Geotrypetes seraphini (Gaboon caecilian): 117350028
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Entry
117350028 CDS
T09159
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117350028 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117350028 (TAF6)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117350028 (TAF6)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117350028 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
117350028 (TAF6)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117350028 (TAF6)
STAGA complex
117350028 (TAF6)
TFTC complex
117350028 (TAF6)
SAGA complex
117350028 (TAF6)
SLIK complex
117350028 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
CBFD_NFYB_HMF
Histone
TFIID-18kDa
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
117350028
NCBI-ProteinID:
XP_033779801
UniProt:
A0A6P8PX62
LinkDB
All DBs
Position
16:complement(20868569..20888516)
Genome browser
AA seq
667 aa
AA seq
DB search
MAEEKKLKLTNTLLPTESMKVIAESMGISQMPEETCQLMTEEVSYRIKEITQEALKFMHV
GKRQKLTVNDIDSALKLKNVEPLYGFHTQEFIPFRYASGGGRELYFYDEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGVQPAIPENPPPASKEQQKMEATEPLKAVKPGQEDNGPLKG
KGKEKKVPVLEAGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPG
LYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVMTC
IVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFSKCWVDDKTPWT
TRYGSIAGLAELGPDVIKTLIVPRLQAEGERIRSVLDGPIVSNIDKIGADHVQSLLLKHC
APVLAKIRSPPDNQDAFRADYGYLGPLLCTNAVKARAQAAMQAQQVNRTTLTITQPRPTL
TLSQAAPSQSISRPPSIIKVPSTLTLPVQTLVSARPSTPTQPSPPPTKFIVMSSTSATNS
SQQVITLNTTPAATTSTSPVTTTVPSIQPIVKLVSTAQTVTSSTATGSVQKYIVVSLPSA
SEGKTQSTQGALQQLSPSASTGLAISGLPSVKQERPDSPQPFLSAVGGMFSKTNGSQGVP
ESPQPSQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaagaagctgaaactgactaacacgctcctccccacagaatctatgaaa
gtcattgctgagtctatgggtatttcccagatgcctgaggagacctgccaattgatgaca
gaggaagtcagctacaggatcaaggaaattacacaggaggctctgaagtttatgcatgtg
ggaaagcgacagaagttgactgtgaatgatatcgattctgccttgaaactgaaaaatgta
gagcctctctatgggttccatactcaagagttcattccctttcgctatgctagcggtgga
gggcgagagctgtatttctatgatgagaaggaagtggatctcagtgatatcattaacacc
cctctgccacgtgtacctctggatgtgtgcctgaaagcccattggctgagcattgaagga
gtccaacctgcaattcctgaaaatccacctcctgcatccaaagagcagcagaagatggaa
gccactgaaccgctcaaggctgtgaaacctggacaagaggacaacggaccgctgaagggc
aaagggaaggagaagaaggtgccagtgctggaggcagggcctctgcggctgaagccacgt
agtatccatgagttgtcggtagagcagcagttatattacaaggaaataactgaggcctgt
gtgggatcctgtgaagcaaagcgtgcggaggctctccagagcatcgctactgatcctggg
ctgtaccagatgctgcctagattcagcaccttcatatctgagggggtgcgcgtgaatgtc
gtgcagaataacttggcactgctaatttatctgatgcggatggtaaaagctctgatggat
aatcccaccctttatctggagaaatacctgcacgagctgattcccgcagtgatgacctgc
attgttagccggcagctgtgcctgcgtccagatgtggataatcactgggccttgagagac
tttgcagcccggctcattgctcagatctgcaagaactttagtaccactaccaataatata
cagtcccgcatcaccaagaccttctccaagtgctgggtggatgataaaactccatggaca
actcgctacggatccatcgcaggacttgcagagcttggacctgatgtgattaagactctg
attgtgccaaggctgcaggcggaaggagagcggattcgcagtgttcttgacggtcccatt
gtcagtaacattgataaaataggagctgaccatgtacagagtttgctgcttaagcactgt
gctccagttttggccaaaatcaggtctcccccagataaccaagatgcatttagagcagac
tatgggtacctgggaccattgctctgcaccaatgcagtgaaagcacgagcacaagcagct
atgcaagcccaacaagtgaaccgcaccacgctcacaatcacccagccacgtcctaccctc
acattgtctcaggctgccccgtcacaaagcatctcccgccccccaagtataatcaaggtc
ccaagtaccctcacactgcctgttcagacgctggtatctgcgcgtccctccacaccgacc
cagccatccccaccacccacaaagttcattgtcatgtcttctacttctgccactaacagc
tctcagcaggtgattaccctgaatacaacccctgcagcaaccacctccacctctcctgtc
accactaccgttcccagcatccaacccatcgtcaaactggtctccacagctcagacagtt
accagcagcacagcaacaggcagcgtgcagaagtatattgtcgtgtcattgccatccgca
agtgagggcaagacgcagtcgacccagggagcccttcagcagctttcaccctcagccagt
actggcttggctatctcagggttgccttcggtaaagcaggaacgcccggacagtccccag
ccctttttgtctgctgttggtgggatgttcagcaaaaccaatggatctcaaggggtgccg
gaatctccccagccttcacaatga
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