Geotrypetes seraphini (Gaboon caecilian): 117350298
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Entry
117350298 CDS
T09159
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04136
Autophagy - other
gsh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117350298 (ATG4D)
04136 Autophagy - other
117350298 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsh01002
]
117350298 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117350298 (ATG4D)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117350298 (ATG4D)
Peptidases and inhibitors [BR:
gsh01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
117350298 (ATG4D)
Membrane trafficking [BR:
gsh04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117350298 (ATG4D)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117350298 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
117350298
NCBI-ProteinID:
XP_033780425
UniProt:
A0A6P8PZA9
LinkDB
All DBs
Position
16:49321043..49341526
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AA seq
482 aa
AA seq
DB search
MNTVWPGPTHLATTSQGESRQPQDRGLCVLQPAAPDKDCDKAFVREGSTLQNDLDEVDKL
KSKFMSAWNNMKYSWTMKTKPNFSKSSPLYLLGHHYLLANKEDTERFQKDFVSRLWFTYR
REFQPLEGTLWTTDCGWGCMLRSGQMLLGQGLLLHHLSRAWTCSDALFTSLMEREPQKSI
SPSKSTGPGLRTQERSWPPRGVSIQSHSASPADPVKEALHRKIISWFSDHPRAPFGVHQL
VELGKSSGKRAGDWYGPSIVAHIIRKAVEGTSEVSELSVYVSQDCTVYKADVEQLLGWDV
VPCGPRKAVIILVPVRLGGETLNPIYMDCVKEILRLESCIGIIGGKPKHSLYFIGYQDEF
LLYLDPHYCQPFVDPAKESISLESFHCNSPQKIAFSKMDPSCTIGLYARSRQEFSVLCEQ
LTKALNSSSVKERYPVFTFVDGHAQEYGLDNVCTPSERAGPTPKAGARGKAKRPSADEFV
FL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgtctggcctggcccaacccatctggcaaccacgagccaaggagaatcgcgc
cagccccaagaccgagggctgtgcgtgctgcagcctgccgcccccgataaggactgtgac
aaggcgtttgtcagggaagggagcaccctgcagaatgacctggatgaagtggacaagctg
aagagcaaattcatgtcggcatggaacaacatgaaatacagttggaccatgaaaacaaag
ccgaacttcagcaaatcctcacccctctacctgctgggccatcattacctcctagctaac
aaagaggacaccgagaggttccagaaggactttgtgtcccggctctggttcacgtatcgg
cgggagttccagccactggagggtacgctgtggacgacagattgtggctggggctgcatg
ctgcgcagtgggcagatgttactgggccaaggtctcctactgcaccatctgtccagagcc
tggacctgctctgatgccttgtttaccagcctaatggagcgggaacctcagaaaagcatc
tccccctcgaaatccaccggcccaggcctcaggacacaggagaggagctggcctccgaga
ggcgtttccatccagtcacatagtgccagtccggcggacccggtgaaagaagctctccac
cgcaaaattatctcatggttctcggatcaccccagggccccgttcggggtgcatcagctg
gtcgagctggggaaaagctcagggaagagggcaggagactggtacggcccctccatcgtt
gctcacataatcaggaaagcggtggaagggacgtcggaagtctcggagctctctgtctat
gtttctcaggactgtaccgtgtataaagcagacgtagagcagctcttgggctgggacgtt
gtaccgtgtgggcccagaaaagctgtgataattctggttccggtccgtctgggaggagag
acgctgaatcccatctacatggactgtgtgaaggagatcctgaggctggaatcctgcatc
gggatcatcggagggaaacccaaacactcgctttatttcatcggctatcaggatgagttc
ctcttatacctggacccacattactgccagccttttgtggaccctgccaaagagagtatc
tccctagagtctttccactgtaactctccacagaagatcgccttcagcaagatggacccc
agctgtaccattggcttgtacgcccgcagccggcaggagttcagcgtgctgtgtgagcag
ctcaccaaggctctgaattcatcctctgtgaaggagaggtatcctgtgtttacctttgta
gatggtcacgctcaggagtacgggctggacaacgtttgcacaccctcagaacgggccggg
cccaccccaaaggcaggagcaaggggaaaggctaagcgacccagcgccgatgagtttgtc
tttttataa
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