Geotrypetes seraphini (Gaboon caecilian): 117350530
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Entry
117350530 CDS
T09159
Symbol
GTF2F1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117350530 (GTF2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117350530 (GTF2F1)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
117350530 (GTF2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
117350530
NCBI-ProteinID:
XP_033780721
UniProt:
A0A6P8Q086
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All DBs
Position
16:46444637..46459929
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AA seq
544 aa
AA seq
DB search
MHNVIEEMSLTEWQIPDAGLKGSSGQSVTEYMVRVPKSTTKKYNVMAFNAADKINFSTWG
QAKMERDISNKKMYQEEEMPDSGAGSEFNRKQREEARRKKYGIVLKEFRLEDQPWLLHVN
GKTGRKFKGVKKGGVTENASYYIFTQCPDGAFEAFPVNNWYNFTPMAKHRTLTAEEAEEE
WERRNKVLNHFLIMQQKRLKDVDEEEEEEKEKKEKKKKKKSSDLKIHDLEDDLEMSSTES
EDSGEESTVQEKKPKAKKKAAGVKKQKKKKKGSSDDEALEDSDDGDFEGQEVDYMSDQSS
SSADELPGKEEQNKEEVVPKGIDEDNESSEDSDEEKPPEEKEDEEEEKKGPTTQEKKKKK
DGEDSSDESDTSEESDIDSEASSALFMMKKKTPPKKEKKGSASSSRANSRPSTPTVEAGN
TSSTLRAAANKLEQGKRQGVSADTPAAKRLRLDAGPQNTSGKSTPQPQSGKSTPSSGDVQ
LTEEAVRRYLTRKPMTTKDLLKKFQTKKTGLSSEQTVNVLAQILKRLNPERKKISEKMHF
FLKE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcataatgtgattgaggagatgagtttgacagaatggcagattccagatgcaggactc
aaaggctcgagtggtcagtctgttacagaatacatggtgcgagttcctaaaagcacaaca
aagaagtacaatgtgatggccttcaatgctgctgacaaaatcaacttttccacatggggc
caggctaaaatggaacgagatattagcaacaaaaagatgtaccaggaggaggagatgcct
gactcgggggctgggagtgagtttaatcgcaagcagagagaagaagctcggcgcaagaag
tatggtattgttctgaaggagtttcgcctggaagaccagccctggctgcttcacgtaaat
ggcaagacaggtcgcaagtttaaaggggtgaagaaaggaggtgtgaccgaaaacgcttcc
tattacatctttacacagtgtcctgatggcgcgttcgaagccttccctgtgaacaactgg
tataattttactcctatggccaaacacagaacactgacagcagaagaggctgaggaagag
tgggaaaggagaaacaaagtgctgaaccatttcctgatcatgcagcagaaacgtctgaag
gatgtagatgaggaagaggaggaggaaaaggagaaaaaagagaaaaagaagaagaagaaa
agcagtgatctaaaaatccatgatctggaggacgacctggagatgagctccacagaaagt
gaagacagcggcgaggagagtaccgtgcaagagaagaagccaaaggctaagaagaaagca
gctggtgtgaagaagcagaagaagaagaagaaggggtcatcggatgatgaggccttggag
gacagcgatgatggagactttgaggggcaggaggtcgactatatgtctgatcagtccagc
agttcagcagatgaattaccagggaaagaggagcagaataaggaagaagttgtgccaaaa
ggcattgatgaagacaatgaaagcagcgaggacagtgatgaggaaaaaccccctgaagag
aaggaggacgaggaagaggagaaaaaagggcccacaacccaggagaagaagaagaaaaaa
gacggggaagatagcagtgatgaatcggacacatctgaagagagcgacattgacagtgag
gcttcttcggcactcttcatgatgaagaaaaaaacccctcccaagaaggagaagaaaggg
tcagccagcagttcaagggcaaacagccgccccagcactcccacagtggaggcaggaaac
acatcttcaactctgcgtgcagcagccaacaagctggagcaaggcaaacgacagggggtt
tctgcagacaccccagcagccaagaggctccgcctagatgctgggcctcaaaatacatct
ggcaaatccacacctcaaccacagtctggcaaatccacccccagcagcggtgatgtgcag
ctgacagaggaggcagtgcggcgctacttaacacgcaaaccaatgaccaccaaggatctg
ctgaagaagtttcagaccaagaagacggggctgagcagtgagcagacagtgaatgtactg
gcacagattctaaaacggctgaaccccgagcggaagaagattagtgagaagatgcacttc
tttttgaaggagtaa
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