Geotrypetes seraphini (Gaboon caecilian): 117350240
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Entry
117350240 CDS
T09159
Symbol
SYDE1
Name
(RefSeq) rho GTPase-activating protein SYDE1 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117350240 (SYDE1)
Membrane trafficking [BR:
gsh04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117350240 (SYDE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
117350240
NCBI-ProteinID:
XP_033780284
UniProt:
A0A6P8P946
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Position
16:complement(52462778..52511187)
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AA seq
1030 aa
AA seq
DB search
MAEPLLRKTFSRLRGKEKLKRKKSEQKDRDRPSKASETVPASSDLKPLQAAPQDSEEVCK
KGPNITVSRKQNWAKVSSSARDDWIAFSRKLRSGSHTSTEQSDRPGKQSTLPSRQLSDVG
KEADQKPSKATSLFRSRSCPQRANRDHMYSSGTHHLQQEEVQVSEKNSRLDFLAPSVDKS
QSRLDSTEICATSSVVKCSSYGAYLQSLDRSSREWVLSSGKVPGFEESLRFPLSCLGELK
ESNIVDDEGDIWYNPIPEDEDQACVLDKNDPWKRRNMRYTEIFEPSAGDSRTLPNATDPL
KKTSNSVGTSGIPWTLNGGTESSCDKAAVNSQVVLSEASYSTTPAEGDGSQKAEASGSCM
QKSTGISHTDLKVPSESCGKGKSPGTVRRLSMKMKKLPELRRKLSLRSTRASRQDQSGGS
SPQNLHKESGNIISRYHLDTSVSSKESLWKSRTRHKSKSTIKGGYLSDGDSPELIVKTEK
CSANGQEKEPLDSQGGAGAKLDSAAFRPYNVSEHPRCVQHLSGLVNVHLYGLQDAKSPKV
DSKDIFCALQVDGVNRAHTALLPCRAAFLTLNHTFNLELESSRFLKLVVFSWDPSTCKNR
VCCYGTICLPQIFKGSRCQQLAVKLEPRGFLYTKLTLVEQWQAPPAATAAGTRLEPRVFG
VELRQLVEREDSAVRVPLLIQKCVSEIEKRGLKVVGLYRLCGSAAVKKELRDAFERDSSA
VALSEELYPDINVVTGILKDYLRELPTPLITKTLYEVVLEAMSRRPPRRRVDGQEPACSS
EEESVSLLNCLPEIEKATLTTLLDHLSLVSSYHEYNRMTSQNIAVCFGPVLLNQNQDPSR
QRTRSYAHCEDIVNAVDFKRHIEVLHYLLQVWPNPRWKISNLRPRVPLTSTSCLRQKDPP
CLALDILENEVVARNRCRGLESPPTNRYAGDWSICGQDYLLLPAGGMVDADYDEVAATDS
ENEEENLVLDLREGFLNQRETLFVGDFALVEGSEAVDLESPFSPRLNLKDFDALILDLER
ELSKQINVCL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcccctgctcaggaaaactttttccaggctcagagggaaggagaagctgaag
aggaaaaaatcggagcagaaggacagagatcgaccttccaaagcatcggaaactgttcct
gcatcctctgacctgaagcccttgcaagctgctcctcaggactcagaagaagtgtgcaag
aaaggcccaaacatcactgtttccagaaagcaaaactgggccaaagtttcctcctctgcc
agagatgactggattgctttcagtagaaagcttcgtagtggctctcacacctcgacagaa
cagtcagacaggcctggcaaacaaagcacccttccctcacgtcaactttctgatgtaggc
aaagaagctgaccagaagccctccaaagccacttctctttttaggagccgaagctgccca
caacgggcaaacagggaccatatgtattcctctggaacccatcatctacagcaggaagaa
gttcaggttagtgaaaagaattcaagacttgacttcttggcccccagtgtagacaaatct
cagtctaggcttgattccacagagatctgtgccacctctagtgtggtcaagtgtagcagt
tatggggcctaccttcagagtctggataggagcagccgggaatgggtactctcttctggg
aaggtcccagggttcgaggaaagcctaaggtttcccttgagctgccttggggagctgaag
gaatcaaacattgttgatgacgaaggagatatctggtacaaccccatccctgaggatgag
gaccaggcctgcgttctagacaaaaatgacccatggaaaagacggaacatgaggtacaca
gagatctttgagcctagtgctggagacagcaggacattaccaaatgccactgatccactc
aagaagactagtaacagtgttgggacatcgggcattccttggactctcaatggagggact
gagagctcctgcgacaaggctgctgttaattctcaggtggtattatcagaggcatcgtac
tcaacaactccagcagagggagatggctctcagaaagcagaggcctcgggttcttgtatg
cagaaaagcaccggtatatcccatacggacctcaaagtcccatcggagagttgtggcaag
gggaaatccccgggcacagtgcgcaggttgtccatgaagatgaaaaagcttccagagcta
cgcagaaagctcagcctccggtcaacccgagccagcaggcaggaccagagtgggggctcc
tcccctcaaaacctgcataaggagtctggcaacatcattagccgataccacctggacacc
agtgtgtcttccaaggagagcctgtggaaaagccggacccgtcacaaatcaaagtccacc
atcaagggtggttacctgagtgatggggattccccagagctcattgtcaaaacggagaaa
tgcagcgccaatgggcaagagaaggagcccttggactctcaagggggagcaggcgccaag
ttggactcggctgccttccgaccctacaatgtcagtgagcaccctcgctgtgtccagcac
ttatctggcctggtgaatgttcacctctatggcctacaagatgccaagtcccctaaggtg
gactccaaggacatcttctgtgccctgcaggtggatggggtcaacagggcccacaccgca
ctgctgccctgccgggctgccttcctcactctgaaccacaccttcaacctggagctggag
agctctcggttcctcaagctcgttgtcttctcctgggaccccagcacctgcaagaaccgg
gtttgctgctatgggaccatctgcttaccccagatttttaaaggctccagatgtcagcag
ctggctgtaaagctggaaccacgtggcttcctctataccaaactcaccttggtggagcag
tggcaagctcctcctgccgccacagcagccggcacccgcctagagcctcgagtttttgga
gtggagttgcgccagctggtggagagggaggattctgcagttagggtgcctctgcttatc
cagaagtgcgtctctgagattgagaagcgggggctaaaggttgtcgggctgtaccggctc
tgtgggtcggcagcagtgaaaaaggagctgcgcgatgccttcgagagggacagcagcgcc
gtggcgttatccgaagagctctacccagacatcaacgtcgtgacaggcattctgaaggac
tacctccgggagctgcccacccctctcatcaccaagaccctgtacgaggtggtactggaa
gccatgtcacgacggccgcctaggaggagagtagacggccaggagccagcatgcagctct
gaagaagagagcgtttcgctcttaaactgcttgccggagattgaaaaggccactctcacc
accctcttggatcatctgagtctggtgtcttcttatcatgagtataatcggatgacttcc
cagaacattgcggtatgctttggacctgtgctgctcaaccaaaaccaggatccctcgcgg
cagagaacccgaagttacgcacactgtgaggacattgtgaatgcagttgacttcaagaga
cacattgaggtgctccattaccttctacaggtctggccaaacccgagatggaagatttca
aatttgaggcccagggtgccattgacatccaccagctgtcttcgccagaaggatccaccc
tgcctggctctggacatcttggagaatgaggtggtggcccgcaaccgttgccgtggcttg
gagagtccacccaccaaccgctatgcaggcgactggagtatatgcggacaagactacctc
ttgttgcctgctggtggcatggtagatgcagactatgatgaggtggccgccacggacagt
gagaacgaggaggaaaatttggttctggacctaagggaaggcttcttgaaccagagggag
acactgtttgtaggagattttgcgttggtggagggctcagaggccgtggacttggagagt
cccttcagcccccgactgaacctaaaagactttgatgcattgatcttggatctggagcga
gaactttccaagcagatcaatgtttgcctgtga
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