Geotrypetes seraphini (Gaboon caecilian): 117350059
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Entry
117350059 CDS
T09159
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117350059 (VPS52)
Membrane trafficking [BR:
gsh04131
]
Protein recycling
Others
EARP complex
117350059 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
117350059 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF4795
COG6_N
CoV_NSP7
Motif
Other DBs
NCBI-GeneID:
117350059
NCBI-ProteinID:
XP_033779875
UniProt:
A0A6P8PFC2
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All DBs
Position
16:54316675..54334904
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AA seq
710 aa
AA seq
DB search
MAASVLPFPGVEEEEAVGDGGEQALNLNLGDLDLTSDEFILDEVDIHIQANLEDELVKEA
LKTGVDLRQYSKQVEMELLQIEHASIKDYIKESQNITSLHNQITACDAILERMEQMLSTF
QCDLSSISSEIQTLQEQSIAMNIKLKNRQSVRSELSQLVDELVVPSTMISVILETAVTEQ
SFLEQLHELNNKINYVKEQSFRETMACADVQDTLDRLKIKAVTKIREFILQKIYSFRKPM
TNYQIPQNALLKFRFFYQFLLANERSVAKEIRDEYVDTMSKIYLSYFKSYTSRLMKVQYK
EVAEKDDLMGVEDTAKKGFFSKPSLKNRNTVFTVGNRANIITSAELEAPIIVPHTAQKSD
VRYPFESLFRSQHYALLDNSCREYLFICDFFMVTGNSAQDLFNSIMGKSLTMFLKHMDTY
VSDCYDSIAIFLCIHIILRFKTIMTKRTIPAVDKYWDTLLEMLWPRFELILELNIQSIRN
TDPQKLGFLDTRPHYITRRYAEFSSAIVSINQTYPNEKTNALLGQLQVEVENFVLRVAAE
FSSRKEQLIFLINNYDMMLSVLTERAVDDSKEVEIFQQLLTARTQEFIEEILSPPFGGMI
AFVKESESLIEKGQLERLKNEEGRVTQLVRGFAGTWKQSVENLSHDVMRSFTNFKNGTSI
IQGALTQLIQYYHRFHKVLSQAPFKHLPVRSELINIHHLMVEVKKHKPNF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcggtgctgccgttcccgggagtagaagaagaagaggcagttggtgatggg
ggagagcaggcattgaatctaaatctgggtgatctggaccttacctcagatgagtttatc
ttggatgaagtggacattcacatacaggcaaatttggaagatgaactggtgaaagaggcc
ttgaaaacgggtgtggatctccggcagtattcaaagcaggtggagatggagctactgcag
attgagcacgcatccatcaaggactatattaaagagagtcagaatatcacctccttgcac
aaccaaatcacggcatgtgatgctatccttgagcgaatggaacagatgcttagcactttt
caatgtgacctcagcagcatcagttccgagattcagaccctgcaggagcagtctatcgcc
atgaacattaaactgaagaaccgtcaatcagtgcgtagtgaactcagccagctggtggat
gagctggttgtacccagtaccatgatcagcgtgatcctggagacagcagtgacggagcag
agctttttggagcagttacatgaattgaataataaaatcaattatgtgaaggagcagtct
ttcagggagaccatggcttgtgctgatgtgcaggacaccctggaccggctgaaaatcaag
gcagtaacaaagatcagagagtttatcctacagaaaatctactctttccggaagccaatg
actaactatcagatcccccagaatgcactgctcaagttcaggtttttctaccagttcttg
ttggcaaatgaacggtcggtggcaaaagaaatccgtgatgagtatgtagacaccatgagc
aagatctacctctcctatttcaagtcttataccagccgcttgatgaaagtgcagtataaa
gaagtggctgaaaaggatgacttgatgggagtagaagacacagcaaaaaaaggtttcttc
tctaaaccctcactgaagaaccgcaacactgtttttacagtggggaatcgtgcaaatatc
ataacatcagcagagctggaggcgccaatcattgtcccacacacagcacagaagagcgat
gtcaggtacccttttgagtctctcttccgcagccagcactacgctctcctggacaacagt
tgcagagagtatctcttcatttgtgacttcttcatggtgactggcaattcggctcaggat
ctcttcaatagcatcatggggaaatcgctcactatgtttctgaaacacatggacacttac
gtctcggactgctatgacagcatcgctatcttcttgtgtattcatatcatcctccgcttc
aagaccatcatgaccaagcggactatccctgcagtggacaagtattgggacacgctgctc
gagatgctgtggccaaggtttgaattgatcctagaacttaacatccagagcattcgaaac
acggacccccaaaaactgggattcctggacacccgtccacactacatcacaaggcgctat
gcagagttctcgtccgctattgtaagcattaaccagacctatcctaatgagaagacaaac
gctctgctgggacagctacaggtagaagtggagaattttgtgctaagagtggccgcagaa
ttttcttctcggaaggagcagcttatcttcctcatcaacaattatgacatgatgctgagc
gtcctgacagaacgagctgtggatgatagcaaagaggtagagatcttccagcagctgctg
acagctcgcactcaggagtttatcgaggagattctgtcacctccctttggaggtatgatt
gcatttgtgaaagagtcagaatcgctgatagagaagggacagctggagaggttgaagaat
gaggaaggacgtgtcactcagcttgtgcgtggatttgctggtacctggaagcagtcagta
gaaaacctgagccacgatgtaatgcgatcctttaccaacttcaagaacggcacaagcatt
atccagggggcgctgactcagctcattcaatactatcaccgttttcataaggtgctgtcc
caggcacctttcaaacacttaccagtgcgctctgaactcatcaacattcatcacctcatg
gtggaagtgaagaaacacaagcctaacttctaa
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