Geotrypetes seraphini (Gaboon caecilian): 117350760
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Entry
117350760 CDS
T09159
Symbol
THBS3
Name
(RefSeq) thrombospondin-3
KO
K04659
thrombospondin 2/3/4/5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04145
Phagosome
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117350760 (THBS3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117350760 (THBS3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117350760 (THBS3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117350760 (THBS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117350760 (THBS3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117350760 (THBS3)
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117350760 (THBS3)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Phagocytosis
Opsonins
117350760 (THBS3)
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117350760 (THBS3)
Exosomal proteins of colorectal cancer cells
117350760 (THBS3)
Exosomal proteins of bladder cancer cells
117350760 (THBS3)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117350760 (THBS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF
EGF_MSP1_1
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
117350760
NCBI-ProteinID:
XP_033781213
UniProt:
A0A6P8Q285
LinkDB
All DBs
Position
16:complement(37293779..37321473)
Genome browser
AA seq
961 aa
AA seq
DB search
MEHTGPSGPGRLLLILLVALWPETSARQELQVVDLLTVSEARQMASVVDKIRTEMLAVND
LYLISTFRLPPKLGGLLFGLYSKKDNTKWLEVSIVGKLNKVLLRYVREDSKLHAVSLQNA
NLADGRSHSLIVRMSGLRRDTLSLELYMDCKQVDSSVGLPDLMVIPPAEVESVEIRTGHK
AYLRMQGAIESMKLILGGSMARVGALSECPFQEDESIQNTVNGVINSILGDQTKALVRQL
ALFNQVLMELREDIRDQVKEMSLIRNTIMECQVCGFHDHRSRCNPNPCFHGVDCMETYEY
PGYRCGPCPPGFKGNGTHCSDIDECSHANPCFSGSKCINTAPGFRCELCPWGYKGNIISG
VGVDYAKASKQICTDIDECNDGNNGGCVANSICTNTVGSFKCGPCRTGFIGNQSLGCMPK
KSCVSPAFNPCDVNAHCVFERNGEVSCACNVGWAGNGHVCGHDTDIDGYPDQPMPCIDND
KHCKQDNCPLTPNSGQEDADNDGIGDQCDEDADGDGIRNVEDNCRLVPNKDQQNSDTDSF
GDTCDNCPNVANNDQKDTDSNGEGDTCDNDIDGDGIPNMLDNCAKVPNPLQTDRDEDGVG
DACDSCPEISNPTQTDADSDLVGDMCDTNEDSDGDGHQDTKDNCPQIPNSSQLDSDNDGL
GDDCDEDDDNDGIPDYIPPGPDNCRLIHNPNQKDSNGDGVGDICEEDFDNDTVTDPLDVC
PESAEVTFTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGV
DFEGTFHVNTITDDDYAGFIFSYQDSASFYVVMWKQTEQTYWQATPFRALAEPGLQLKAV
KSKTGPGEQMRNALWHSGHTPEQVRLLWKDPRNVGWKDKTSYRWQLMHRPQVGYIRVKLY
EGRSLVADSGVIIDTSMRGGRLGVFCFSQENIIWSNLQYRCNDTIPEDFEPYRRFLLEGR
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggagcatacggggccatcaggaccaggacgcctactgctgattctcctcgtggctctg
tggccagagacgtcggcccggcaggaactgcaagtggtagacctccttaccgtcagcgag
gctagacagatggccagcgtggtggataagatcagaaccgaaatgctggcggtgaatgac
ctgtacctcatcagcacctttcgcctgcctccaaagcttggggggctgctctttggactc
tactcaaagaaggacaacaccaagtggttggaggtttccatcgttgggaagctcaacaaa
gttcttctgcgctacgtgcgggaagacagcaaactccatgcggtcagcctgcagaatgcc
aacctggcggatgggcggagtcacagcctgatcgtgcggatgagcggcctgcgccgggac
acgctttccctggagctctacatggattgcaagcaggtggactccagtgtggggctcccg
gacctgatggttatccctccggcggaggtggaatctgtggaaattcggacaggtcacaaa
gcataccttagaatgcagggtgccatagagtccatgaagttaattctggggggatccatg
gctagggtcggagccttgagcgagtgccccttccaggaagatgaatctatacagaacaca
gtgaatggcgtgatcaattctatcctaggggatcagacgaaggccttggtccggcagctg
gccctcttcaaccaggtgctgatggaactaagagaggatatcagagaccaggtgaaggag
atgtctttgatccgaaacaccatcatggagtgccaggtgtgtgggttccacgaccatcgg
tctcgctgtaaccccaacccctgctttcatggcgttgactgcatggagacttatgaatat
cctggttaccgctgtggaccttgccctcctggcttcaagggaaatggaacacactgctct
gacattgatgagtgttctcatgctaacccctgcttctcaggctccaagtgcataaacaca
gctcctggattccgctgtgagctctgcccttggggctacaagggtaacatcatttctgga
gtcggagtggactatgccaaagctagcaagcagatttgcacagatattgatgaatgtaat
gacggaaataatggaggctgtgttgcgaactccatctgcacaaatactgtgggctccttt
aagtgtggcccctgcaggacgggcttcattgggaaccagagtctgggctgcatgcccaag
aagtcctgtgtcagccctgccttcaacccctgtgatgtgaatgcacattgtgtgtttgag
cggaatggcgaggtctcttgcgcgtgcaatgtgggctgggcagggaatggtcatgtgtgc
ggccacgacactgacatcgacggatacccagatcaaccaatgccctgcatagataatgac
aaacactgcaagcaggataactgtcctctgactccaaactctgggcaggaggatgcagac
aatgatggtatcggggaccagtgtgatgaggacgcagacggggatgggatccggaatgtg
gaggataactgtcgcctggtcccaaataaagaccagcagaactcagatacggactccttt
ggcgatacctgtgacaactgccccaatgttgccaacaatgaccagaaagacacagacagc
aacggagaaggggacacgtgtgacaacgacattgatggggatggtatacctaacatgctg
gacaactgcgccaaggtgcccaaccctttgcagacagaccgggatgaggatggagtgggg
gatgcctgcgacagctgtccagagatcagtaacccaactcagacagatgcagacagtgac
ctggtgggagacatgtgtgacactaatgaagacagtgacggggacggtcaccaggacaca
aaggataactgcccacagatccccaacagttcccagttggactcggacaacgatggtttg
ggagacgactgtgacgaggatgatgataatgatgggataccggactacattcctccggga
cctgacaactgccgtttaatccataaccccaaccagaaggattcaaatggagacggggta
ggagatatctgcgaggaggattttgacaacgacacggtgactgaccccctggatgtgtgt
cccgagagtgcagaggtcaccttcacagacttcagggcctatcagacagtcatactggac
cccgagggagatgctcagattgatccgaactgggttgttctgaaccaggggatggagatt
gtccagacgatgaacagtgaccctggcctggcggtaggctatactgctttcaatggcgta
gactttgagggcaccttccacgtgaacaccataacagatgacgattacgccggtttcatc
tttagctaccaagatagcgccagcttctatgtggtcatgtggaagcagacggagcagacg
tactggcaggccacgcccttccgagccctggcagagccgggactgcagctcaaggctgtc
aagtccaagacaggtcctggggagcagatgcggaatgcactgtggcattcgggtcatact
ccagaacaggtgaggctgctgtggaaagacccccgaaacgttggctggaaggacaagact
tcgtaccgctggcagcttatgcacagaccccaagtgggctacatcagggtgaagctctac
gagggtcggagcctcgtggccgattccggggtgatcatcgacaccagcatgaggggaggc
cgcctgggtgtcttctgcttctctcaggagaacattatctggtccaacctgcagtaccgg
tgtaacgacacaattcctgaagacttcgagccttaccggaggttcttgctggaagggagg
gagtga
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