagtgatgtggagactattttttctaagtatggcaagatcgtggga
tgctcagtgcacaagggctttgcctttgtgcagtactccaacgagcgtaatgcccgcact
gctgtggctggtgaggatggtcgcatgattgctggccaagtcctggacattaatctggca
gctgaacccaaagtgaatcgcggcaagacaggagtaaagaggtctgcagcagacatgtac
ggttcttcttttgacctggactatgattttcagcgggattattatgaaaggatgtacagc
tacccagcagcacgtgtgcctccacctcctgctattgcacgagctgtggtgccatcaaag
cgccagcgagtgtcggggaacacctcccgtcggggtaagagcggtttcaactctaagagc
agccagagaggatcctcctcaaagtccgggaaattgaaaggtgatgacctgcagaccatc
aaaaaggagttgagccaaatcaagcagaaagtggattctctattggatagcctagagagg
atcgacagggagcagagcaaacaatcagagatgaagacagatgatgagcagtcaggaaag
aaggaggagacgcatatgaagatgcagtctgaggagggtgtggactctggtgaggaggga
gacttgatggatgacgacgaggagcagggtgtagaaacgccggaggccagaaaggacgat
aaggaagcggaggaaggcgaggacgacggggacagcgccaatggagaagacgactgttag
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