Geotrypetes seraphini (Gaboon caecilian): 117350054
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Entry
117350054 CDS
T09159
Symbol
RNF115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117350054 (RNF115)
04121 Ubiquitin system [BR:
gsh04121
]
117350054 (RNF115)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117350054 (RNF115)
Membrane trafficking [BR:
gsh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117350054 (RNF115)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117350054 (RNF115)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
C1_2
HypA
FAR1_N
zf-Nse
Pcf11_C
DUF7560
zf-HC5HC2H
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
117350054
NCBI-ProteinID:
XP_033779866
UniProt:
A0A6P8PXB8
LinkDB
All DBs
Position
16:complement(40218368..40248261)
Genome browser
AA seq
302 aa
AA seq
DB search
MAEAAAAAAAAAVSQQRFFCHCCKGKVSPKLPEYICPRCESGFIEEVTDDSSFLDGGSGV
DDNTSAQFAELWDHLDHTMFFPDFRPFLNSNSLDLDSRDNERGHQAHADLWGPTRPPRLP
MTRRYRSRGSSRPDRSPAIEGLLQQIFAGFFANSAMPGSPHPFSWSTMLHSNPGDYAWGQ
SGLDAIVTQLLGQLENTGPPPADKDKIMSLPTVTVTQEQVDMGLECPVCKEEYMVTEQVR
QLPCSHFFHSDCIVPWLELHDTCPVCRKSLNGEDSSQQPRNPEAMASHNFSTNSPLPDRW
TF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcggcagcggcggcggcggcggccgtgtcccagcagcgcttcttctgc
cactgctgtaaagggaaggtcagccccaagctgccggaatacatttgtcccaggtgtgaa
tcgggcttcattgaagaagtgacagatgattccagtttcctagatggtggcagcggagtc
gatgacaacacgtcggcgcagtttgccgagctctgggaccacttggaccacacgatgttc
ttccctgattttagacccttcctgaacagtaattccctggatctggacagccgagacaac
gaaagggggcaccaagctcatgcagacctctgggggcctactaggcccccgcggcttccc
atgacgcggaggtatcgatctcgaggtagctcccgtcctgatcgttctcctgccattgaa
ggcctactccagcagatttttgcagggttttttgccaactctgcaatgcctggatcccca
cacccattttcctggagcactatgctgcactccaaccctggggactatgcgtggggacag
agcggtctggatgcgattgtaacccagcttttgggacaattggagaacactggccctccc
ccagcagacaaggataagattatgtctcttcccacagtgacagtaacgcaggagcaagtt
gatatggggctagagtgtcctgtttgtaaagaggaatacatggtgacggagcaggttcga
cagctgccctgcagtcacttcttccacagtgactgtattgtgccctggttagaactgcat
gacacgtgtccagtatgtaggaagagtttaaatggggaagattccagccagcaaccgagg
aatccagaggccatggcaagtcacaactttagcaccaacagcccactcccggatcgatgg
actttctga
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integrated database retrieval system
