Geotrypetes seraphini (Gaboon caecilian): 117350756
Help
Entry
117350756 CDS
T09159
Name
(RefSeq) transcription factor HES-1-like isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03460
Fanconi anemia pathway
gsh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117350756
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117350756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117350756
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117350756
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
117350756
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
117350756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
Motif
Other DBs
NCBI-GeneID:
117350756
NCBI-ProteinID:
XP_033781204
UniProt:
A0A6P8PBN8
LinkDB
All DBs
Position
16:841397..855019
Genome browser
AA seq
313 aa
AA seq
DB search
MFIHYFFHPVTQAPLSADCLTQPRPQTEMSSSSQHTLKDPSVLLSFPAVLQNWIGLQMCK
GAPLPPPSSKAPERVRMDFTPTSENLHLGDAPARHKMSPTIYKKSVKPLIEKRRRARINA
SLGQLKQLLLQMPLAQNSRTCRLEKADILELTVRQMEKLKTSGQDFMAGFSHCRRAVTAF
LDSAATLDSCVKSQILAHLELAQTNPALTGTGSSHCADAKAWGEKGQPIASALREEKAQE
VCEQGPPLGLARNIPHQSYSTPIWHSPTCVPQWPSQYYTSAASLPSYSSATCHLACWRSV
SAPGILLPVWRPW
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtttatacattatttttttcatcctgttactcaagcacccttaagtgcagactgctta
acccagccccggccacagacagagatgtcctcctcttcccaacacaccctgaaagacccc
agtgtgctgctgtcattcccagccgttcttcagaactggataggactgcagatgtgcaaa
ggagctcctctccctcctccttcttcaaaagcaccagagagagtcaggatggactttact
cctacttcagagaacttacatcttggagatgctcctgccagacataagatgtcccccacc
atctacaaaaagtccgtcaagcctctgattgagaagcgacgccgtgctcggatcaatgcc
agcctgggccagctgaagcagcttcttctgcagatgcccctggcacagaactcaaggact
tgcagactggaaaaggccgatatcctagaactgactgtaaggcagatggaaaagctgaag
acatcagggcaagacttcatggctggattcagtcactgtcgtagggccgtgacagcattc
ctggactctgctgccactctcgactcctgtgtgaaatcccagattctggcccatctggag
ctggcccagaccaaccctgctcttactggcactggttccagtcactgtgcagatgctaag
gcatggggggagaagggacagccgattgcttctgcgcttcgggaagagaaagcacaggaa
gtgtgtgagcagggtcctcctctgggactggccaggaatattccgcatcagtcctactct
accccaatctggcacagtcctacctgtgtgccacagtggccctctcagtactatacctct
gctgccagtcttccttcatactcttctgcaacatgccatctggcatgttggaggtcagtc
tctgcccctggtatcttgcttcctgtatggagaccttggtaa
DBGET
integrated database retrieval system
