Geotrypetes seraphini (Gaboon caecilian): 117350020
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Entry
117350020 CDS
T09159
Symbol
CXXC1
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117350020 (CXXC1)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117350020 (CXXC1)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
117350020 (CXXC1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
117350020 (CXXC1)
COMPASS/SET1 complex (yeast)
117350020 (CXXC1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
117350020
NCBI-ProteinID:
XP_033779787
UniProt:
A0A6P8NTU0
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Position
1:465746670..465827331
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AA seq
587 aa
AA seq
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MERRRQEDSEFSDPDFPATGEMKSENGENAPVYCICRKPDINCFMIGCDNCNEWFHGYCI
SITEKMAKAIREWYCLQCREKDPSLEIKYRHKKSREREREAEKERTEREERLNRMPEMKN
DRKKGSIPKQQIKRSARMCGECESCSRTEDCGQCDFCRDMKKFGGPNKIRQKCRLRQCQV
RARKMLRVRDDELQVYKDQADSVTLADSLSDDDLPPIDPDFYQEFCSGAFDDQNLPWLSD
PDDTPFLDPVLRKRAVKVKHVKRREKKSEKKKEEKYRRHKQKQKHREKSRHSERVESRDM
TSSRQCLGPSCVQSARAASKYCSDDCGMKLAANRIYEILPQRIQQWQQSPCVAEEHGKKL
LERIRREQQQARTRLQEMERRFHELEAIIARAKQSVVREDEETNEGDSDDTDFQIFCVSC
GHPINPKVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLC
PEHSRDPKMPADEVCGCPLVKDVFELTGEFCRVSKRKCNRHYCWEKLRRAEVDLERVRVW
YKLDELFEQERNVRMAMTNRAGLLALMLHQTIQHDPVTTDLRSHMDR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagaaggcaagaggacagtgaattttcagaccccgatttcccagctactggg
gaaatgaagtcagagaacggtgagaatgccccagtatattgcatctgccgcaagccagac
atcaattgctttatgattggctgtgataattgcaatgagtggttccatggctactgcatc
agcattacagaaaagatggctaaggctatccgggagtggtactgcttacagtgtcgagaa
aaggatccaagcctggagataaagtaccgacacaagaagtcaagggagagagagcgggag
gctgaaaaagaaaggacagagagggaagagagactgaatcgcatgccagagatgaagaat
gaccgcaagaaaggatcaattcccaagcaacaaatcaaacggtcagcacgcatgtgtggt
gagtgtgagtcctgcagccgcactgaagactgtggtcagtgtgatttctgccgtgacatg
aaaaagtttggagggcccaataagatccgacagaaatgtcgactgaggcagtgccaggtt
cgagctcggaaaatgctgcgtgtccgtgatgatgagctgcaggtgtacaaggaccaagca
gactctgtgaccctggctgactcgctgtcagatgatgatctgccgcctattgacccagac
ttctaccaggaattctgttcaggggcctttgatgatcagaacctgccttggttgagtgac
ccagatgacacacccttccttgatcctgtgctacgtaagcgagccgtaaaggtcaaacac
gtcaagaggcgggagaagaagtctgagaaaaagaaagaggagaaatacaggcgacacaag
caaaagcagaaacaccgagagaaaagccggcactcagagcgagtggaaagtagagacatg
acctcatctcgccagtgcctggggcccagttgtgtccagtccgcccgtgccgcttccaag
tattgctccgatgactgtggcatgaaactagcggccaaccgcatctatgagattctgcca
cagcgcatccagcagtggcaacagagcccatgtgtggcagaagagcatggcaagaagctt
ttggaacgcatccggcgggagcagcagcaggcccgcaccagactgcaggaaatggagcgg
cgcttccatgagttggaagctatcattgcccgtgccaaacaaagtgttgtgcgggaggat
gaagagaccaatgaaggagacagtgatgacacagacttccagattttctgtgtatcctgt
ggccatcccattaatcccaaggtggcgctgcgtcacatggagcgctgctatgctaagtat
gagagccagacgtcttttggatctatgtacccaaccagaattgaaggagctacccggtta
ttctgtgatgtctacaatccccagagcaagacctactgcaagcgattgcaggtcctatgt
ccagagcactcacgggaccccaagatgccagcagatgaagtttgtggctgccctctagtg
aaagatgtttttgagttgacgggtgaattttgccgtgtgtccaaacggaagtgcaaccgc
cactactgctgggagaagctacgccgagctgaggtggacctagagcgcgtcagagtgtgg
tataagctggatgagctctttgagcaggaacggaatgtacgcatggctatgacaaacaga
gctgggctcctggcactaatgctgcatcagaccatccagcatgatcctgtcactactgac
ctacgctcccacatggatcgctga
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