KEGG   Geotrypetes seraphini (Gaboon caecilian): 117350553
Entry
117350553         CDS       T09159                                 
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013  Nucleocytoplasmic transport
gsh03015  mRNA surveillance pathway
gsh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117350553 (RBM8A)
  09122 Translation
   03013 Nucleocytoplasmic transport
    117350553 (RBM8A)
   03015 mRNA surveillance pathway
    117350553 (RBM8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsh03019]
    117350553 (RBM8A)
   03041 Spliceosome [BR:gsh03041]
    117350553 (RBM8A)
Messenger RNA biogenesis [BR:gsh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117350553 (RBM8A)
Spliceosome [BR:gsh03041]
 Complex C
  Other components
   EJC/TREX
    117350553 (RBM8A)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_occluded
Other DBs
NCBI-GeneID: 117350553
NCBI-ProteinID: XP_033780761
UniProt: A0A6P8Q0C9
LinkDB
Position
16:complement(40052332..40061986)
AA seq 176 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSDEGSRARVREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYALVE
YETYKEALAAMEGLNGQELMGQAVNVDWCFVRGPPRGKRRGGRRRSRSPDRDRRRR
NT seq 531 nt   +upstreamnt  +downstreamnt
atggcggacgtgctggatctccacgaggcgggaggcgaggatttcgctatggacgaggat
ggcgacgaaagcattcacaagctgaaggagaaagccaagaagaggaaaggaagaggattt
ggttcagatgaaggttccagggcccgggtgcgtgaggattatgatagtgtggaacaggat
ggagatgagccaggtccacagagatcggttgaaggctggattctgtttgtaacgggagtg
catgaagaagccacagaagaggatatacacgataaatttgctgagtatggggagataaag
aacatccacttgaatttggacagaagaacaggttatctgaaggggtatgccctagtggaa
tatgaaacctataaggaggcactggccgctatggaagggctgaacggccaggaactgatg
ggacaggcggtcaatgtagactggtgttttgtcaggggacctccaagaggaaaacgaagg
ggaggacgcagacggagcaggagccctgatagggacagaaggcgtcgttaa

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