Geotrypetes seraphini (Gaboon caecilian): 117350692
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Entry
117350692 CDS
T09159
Symbol
APEX1
Name
(RefSeq) DNA repair nuclease/redox regulator APEX1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117350692 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117350692 (APEX1)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117350692 (APEX1)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117350692 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
117350692
NCBI-ProteinID:
XP_033781078
UniProt:
A0A6P8Q1W7
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All DBs
Position
16:11037597..11046066
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AA seq
322 aa
AA seq
DB search
MPKRGKKKEVEEETVNVECQEQDGNEQVAKKSKKGGGSKATKESEGPSIYEDPPEKLTCS
AGKKSNLKITSWNVDGLRAWVKKKGLDWVRQENPDILCLQETKCAEKALPNEIKDMPEYP
NKYWACSDDKEGYSGVAMLCKDLPLNVSFGIGVEEHDKEGRVITAEFKDYFLVAAYVPNS
SRGLVRLDYRQKWDVDFRAYLKGLDGQKPLILCGDLNVAHQEIDLKNPKTNKKTAGFTPQ
EREGFGTLLGEGFVDSFRHLYPDVPYAYTFWTYMMNARGKNVGWRLDYFLLSKALLPKLC
DSKIRSKIMGSDHCPITLYLAM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtgggaagaagaaggaggtggaggaggagactgtgaatgttgagtgtcag
gagcaggatggaaatgaacaggtagcgaaaaagagcaaaaagggaggagggtccaaagcc
acgaaggagtcggaagggccatccatatacgaggatccccctgaaaagctgacctgttct
gcagggaagaaaagcaacctcaagatcacctcctggaacgtggacgggctgcgggcctgg
gtaaagaagaagggcctggattgggtgcggcaggagaatccggacatcctgtgcctacag
gagacaaaatgtgctgagaaggccttgccgaatgagatcaaggatatgccggagtacccc
aacaagtactgggcctgctcagacgacaaggagggttacagtggtgtggccatgctttgt
aaggacttgccactcaacgtttcctttggcattggagtggaggaacatgacaaagaagga
cgtgtcatcacagcagaattcaaggactacttcctggtggcagcctacgtgcccaattcc
agtcgtggcctggtacgcctagactatcgtcagaagtgggatgtggatttccgggcatac
ctgaagggtctagatgggcagaagccccttatcctctgtggagacctcaatgtggcccac
caggagatcgacctcaagaatcccaaaactaataagaagacagctggattcacaccacag
gagcgggagggtttcggcaccctgctgggggaggggtttgtggacagcttccgccacctc
tacccggatgtcccctacgcctacaccttctggacttatatgatgaatgcccggggcaag
aatgtgggttggaggcttgattacttcctgctgtccaaggccttgcttccaaagctctgt
gacagcaagatccgttctaagatcatggggagtgaccactgtcccatcacactgtacttg
gccatgtga
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