Geotrypetes seraphini (Gaboon caecilian): 117350128
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Entry
117350128 CDS
T09159
Symbol
SNX27
Name
(RefSeq) sorting nexin-27
KO
K17936
sorting nexin-27
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117350128 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117350128 (SNX27)
Membrane trafficking [BR:
gsh04131
]
Protein recycling
Others
Others
117350128 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117350128 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
SNX17-31_F2_FERM
USP7_C2
VCPO_N
VirE3
DarA_N
Dickkopf_N
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
117350128
NCBI-ProteinID:
XP_033780043
UniProt:
A0A6P8P8H1
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All DBs
Position
16:25325549..25372652
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AA seq
594 aa
AA seq
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MSRAPPTRTSSPGVPRGGGGGGGARPSVRPVTFPPRRGGPVRGKMADEDGEGVVSADRSG
GGGSGPCVAVSGPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPAG
AADRAGIRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVPPHEADNLDPSDD
SSGQSFYDYTEKQAVPISVPTYKHVEQNSEKFVVYSVYMAGRQLCSKRYREFAILHQNLK
REFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFLSESDEN
YNGVSDVELRVALPDKKTVTIRVKKNSTTDQVYQAVAAKVGMDVITANYFALFEVINHSC
VRKLAPNEFPHKVYVQNYTSAVPGTCLTVRKWLFTTEEETLLNDNNLALTYFFHQAVDDV
KKGYIKAEEKSYQLQKLAEQKKMVMYLNMLRTCEGYNEIIFPHCSCDARRKGHVITAVSI
KHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFN
YMHECFERVFCELKWRKEIEEEATDKDNKNCRNDHMCSKNIFQLVRSQQRDTTA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcgctcctccgacgcgcacttcgtctcccggcgtgccccgcggtggtggtggt
ggtggcggcgcgcgcccgtccgtccgtcccgtgacgttcccgccccgcagggggggccct
gtgcggggaaagatggcggacgaggacggggagggggtggtgtccgctgacagaagcggc
ggcgggggttcggggccgtgcgtggccgtcagcgggccccgcgtcgtgcgcatcgtcaag
tccgagtcgggctacggcttcaacgtgcgcggccaagtgagcgagggcggccaactgcgg
agcatcaacggcgagctctacgcgcccctgcagcacgtcagcgccgtcctgcccgccgga
gccgccgaccgcgccggcatccgcaagggggaccgcatcctggaggtgaatggtgtgaat
gtggaaggagccacacacaagcaagtggtggatctgatccgagctggggagaaggagtta
attctgactgtgttatcagttccaccacatgaagctgataaccttgatcccagcgatgac
tcctcaggacagtccttctacgattatacagaaaagcaagctgtccctatctctgtccct
acctacaaacatgtcgagcagaactcagagaaatttgtggtgtacagtgtttacatggct
ggcagacagctctgctccaagcgctaccgggagtttgccatcttgcatcagaacctaaag
cgtgaatttgccaacttcacattccctcgtctgccaggaaaatggcccttttccctgtcg
gagcagcagctggatgccaggcggaggggactggaagagtacctggagaaagtgtgttcg
ataagagtaattggggagagcgatatcatgcaggaattcctttcagagtcagatgagaat
tacaatggtgtttctgatgtggaactccgagtagcattacctgataaaaagacagttact
atccgggtgaaaaagaacagcactacagaccaagtgtatcaggctgtggcggctaaagtt
ggaatggatgtcatcactgcaaattactttgccttatttgaagtgattaatcactcctgt
gtacgtaagctggccccaaatgagttccctcataaagtgtatgtacagaattacacatca
gcggtgcctgggacctgcctcactgtccgcaagtggctcttcactactgaggaagagacg
ctgctcaatgacaacaaccttgcgctaacctacttcttccatcaggctgtggacgatgtg
aagaaaggttacatcaaagcagaggaaaagtcatatcagctgcagaaactggcggagcag
aagaagatggtcatgtatttaaatatgctgcggacctgtgaaggctacaatgagataatt
ttcccccactgctcctgtgacgcacgacgaaagggccatgtgatcacagctgtcagtatc
aagcactttaaactccatgcctgcacagaggaaggacagctggagaaccaggtgatagcc
tttgagtgggatgaaatgcaacgatgggacacggatgaggagggcatggccttctgcttt
gagtacgctcgaggagagaagaaaccacgctgggtgaaaatcttcactccttatttcaac
tacatgcatgagtgctttgagagggtgttctgtgagctgaagtggaggaaagagatagaa
gaggaagcaacagacaaggataacaagaactgcaggaatgaccatatgtgcagcaagaac
atctttcaattggtgagatcgcagcagcgggacaccacagcctag
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