Geotrypetes seraphini (Gaboon caecilian): 117350193
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Entry
117350193 CDS
T09159
Symbol
FDPS
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00900
Terpenoid backbone biosynthesis
gsh01100
Metabolic pathways
Module
gsh_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117350193 (FDPS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gsh01006
]
117350193 (FDPS)
Enzymes [BR:
gsh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
117350193 (FDPS)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
117350193 (FDPS)
Prenyltransferases [BR:
gsh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
117350193 (FDPS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF2700
Motif
Other DBs
NCBI-GeneID:
117350193
NCBI-ProteinID:
XP_033780174
UniProt:
A0A6P8P8U1
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All DBs
Position
16:37539287..37547041
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AA seq
408 aa
AA seq
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MPSQAHRELLPLAWSHKKKSLFLLTQGWQKMSPLIWAGKRLYCSENHLWPMKEFLRMSGS
WKEQSVADRQEFIKYFQQIVRDLTEDGLQHPEVGDAIARLKEVLEYNAPGGKYNRGIAVV
SSLRELMGPEAQKVENFQRALAVGWCIELLQAFFLVADDIMDYSEIRRGHPCWYKKEGVG
LDAVNDSFLLEASIYRLLKKYCRGQPYYLSLLELFLQTSYQTELGQALDLITARPEKVEL
SRFTEQRYKVIVKYKTAFYSFYLPVAAAMYMAGIDSDKDHENARTILLEMGEFFQIQDDF
LDCFGDPSVMGKIGSDIQDNKCSWLVVQALKLVSPEQRQILEENYGQHDPARVAKIKQLY
EELGLPAVYQRYEDESYQRLQSLITRHANSLSKDIFVSLAQKIYKRQK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccatcccaggcccatcgggagttgctgccgcttgcctggtctcacaaaaagaagtcg
ctgtttctgctgacccagggctggcaaaagatgtcaccactgatctgggctgggaagaga
ctttactgctctgagaaccatctctggccaatgaaagagtttctgaggatgagcggcagc
tggaaagagcagtctgtagccgacaggcaggagtttatcaaatacttccagcagattgtt
cgggatctcacagaggatgggctccagcaccccgaggtgggagacgccattgcacggttg
aaagaggtgctggaatacaatgccccggggggcaaatataatcgaggcatcgctgttgtc
agctccttgcgggagttgatgggacctgaggcacagaaagtggaaaacttccagcgtgct
ttggctgtgggctggtgcattgagctgcttcaagccttcttcctggtggctgatgacatc
atggattattcggagattcggcgaggccacccttgctggtataagaaggaaggtgtgggg
ctggatgcagttaacgattctttcttgctggaggcctctatctaccgtctgctgaagaaa
tactgccgtgggcagccctattatctcagtctcctggaactctttctccagacttcctac
cagacggaacttggccaggcactagatctcattacagctcgacctgaaaaggttgagttg
agccgattcaccgagcagaggtacaaagtgattgtgaaatacaagactgccttctactca
ttctacctgcctgtggctgctgccatgtacatggctggtattgacagcgacaaggatcat
gagaatgccaggacaatcttgctggagatgggggagttcttccagatccaggatgatttc
cttgactgctttggtgaccccagtgtgatgggcaagataggctctgatattcaggataat
aaatgcagctggctggtggtgcaggcgctgaagctcgtgtcccctgagcagagacagatt
ctagaggagaactacggccagcatgacccagccagggtggcaaaaataaagcagctgtat
gaggaactgggcctgccggctgtctaccagcggtacgaggacgaaagctaccagcggctg
cagtcgctgattacccgccatgccaacagcctgtccaaggacatctttgtcagcctagcc
caaaaaatctacaagcggcagaaatga
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