Geotrypetes seraphini (Gaboon caecilian): 117350750
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Entry
117350750 CDS
T09159
Symbol
PUM3
Name
(RefSeq) pumilio homolog 3
KO
K14844
pumilio homology domain family member 6
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117350750 (PUM3)
03009 Ribosome biogenesis [BR:
gsh03009
]
117350750 (PUM3)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117350750 (PUM3)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117350750 (PUM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
LTN1_E3_ligase_6th
HAAS
Arm-DNA-bind_2
Motif
Other DBs
NCBI-GeneID:
117350750
NCBI-ProteinID:
XP_033781194
UniProt:
A0A6P8PBN2
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All DBs
Position
1:complement(478203279..478345854)
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AA seq
648 aa
AA seq
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MEAKSKKQFKGKGGKASHGKSKSRKVADGSGPKKFQTKANEKGKLNFKSKKFEKGKKSEK
TGGKAITKQFVAMHRQKDNLRKRKFQENDLENKPDSKKPKWDDFKKKKKELKQTRQLNDK
NNYDVIIKSKQIWESIRRKDCTKDKRGKLMKDLQQLLQGNIKSIAFAHDSTRIIQSYIQF
GSKSQRQEIFEELKEHLIELSKSKYGRNIVKKFLMYGSKQQIAEIIRNFKGQVRKMLRHS
EASNVVEYAYNDKAILEQRNMLTEELYGNTFLVYKSVVHPTLAKVLEAHPDKQEAITEEM
KQILTPMAQKEAVIKHSLVHKVFLDFFTHAPAKLRTEMIEAIREALIYMAHTHDGARVAM
HGIWHGTPKDRKVIVKTMKTFVEKIATGEFSHLVLLAAFDCIDDTKLVKQLIISEISSNL
SALVNNKYGRKVLLYLLSPRDPAHFVPEIIKVLQQGDKNDHSKKDAEIRHQELLEAISPP
LIKYLQENAQEMVMDKATCVLVANILESAHGDFQPVMDSIADLAAEEFVPGGKDGKLHMA
EHPAGHLVLKWLIEQDKKIEEKKKEGCFARTLVEHVGIERLKSWTEVNRGAIVLCCLLES
TDKEVAVMVKNGLKSLVPKLQNNKNIKGIGALLERLTSSYCGSETRNV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaagagtaaaaagcagttcaagggaaaaggtggaaaggcatcgcatggaaaa
agtaaatccagaaaagttgctgatggaagtggtcccaaaaaattccagaccaaagctaat
gagaaggggaaacttaatttcaagtccaagaagtttgaaaaagggaagaagtctgagaaa
acaggtggaaaagctataaccaagcagtttgttgctatgcacagacagaaggataattta
cgaaagaggaagttccaggagaatgatctggagaacaagcctgattccaagaaacctaag
tgggatgactttaaaaagaaaaagaaggaattaaaacagaccaggcaacttaatgacaaa
aacaactatgatgtcatcattaaatccaagcagatctgggaaagtattaggagaaaggac
tgtaccaaagataagcgaggaaaactgatgaaagacctccagcaacttctccaggggaac
attaagagtattgcctttgctcatgattcaactcgtatcatccagtcttacattcagttt
ggcagtaagagccaaaggcaggagatttttgaagaattaaaagaacatttgattgagttg
agcaaatctaagtatggaaggaatattgtgaagaaatttctcatgtatgggagtaaacaa
caaatagcagaaataataagaaacttcaaaggtcaagtgagaaagatgctgcgtcattct
gaggcctccaatgtagtggagtatgcatacaacgacaaggccattttggagcagaggaac
atgctgactgaggagctctatggaaacaccttcctagtgtacaagtctgttgttcaccca
acattggctaaagttttggaagctcatcctgacaagcaagaagccatcacggaggaaatg
aaacaaattcttacaccaatggcacaaaaggaggctgtcatcaagcactcattagtgcac
aaagtattcttggatttttttacacatgccccggcaaaactaagaacagaaatgattgag
gcaatccgagaagccctgatctacatggcacatacgcatgatggtgcccgagttgccatg
catggaatatggcatggcacacctaaggacagaaaagtcattgtgaaaactatgaagacc
tttgttgaaaaaattgccacaggtgaattttctcacttagtcttactggctgcctttgac
tgtattgatgacactaaacttgtgaagcaactaatcatttctgagatcagcagcaacctc
tccgctcttgtaaacaacaagtatggaaggaaggttctcctgtatttgttgagcccaaga
gaccctgcacattttgtaccagagatcatcaaagttctgcagcaaggtgacaagaacgat
cacagtaagaaagatgcagaaatccgccatcaggagctcttggaagctatttctcccccc
ttgataaagtatctacaagaaaatgcccaagaaatggttatggacaaagccacatgtgtc
cttgttgccaatattctagaatcagcacatggtgactttcagccagtcatggattctatt
gcagatctggcagcagaagaatttgttccaggtggcaaggatggaaagcttcacatggca
gagcatccagcaggccatctggttctgaaatggttaatagaacaagacaagaagatagaa
gaaaagaaaaaggaagggtgctttgcaagaacattggttgaacatgtgggtattgagaga
ctgaagtcctggacagaagtcaaccgtggagctattgttctgtgttgtcttcttgagagc
actgacaaagaagttgcagtgatggtgaagaatggactgaagagccttgtaccaaaactg
caaaacaataagaatataaaaggcataggtgctttacttgaacgactgacttcttcatat
tgtggcagtgagacaagaaacgtgtaa
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