Geotrypetes seraphini (Gaboon caecilian): 117350134
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Entry
117350134 CDS
T09159
Name
(RefSeq) LIM homeobox transcription factor 1-beta-like
KO
K09371
LIM homeobox transcription factor 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117350134
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
117350134
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
HTH_32
Motif
Other DBs
NCBI-GeneID:
117350134
NCBI-ProteinID:
XP_033780053
UniProt:
A0A6P8PZ42
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All DBs
Position
16:48145870..48186993
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AA seq
384 aa
AA seq
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MKTEETHSCLQQAPAILGFGSDTKLREMCAGCEEPICDRFLLRVNERSWHEDCVKCAACL
QPLVGTCYSRERQLYCRQDYEKLFATKCSSCQQAIAPSELIMRVLGHVYHVACFRCCACE
RQLQRGDEFVLKEGQLLCRGDYEKEKEMLSAISPTPTQSVKSEDEDGSHSHGKGGEEGKE
HRRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMK
KIARRQQQQQQQDPDQLGSQRLGSGRGASRSSRQSNEDSEDSGSVQGLEALMVPYARLPQ
QQLLTLDQNGYGPDLYRQGLTPPQLPGDHLHPYDSEGVFHDMDGDAVAHLGDCLLSTAEA
GLLQARAGNPIDRLYSMQTSYFTS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagaagagacccactcctgtttgcagcaggctcctgcaatcctgggattcggg
tcagacaccaaactgcgagagatgtgcgcaggctgcgaggagcccatctgtgaccgcttc
ctactgcgggtgaacgagaggagttggcacgaggattgtgtaaagtgcgcagcctgtctt
cagccactggtggggacctgctacagccgggagcgtcagctgtactgcagacaggactac
gaaaagctcttcgccaccaagtgcagcagctgccagcaggcaatcgccccgtcggagctc
ataatgcgggtgctgggccatgtctaccacgtggcctgctttcgctgctgcgcctgtgaa
cgccagctgcagcggggagatgagtttgtgttgaaggaggggcagctgctctgtcgtggc
gactacgagaaggaaaaagagatgctcagcgccatcagccccacccccacccagtccgtg
aagagtgaggatgaggatgggagccactcccacggcaaagggggcgaggaaggcaaggaa
cacaggaggtccaaacgcccacgcacgattctgaccacacagcaacgtcgggccttcaaa
gcctccttcgaggtgtcatccaagccctgccggaaggtgagagagacactggcagcagag
acaggcctcactgtccgtgttgtgcaagtttggttccagaatcagagagccaagatgaaa
aagattgcacgtcggcagcaacagcagcagcaacaggatccggaccagctggggagccaa
cgtctgggctcgggccggggagccagccgcagcagcagacagagtaacgaggacagtgag
gacagtggcagcgtacaaggactagaggctctgatggtcccatacgcccggctcccccag
cagcaactcctaaccctggatcagaacggttatggcccggatctctataggcaaggcctc
accccaccccagctcccaggggaccatttgcacccgtacgactctgagggcgttttccac
gacatggacggagacgctgtggcccacctcggcgactgcctgctctcaaccgccgaggct
ggcctcctccaggccagggcgggcaaccccatcgatcggctgtactccatgcagacgtcc
tatttcacatcctga
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