Geotrypetes seraphini (Gaboon caecilian): 117349955
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Entry
117349955 CDS
T09159
Symbol
NOTCH3
Name
(RefSeq) neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04330
Notch signaling pathway
gsh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117349955 (NOTCH3)
04371 Apelin signaling pathway
117349955 (NOTCH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_3
Ank
EGF_2
Notch
NODP
NOD
Ank_3
Ank_4
Ank_5
EGF_Teneurin
cEGF
DUF2970
Motif
Other DBs
NCBI-GeneID:
117349955
NCBI-ProteinID:
XP_033779639
UniProt:
A0A6P8P7G3
LinkDB
All DBs
Position
16:53426563..53622053
Genome browser
AA seq
2472 aa
AA seq
DB search
MYKSGGGQRGTDGGMGQPRCGLCLQLLQLALLTALMQRGAGLQCSEGSNPCENGGKCTMY
SNGVKACVCRPGLIGDRCQFQDPCHRSPCFSGGVCTTSLQNGTVQFGCTCPRGFRGQDCS
LIDACASNPCANGARCANWNSRYNCTCTLGYQGRNCRNDVDECRTPGMCQNGGTCLNTPG
SFKCQCESGYTGPLCENLYVPCAPSQCLNGGTCRQTGDLTYECACLPGFEGHNCEINIDD
CPGNKCANGGTCVDGVNTYNCQCPPEWTGQFCMTDVDECQLQPNACHNGGTCFNVLGGHT
CICVNGWTGESCSENIDDCATAVCFNGATCHDRVASFYCECPMGKTGLLCHLDDACVSNP
CHEDAMCDTNPVNGRAICTCPLGFAGGACDQDVDECSIGANPCEHFGKCVNTEGSFQCQC
GKGYTGPRCESDINECMSMPCQNDATCLDRIGEFTCICMSGFTGTYCEINVNECDSNPCV
NGGLCKDIVNGFTCSCPSGFTGNMCQTDVDECASTPCQNGAKCVDRPNGYECRCAEGFEG
PLCDQNHNDCSPDPCHHGTCIDGIAGYTCSCVPGYTGYRCENQIDECHSSPCQNGGKCMD
LVNKYLCKCQRGTSGVNCEVNHDDCASNPCDYGICRDGIDRYDCICKPGFTGPLCNVEIN
ECASNPCKNGGTCVDKENGFTCLCPEGFHDPHCYSEVDECSSNPCVHGTCRDDINGYKCD
CEPGWTGPNCAVDKNECESNPCQNGATCSNLVNGYRCRCKDGFHGTYCQINVNDCLSSPC
LNRGTCVDGIARYSCLCNLPYTGRNCENVLTPCSPNPCENSGACDHTPDYESFICNCAPG
WQGQKCSTDINECDLNPCKNGGTCTNRPGTYTCSCRPGFTGINCETDLNDCIPNPCRNGG
TCKDLIDAFQCTCMPGFTGTRCTKEINECLSSPCRNGATCTDYVNSYTCTCQAGYTGIHC
EKNIQDCTESSCFNGGTCIDSLDTYVCRCQPGFTGFNCQHEINECESRPCLNGGICIDGV
ETYRCTCPQGYTGTQCQNLLDWCSQSPCQNGGRCHQTGATFKCECPGGWTGSYCDIPSVS
CETAAAQRRVRVDQLCRFGGSCISVGNTHKCICKGSYTGSYCETEVNHCELNMCRNGATC
RGYVGGYLCECPPGFEGKNCENDINECQSQPCQNGGTCVDLIGRYMCSCPPGTLGVLCEI
NEDDCTTTPGNRAPKCLNNGTCVDKVGGYRCTCPPGYTGERCEGDVNECSPNPCDPQNSQ
DCVQLSNDFHCVCKSGFTGRQCLSIINTCESQPCQNNGECKVAVNTPLGYACRCLSNYFG
PNCERNALSCRELMCHNGGSCRQTPLGAHCTCPSGFLGSDCRLHSNGSCASAPCYHGATC
RETQRFPYFQCSCHRAFTGGRCERFIRPTPLPLPPEAPHHCLREDCRTKAGDRYCDRECN
VPACQWDGGDCSLTVDDPWKKCEALQCWRFFNNSRCDEACNTPECLYDNFDCKSQEKSCN
PVYEKYCTDHFQDGRCDQGCNNEECGWDGLDCAGEVPEHLAKGVLVLVVLLPPEELLRTG
AAFLQKLSAILHTSVRFRIDKEGNYMIYPYYRPTSRLQKRELDKEVIGSTVNLEIDNRLC
FQASDKCFPDAESAADYLAALSAVERLEFPYPIREVRGEPFEPDTTNVLPVVVVVAAVIL
LVILVLGVLVVRRKRENSHLWFPEGFTLKKASSKKSRREPLGQDSLGMKSISKGESLIGD
HSEDWLDTDCPEAKRLKVEEHGVSDSEDPVDCRQWTQHHLAAADIRMPPSMALTPPQGEF
DTDGMDVNVRGPDGFTPLMLASFCGGGMELDVNEDDEAEDSSASIISDLICQGANLGAQT
DRTGETALHLAARYARADAAKRLLDAGADTNAQDNTGRSPLHAAVAADAQGVFQILIRNR
STDLDARMLDGSTALILAARLAVEGMVEELIACHADVNAVDELGKSALHWAAAVNNIEAT
LALLKNGANKDMQDSKEETPLFLAAREGSYEAAKILLDHFANREITDHMDRLPRDIAQER
MHHDIVQLLDEYNTVRSPQGPGNSIGGHTLSPLMCPPNGFMSNLKQTPQGKKNRRPGAKN
GATGSTASLARETKESKGRSKKLALDCQGSLIESSVTLSPVDSLDSPRSAYVTNPTSPIM
TSPGVFHPAAPSMSVPSTPIIRGMMDGPFTVSLAHLSDLNEAQNAAASILSMNALQNRVS
MSTLAHQPNCIVNAGSLGVSLGMVSPVSMPFDWHGRIPTSQCNPVLNVVHPGGSHPNLHQ
QQLPSFQQSLLLQNHLSMIHGSQVVAQQSPIKAQPPIAEQPQPSPVALGPPMHPPPPPPP
AGTHPIQQNISCLPERNSSQPISPKEPQGPRQQYYKPQSGGGNQGMEDYPTPPSQHSYAP
AQDGTPKHCRHVPNEHPYLTPSPESPEQWCSPASPHSMSDWSDSTPSPAVVGPSQTKIPH
LPEQVAKMQVFA
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atgtataagtcgggcggagggcagcggggcacggacggcggcatggggcagccccggtgc
ggactctgcctgcagctgctgcaactcgccctcctcacagcgctgatgcagcggggagca
ggcttacagtgttcggaaggttccaatccatgtgagaatggcgggaagtgtaccatgtat
tcgaatggagtgaaggcatgcgtgtgtcgcccgggcttgataggagaccgatgccagttc
caggacccttgtcaccgctcaccctgcttcagtggaggagtctgcacaacctctcttcag
aatggcaccgtgcagtttggctgcacatgccctaggggcttccgaggtcaggactgctcc
ctgattgatgcctgtgccagcaacccttgcgccaacggcgcccgctgtgccaactggaac
agccgctacaactgcacctgcacgctgggctaccagggccggaactgccggaatgacgtg
gacgagtgccggactcccggcatgtgccagaatggtggcacctgcctgaacacccccggc
tccttcaagtgccagtgcgaaagtgggtacaccggacccctctgtgagaatctgtatgtg
ccctgtgccccctcccagtgcctgaatgggggaacctgccgccagactggggacctgaca
tacgagtgcgcctgtctaccaggttttgagggacacaactgcgagatcaacatagacgac
tgcccaggaaacaagtgtgcgaacggaggcacctgtgtggatggtgtcaacacgtacaac
tgccagtgtcccccggaatggacaggtcagttctgcatgacagacgtggatgagtgccag
ctacagccaaacgcttgccacaatggaggcacctgcttcaacgttcttggcggacatacc
tgtatatgcgtgaatggctggacaggcgagagctgcagcgagaacatcgatgactgcgcc
accgctgtctgctttaatggcgccacctgccacgaccgtgtagcctccttctactgcgaa
tgccctatgggaaagactggtctcctttgccatcttgacgatgcatgtgtcagtaaccct
tgccatgaagatgccatgtgcgacaccaacccggtgaacggacgggccatctgcacctgc
cccctaggttttgctggtggcgcctgtgaccaggacgtagatgagtgctcaattggcgcc
aacccgtgcgagcactttggaaagtgtgtgaatacagagggctccttccagtgccagtgc
gggaagggctacaccggcccccgctgcgagtcggatatcaacgaatgcatgtccatgccg
tgccagaacgatgccacctgtctggaccgcattggggagtttacctgcatctgcatgtca
ggtttcacaggcacatactgcgagatcaacgtcaatgaatgtgacagcaatccgtgtgtg
aatggaggcttgtgcaaggacattgtgaatggattcacctgcagctgcccctctgggttt
actggcaacatgtgccagaccgatgtggacgagtgcgctagcaccccctgccagaatggt
gccaagtgtgtggaccgtcccaatgggtacgagtgtcgctgtgcagaaggttttgagggg
cccctctgtgaccagaaccacaatgactgctctccggacccctgccaccacggcacctgc
atagatggcattgctggctacacctgttcctgcgttcctggctacacgggctaccgctgt
gaaaaccagatcgacgaatgccacagcagcccctgccagaatgggggcaaatgcatggac
ctcgtcaacaagtacctctgcaaatgccagcgaggcacctcgggcgtgaactgtgaggtg
aaccatgatgactgcgctagcaacccctgcgactatggcatctgccgggatggtattgac
cgctatgactgtatctgtaagccaggctttaccgggccactgtgcaatgtggagatcaac
gaatgcgcctcaaacccttgcaagaatggcggtacctgtgtggataaggagaacggcttt
acctgcttgtgccctgaagggttccatgacccccactgctattctgaggtggatgagtgt
agcagcaacccttgcgtgcacgggacctgcagggatgacattaacgggtataagtgtgac
tgtgagccaggctggactggccccaactgcgctgtggacaagaacgagtgcgaatccaac
ccctgccagaatggggccacctgttccaacttggtcaatggctaccgttgcagatgcaaa
gacggcttccatgggacctactgccagatcaacgtgaacgattgtctgtccagcccatgc
ctgaatcggggcacctgtgtggatggtatagcaagatacagctgcttatgcaaccttccc
tacacaggtcgcaactgtgagaatgtgttaaccccctgctccccgaacccctgtgagaac
agtggagcctgtgatcacacaccagattatgagagcttcatctgcaactgcgcccctggc
tggcaaggtcagaaatgcagcacagacattaacgagtgtgatctgaacccctgtaagaat
ggcggcacgtgcacgaaccgtcctggcacctatacctgctcctgccgccctggcttcacc
ggtatcaactgcgagacagacctcaatgactgcattcccaatccctgtcgaaatggaggc
acgtgcaaggacctcatcgatgccttccagtgcacctgcatgccgggtttcacgggcacc
cgctgcaccaaagagatcaacgagtgcctgagcagcccctgccgcaacggcgccacttgc
acggactacgtgaatagctatacctgcacctgccaggctggttacacaggcatccactgt
gagaagaacattcaggactgcacagagagctcctgcttcaacggtggcacctgcattgac
agcctagacacctacgtctgccgctgccagcctggtttcaccggcttcaactgccagcac
gagattaatgagtgcgaatcccgaccctgtctgaatggtggtatctgcatagatggcgtg
gagacataccgctgcacctgcccgcagggctacacaggcacccaatgccagaacctgttg
gattggtgcagccagtccccttgccagaacgggggtcgctgccatcagacaggtgccact
ttcaaatgtgagtgccctgggggctggaccgggtcctactgcgacatccctagcgtgtcc
tgtgagactgcagctgctcagagaagggtgagggtggaccagctgtgccgctttgggggc
tcctgcatcagcgtcggcaacacacacaaatgtatctgcaaaggtagctacacaggcagc
tactgtgagacggaggtgaaccattgtgagctgaacatgtgccgaaacggtgccacctgc
cgcggctatgtgggtggctacttgtgtgagtgtccgccaggcttcgagggcaagaactgt
gaaaatgacatcaatgagtgccaatcccagccctgccagaatggtggcacatgtgttgac
ctgatcgggcgctacatgtgttcctgcccaccgggaacgctgggagtcctatgtgaaatt
aatgaagacgattgcaccacaacccccggcaaccgggcccccaagtgcttgaacaacggg
acatgtgtggacaaggtgggaggctatcggtgcacctgcccgccagggtacactggagag
cgctgtgagggggacgtgaacgagtgctccccaaacccgtgtgacccccagaactctcag
gactgtgtgcagctctctaatgacttccactgcgtgtgcaagtcgggatttacaggtcgc
cagtgtctgagcatcatcaacacttgtgaatcacagccatgtcagaacaacggggagtgc
aaggtggcagtgaacacacccttgggctatgcttgcaggtgtctttcgaattattttggc
ccaaactgtgagcgaaatgccttgtcctgcagggagctgatgtgccacaatggtggttcc
tgccgccaaactcctttgggcgcccactgcacctgcccgtcagggtttctgggctctgac
tgccgcctccattccaatggcagctgtgcttctgcgccctgttaccatggtgccacctgt
cgggagacccagcgcttcccctacttccagtgctcgtgccaccgggccttcacaggtggc
cgctgtgagcgcttcatccgccccacgcctttaccgttgcctcccgaagcacctcatcac
tgcttacgggaggattgcaggaccaaggcaggtgaccgttactgtgaccgtgaatgcaat
gttccggcctgccagtgggatggtggggattgctccttgactgtggatgacccctggaag
aagtgtgaggcgctgcagtgttggcgtttcttcaacaacagccgctgtgatgaggcctgc
aacactcctgagtgcctgtacgacaactttgactgcaagagccaagagaagagctgcaac
cctgtgtacgagaaatattgcacggatcacttccaggatggacggtgcgaccagggctgt
aacaatgaggagtgtggatgggatggcctggattgtgctggcgaggtgccggagcatttg
gcaaagggggtgctggtgctggtggtgctgctgccccctgaagagttgctgcggacgggt
gcagcctttttacagaagctgagtgctatcttgcacacttccgtgcgctttcgcattgac
aaggaaggcaactacatgatatacccctattatcgtcccacctcaaggttgcagaaacgg
gagctggacaaagaggtcattggatccacggttaacctggagattgacaaccgcctgtgc
tttcaggcctcggacaaatgcttccctgatgctgaaagtgcagcagattacctggcagca
ctgtctgccgtggagaggctggaattcccctatcccattagagaagtccgtggtgagcct
tttgaaccggacaccacaaacgtgctgcccgtggtggtggtggtggcggcagtcattctg
ctcgtcatcttggttttgggcgtgctggtagttcgtcggaagcgtgagaacagccacctc
tggttccctgaagggttcaccctgaagaaggcaagcagcaagaagagtcgccgggagcct
ctgggtcaggactcacttgggatgaagagtatatccaagggtgaaagtctgattggtgat
cattctgaggactggctggatacagactgccccgaggccaaaagactcaaggtggaagaa
cacggcgtatcagatagtgaagaccctgtggattgtcgccagtggacccagcatcacctt
gctgcagctgatatccgaatgcccccatccatggcactgacccctccacaaggggagttt
gatacggatgggatggatgtaaatgtccgtggccccgatggtttcaccccactgatgctg
gcttctttctgtggtggaggcatggagctggatgtgaatgaagatgacgaggccgaggac
tcctctgccagcatcatatccgatctcatctgccagggcgccaacctcggggcacagacg
gaccgtacgggggagacggcgctgcacctggctgcccgctatgcccgtgctgacgcagct
aaacgcctactggatgccggagctgacacaaatgcgcaggacaacacggggcgtagcccg
ttgcatgcagctgtagctgccgatgcacagggtgtcttccagattctgatccggaaccgc
tccacagacttggatgcccgcatgctggatggctccacagcactgatcctggctgctcgg
ctagcggtagagggcatggtggaggaactgattgcctgccacgcggacgtgaatgctgtg
gatgagctggggaaatcagccttgcactgggcggcagcggtgaacaacatcgaagccacg
cttgcgctgctcaagaacggagcgaacaaggacatgcaggacagcaaggaggagacaccg
ctcttcctggctgccagagaaggaagctacgaagcagccaaaatcttactggatcacttt
gctaacagggagatcacggaccacatggaccggctgccacgggacattgctcaggagcgc
atgcaccatgatattgtgcagttgcttgacgaatacaacactgtcaggagcccccaaggg
cctgggaattctattgggggccacaccctctcccctctcatgtgtcctcccaatggcttc
atgtccaacctgaagcagacgccgcaaggcaagaagaatcggcggcctggtgccaagaat
ggtgcgacaggcagcacggccagcctcgctagggagaccaaggaaagcaagggacgcagc
aagaagctggcactggattgccagggatctttgattgagagttcggttaccctctcacct
gttgactcgctggattctcctcggagtgcctatgtgaccaaccctacctcccccatcatg
acatcaccaggagtctttcaccctgctgctccatctatgtctgtgccctccacgcccatc
attcgtggcatgatggacgggccctttactgtgtcgctggcccatctaagcgatttgaac
gaggcccagaacgcagctgcctccattctgtcaatgaatgctctgcaaaaccgcgtctcc
atgtccaccctcgcccaccagcccaactgcattgtcaacgcaggcagcctgggggtgagc
ctgggcatggtcagcccagtcagtatgccctttgactggcacggcaggatccccacatcc
cagtgcaatccagtgctgaatgtggtacacccagggggctcccatcccaacctccatcag
cagcagcttcccagtttccagcagagtttgttgcttcaaaaccacctctccatgattcac
ggatcccaagtagtggctcagcagagtcccatcaaggcacagccaccaatagcagagcag
cctcagccttcgcctgtggcactgggcccacccatgcacccgcctccacctcccccgcct
gccggcacacaccccatccagcaaaacatcagttgcctaccagagagaaacagcagtcag
cccatctcacccaaggagccacaaggaccccgacagcagtactacaagccacagagtggt
ggtggtaaccagggaatggaagattatcccacacccccttctcagcacagctatgcacca
gcgcaagatggcactcccaaacactgtcggcatgtgcctaatgaacatccatacctgacc
ccttccccagagtccccagagcagtggtgcagcccagcctcaccccattccatgtcagac
tggtcagattccacccctagtccagctgtggtgggaccctcgcagacgaagattccacat
ctgccagagcaggttgccaaaatgcaggtctttgcatga
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integrated database retrieval system
