Geotrypetes seraphini (Gaboon caecilian): 117350388
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Entry
117350388 CDS
T09159
Symbol
KHDC4
Name
(RefSeq) KH homology domain-containing protein 4 isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117350388 (KHDC4)
Spliceosome [BR:
gsh03041
]
Complex B
Other components
Prp19-related factors
117350388 (KHDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
KH_1
DUF5023
Motif
Other DBs
NCBI-GeneID:
117350388
NCBI-ProteinID:
XP_033780554
UniProt:
A0A6P8P9U2
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All DBs
Position
16:37946553..37964286
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AA seq
620 aa
AA seq
DB search
MSAGSGRASGGRRSKWDQPGPPASSLFSPGAMAGLVLPVGPQPTGFFPGCADAMIGNPGG
EGVAAPSGALDAAAAVAAKINAMLIAKGKLKPSQASTDKSQVPWKGTPNKSKDDLVVAEV
EINDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTTEEKAKIGPGDRPLYLHIQGQS
RDLVDRAVNRIKEIITNGVMKAATGSCPTFNGATVTVYHQPAPVAQLPQARQKPAFPSGM
HYVQDKLFVGLEHAMLTFNVKEKVEGPGGSFLQHIQVETGAKVFLRGKGSGSIEPASGRE
AFEPMYIYISHPKPEGLAAAKKLCENLLETVHAEYSRFVNQINTAVPLPGYAQAPAISTI
PPQPQFYPCNGYQSGYPVIATPQQPTPLPYVVPSTVAPVVPLAPGILPAVQTAVPPVPTQ
YPIPQIQPPANAMQAPLTNPYVPVTASAVPLKHFVTPAMQPPGVSQAQKRRFREELPEER
DGGLLGYQHGPIHMTNLGIGFPGHSDNVGAVARPAGSSGKERERDRQLMPPPILPMTGRK
SDLEDQNGSGASGIHDYPLKKLKTEKGFGLVAYAGDSSDEEEEHSMHKHASTLSQGWNFG
YQYPASQQQAKQHMPFWMAP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctggcagcggtcgggcgagtggcgggcggcgcagcaaatgggaccagcctggt
ccacctgcctcatctctcttttctcctggtgcaatggcagggttagtcttacctgttggg
cctcagcctactggattttttccaggctgtgcagacgctatgataggaaatcctggaggt
gagggtgttgctgcaccctcaggagcactagatgctgctgcagctgtggcagctaaaatt
aatgctatgttaatagcaaagggaaaattaaagccatcccaggcttcgactgacaagtca
caggtaccatggaaagggacaccaaacaaaagcaaagatgacctagttgtggcagaagtg
gagatcaatgatgttccgctgacctgcagaaatctgttaacgcgaggacagacccaagat
gagataagtcgattgagtggagcagccgtgtctactcgaggaagatttatgactacagag
gagaaagccaaaattggacctggggaccgtccactttatctgcacattcaaggccagtcc
cgggatctggttgacagggctgtaaaccgtattaaagaaatcattaccaatggtgtaatg
aaagctgctactggttcctgtcctactttcaacggagccacagtgacggtctatcaccag
cctgcccctgtcgcccagctcccacaagcccgtcagaagccagcattcccatcaggaatg
cactatgtacaggacaaactctttgtgggtttggaacacgctatgctgacatttaacgta
aaggagaaagtggaaggtccaggtggctcctttttgcagcacatacaggttgaaactgga
gccaaagtgttcctccggggaaaagggtctgggtccatagagccagcgtccggcagggaa
gcctttgaacccatgtacatctatatcagtcacccaaaaccagagggcctagctgcagcc
aaaaaactctgcgagaacttattggaaacagttcatgcagaatattctcgctttgtaaat
cagatcaacacagccgtcccattaccagggtacgcgcaagccccagctataagcactatc
ccacctcagccgcagttttatccctgtaatggataccagtctggttacccagtaattgca
acgcctcagcagccaacaccattgccttacgtagtaccaagcacggtagcaccagttgtg
ccattggcacctggcatcctgccagctgttcagactgctgtcccacccgtgccgactcag
tacccgataccacagattcagcctccggctaatgctatgcaggctccactgaccaaccct
tatgttcctgtcactgcttctgccgtccccttgaaacattttgtgacaccggctatgcag
ccaccaggtgtgtctcaagcacagaagagacgcttcagagaggagctgccagaggagcgg
gatggtggactacttggatatcagcatggacccattcatatgactaatttaggtataggc
ttccctggtcacagtgacaacgttggagcagtagcaaggccagctggttcctcgggcaag
gagagagagagggacaggcagctgatgcccccaccaatcctaccaatgacaggacggaaa
agcgatttagaagatcagaacgggtcaggggcttcaggcatccacgattacccacttaag
aagctgaaaacggagaaaggatttggcttagtggcttacgcaggtgattcatcagatgag
gaagaggagcacagcatgcacaaacatgcaagtaccctttcccaaggctggaattttggc
taccagtatcctgcatctcagcagcaagcaaagcagcacatgcctttctggatggcaccc
tag
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